Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                     <-----------HVH21                                         ------                                 ------>ZmHOX2a(2)                                            <------                                <---------At4g35610                                           -------                                <---------GLK1(1)                                            <-------                               --------->ARR11(3)                                      <-----------ARR10                               <---------AGP1                                        ------>NtERF2                      ==================HOX2a_HOX2a                    ------>ZmHOX2a(2)     --------                      <------ZmHOX2a(1)<---------ANAC46     <---------YAB1          --------->DEAR3(1)              <------ZmHOX2a(1)--------->ARR14(2)           <---------ANAC46      <---------ATERF1(1)              ==========================HOX2a_HOX2a         --------->ICU4  <------ZmHOX2a(1)<-------        <---------HSFB2a(2)    <---------ARR14(2)<-----------GT1   <---------ZAT6<---------DEAR3(1)   cttgtgagtttgagaaggagaagaggacgtttggatctgcgtcgtagagttttactcttgtgatgtttagtgatcgaaggagcacggcgactcttgccgg  11760700       <--------P      <-------GAMYB     <------MYB83     <---------MYB46(3)     <------MYB46(1)                                                                             <---    <---------AtMYB61                                                                            ---- --NtERF2                                                                                       <---- --->LBD16                                                                                   -------- ---ANAC46<---------ANAC58                                                             --------->ANAC46 -->ETT(1)<---------ANAC58                        --------->AHL20(2)                   --------->ANAC58 --LBD16<---------MYB46(3)                      <----------DOF2                        --------->ANAC58 --------->AGL1                       <---------ALFIN1                               <---------ALFIN1 ----------AGL1<----------DOF2      <---------ALFIN1         <---------REM1(2)     --------->ANAC46   agatgggaggttgtttgctatttggccgtagttgattcccacaccttgccctttaattctctctacatagaacaaaaaaaaaaacacacacccaattaga  11760800                                                       --------->TOE2(2)                                                       --------->TOE1(2)                                                      ----------->RAV1(2)                                                    <---------GLK1(1)                                                  <------ZmHOX2a(1)     <---------REM1(1)                         <------ZmHOX2a(1)                    <---------GLK1(1) --------ARR10                               --------->ALFIN1                      --------->ARR11(3) ----->GLK1(2)                              <------ZmHOX2a(1)             <------ZmHOX2a(1)  >>>>>>>> -----GLK1(2)                             --------->ALFIN1          ---------->DOF2<---------ARR11(3) ->YAB1         <-----------GT1          <------ZmHOX2a(1)    ----------->GT1<------ZmHOX2a(1)     <-   atctaagttgaagcaaatttacatgctcaaaacaaatattgaaggaggaggaggaaacctgagagagtaagaaagaggaggagaagaactctgaagaaga  11760900                                        <---------O2                                        --------->O2                                     --------->ANAC46                          --------->GLK1(2)               ------>ZmHOX2a(1)     <----------DOF2                          --------->ARR14(2)             <---------ALFIN1    ---------->ID1                         <---------GLK1(2)           <---------At4g35610    <-----------GT1                       --------->ANAC58 --------->bZIP60(1)             <----------DOF2          --------->ALFIN1<-----------ARR10  <---------MYB52(1)       ---------->ID1 >TBF1    <-----------RAV1(1)   ------>ZmHOX2a(1)  <-----------GT1<----------DOF2 -----ZmHOX2a(1)       --------->ANAC58 <---------bZIP60(1)     <------------------------ANAC81   aggagagactatgtgtggccatggcaagaatctccttctacgacgtcgtttttttagctcctcttcttctttttcttttttccttttgagttttagtttt  11761000                                                                          --------->SPL7                                                                          <-------TEIL                                                                      --------->LBD16                                                                    <---------LBD16                                                                 <----------DOF2                    <---------DEAR3(1)                      <---------ANAC58                  --------->CCA1(2)                         <---------ANAC58           --------->CCA1(2)                               --------->MYB52(2)                   -----          <---------ARR11(3)                     <----------DOF2<---------ANAC58              -------          --------->AHL20(1)              <---------At4g35610   <---------ANAC58            <--------     <---------TOE2(3)                   <-----------GT1 <---------MYB52(1)               -------->P   tggtattaagaatatataagagacggtggaatttggaaagtttcaactgttctttcttcgtttcttgctttccgcgttcgtcaaatagctctaaccaggt  11761100                                                                              <-----------------AGL3                                                                              <-----------------AGL1                                                                              <-----------------AGL2                                                                              <-----------------AG                                                                         <-----------GT1      *TSS                                                          ---------->ID1      <---------ICU4                                         <---------AHL20(1) <----------DOF2     <---------YAB1                                    --------->ANAC55(2)    ----------------->AGL1 ---->ALFIN1  --------->ARR14(2)                       <---------ANAC55(2)    ----------------->AGL2 -->ZAT2      <---------ARR14(2)                 <-------TEIL--------->AHL20(2)--------------->AGL15 ---RAV1(2)  <----------TaMYB80        ------>ZmHOX2a(1)     <---------AHL20(2)<---------------AGL15   gtctctcattaatgcatatacctatgcctaaacttatattcctatattacatacattacatattttatttgtttttttcttccttttttggtatcaagtt  11761200                                ---------->DOF2                            --------->AHL20(2)                           --------->AHL20(2)                           <---------AHL20(2)       --------->ARR11(3)                    --------->ANAC58                <---------ARR11(3)     <---------AHL20(2)                    --------->ANAC58          --------->YAB1         ----------->GT1                    --------->ANAC46   --------->GLK1(2)           <---------WOX13(1)  <---------AHL20(2)             <---------------AtSPL8    --------->ARR14(2)        --------->ATHB12 <------ZmHOX2a(1)        <----------DOF2>>>>>>>>>>GT-3b <---------ARR14(2)     --------->YAB1--------->ATHB12   tgacatatttcttttttggtacaagaaaaataaataaagagaatccaataagaagataacccaatagtaattggtaattcattaggaattttttttctaa  11761300                                                                                                    -                                                                                                   --                                                                                                   --                                                       --------->AHL20(2)                          --                         <---------AHL20(2)        <---------AHL20(2)                              --                         --------->AHL20(2)        --------->AHL20(2)                         -------                        --------->AHL20(2)    <------ZmHOX2a(2)   <----------DOF2             <------         <---------AHL20(2)  <---------AHL20(2)   --------->AHL20(2)                          -------  --------->DAG2  --------->GLK1(2)       <---------ATHB12        <---------DAG2              <------ ---------->DOF2 <---------GLK1(2)   <-----------GT1 <---------TOE2(3)       <XXXXXXXXXXXXXXXXXXXXMIR1887   caaaaaagtttttaatctagaatctatttattttttttttttcaatcgatcatttaatgaaataaaaactttttttttttttggatgtttacttagtaca  11761400      ----------->GT1  --------->SPL7 <---------MYB52(1)                                                                                 - -------->LBD16                                                                                   <-- ------->ANAC58                                                                                   --- ------->ANAC58                            ----------->GT1        --------->AHL20(2)      <---------- ------->ANAC55(1)              <---------YAB1                 --------->CCA1(2)          ----------- ------->ANAC46               <-----------GT1                 <---------ARR11(3)         ------------ -->ZAT18        <---------ETT(2)     <---------YAB1 ================================================ ---ZAT18        >>>>>>>>>>AtTINY2   <---------AHL20(2)  --------->YAB1                  ------------ -->ZAT14        --------->ETT(2)    <---------AHL20(1) <---------YAB1        <----------DOF2 ------- ---ZAT14      --------->MYB52(1)  <---------YAB1    --------------->AGL15    <---------DAG2 --------   cccgtaagtcgttaaactatcgacatcgagttttactattatttttggttataaacttattatagatataaaataatgtgctttatcaattgcctaaaag  11761500   <---------AHL20(2)   --------->AHL20(2)                                                          --------->AHL20(2) ---------->GT1                                                       <------MYB46(1) -------ZAT14                                                         <------MYB83 ------>ZAT14                                                       <---------ANAC46 -----AGL15                                                         <---------ANAC58 ---->AGL15                                                         <---------ANAC58 ----->AGL1                 <----------DOF2                   <---------ARR14(2) =====MADS_MADS          <-----------GT1                 <-----------GT1      --------->AHL20(2) ----->AG          <---------YAB1          <---------At4g35610--------->ARR14(2)          ------->TEIL -->DAG2       --------->ARR11(3)    <----------DOF2     --------->MYB52(1)   <---------AHL20(2)   -- -->DOF2     <---------YAB1 <---------DAG2 --------->At4g35610------->TEIL  <----------DOF2    ------   tgtagttaaatatgtatgattttgattttactttatgccctttacagctcaactatatataacgaatttggctggtttctttaaattacatgtatgttaa  11761600  Previous    Next  AGI:  At2g27500.1    Description:  glycosyl hydrolase family 17 protein. Identical to Putative glucan endo-1,3-beta-glucosidase 14 precursor (At2g27500/F10A12.18) [Arabidopsis Thaliana] (GB:Q9ZQG9;GB:Q2V449;GB:Q3EBS8;GB:Q8VWJ3); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT1G32860.1); similar to unknown [Populus trichocarpa] (GB:ABK94377.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 11759248    to: 11761106    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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