Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <-----------RAV1(1)                                   ------>ZmHOX2a(2)                                  <------ZmHOX2a(2)                                                 -                                 --------->AGP1                                                     -                                 --------->ARR11(3)                                                 -                                 <---------ARR11(3)                                                --                                 --------->ARR14(2)               ----------->RAV1(1)              --       ----------->GT1           <---------ARR14(2)              XXXXXXXXXXXXXXXXXXXX>MIR415       --       --------->YAB1            <---------AGP1                  <----------ID1                  ----  <---------YAB1 <<<<<<<<<<<<<<<<<LFY  <---------MYB46(3)--------->GLK1(2)                       ---- -------------->AGL15      ----------->HVH21 ------->TEIL--------->ARR11(3)                    <----- ---->MYB46(3)  --------->ANAC46<---------CCA1(2)        <---------ARR11(3)              <-----------GT1   cactatgaatagtaatatactccaatggactcacagatctgttgttgaatcttcacaaaaatctaaaacaacaaaaacaaaacattgtttttttcagtac  11415000      <-----------RAV1(1) ------>NtERF2 -------->ANAC58 -------->ANAC58 -------->ANAC46 ------->SPL7 ---->MYB83 ---->MYB46(1)                                                                                     -- ----->TOE1(2)                        <---------AHL20(2)                     ------->TEIL          -- ----->TOE2(2)  --------->YAB1 ------->GAMYB    <---------AHL20(2)        <---------WOX13(1)     <--- ------ARR10    <<<<<<<<<<<<<<<<<LFY  --------->AHL20(2)        ---------->DOF2                  <---   ctacgccaatgttggaaataacaatggattcaacacacatttaaaaacattttatagctacagagataaagaattgatggatgtcaaaaccctagattac  11415100                     -------->P                    ------->GAMYB                   <---------MYB46(2)                   <---------MYB111(1)                   <---------MYB55(2)        --------->At4g35610   ---------->DOF2 --------->MYB46(3) ---->MYB46(1)     <---------MYB52(2)                                                               - ---->MYB83--------->MYB52(1) ----------------->AGL1                                         -------- ------MYB46(2)    <---------MYB111(2)            ---------->DOF2  ---------->DOF2 --------->ARR11(3) ------MYB59    --------->MYB46(3)   ----------->GT1      --------->CCA1(2)        <---------ARR11(3)   caaacaaaagagctaacaacaactacccatataccaatttagtaacaaatttcaaagaagatagaaattgaaagtcaaattttaagaacttgaaatcgaa  11415200                                         <---------GLK1(2)                                         --------->ARR11(3)                                         <---------ARR11(3)                          --------->ANAC58                          --------->ANAC58                        --------->YAB1   <---------ARR14(2)                   <---------ARR14(2)                     <---------ICU4      --------->ARR14(2)                   --------->ARR14(2)                     --------->YAB1   <------NtERF2                      --------->At4g35610 -------->YAB1      --------->ICU4<-----------HVH21<----------ID1        ----------->RAV1(2) --->GT1            <---------ATHB12<---------DEAR3(1) ---------->DOF2   <---------At4g35610<------ZmHOX2a(2)   aatcagaacacaaaatactgcaataatcacgaacaacgtcggagattttcaagagaacaaagctaaacacttctcacctgaatccgattaatggatcaga  11415300                                                                  <------MYB83                                                                 --------->MYB59                                                               --------->ARR14(1)                                                               --------->CCA1(2)                                                              <---------ARR11(3)                                                              --------->ARR11(1)                                        <---------ZAT14       --------->ARR11(3)                                    <---------HSFB2a(2)       --------->ARR14(2)                                    --------->HSFB2a(2)       <---------ARR14(2)     --------->DAG2                                <---------DEAR3(1)      >>>>>>>>>TBF1     <------ZmHOX2a(1)                               <---------------------WRI1   ----------->ARR10  ----------->GT1                <------ZmHOX2a(2) <------NtERF2      >>>>>>>>>TBF1<------MYB46(1)   ---------->DOF2   caaatgttttgagttgagatcgaatttgagaaggtcgtcgagaacagagaaggaagaagaagaagatttggtctgaggagaaggcaaaaagtgaagtttg  11415400                                                       <---------AtMYB61                                                     <----------DOF2                                                    <---------ANAC46                                     --------->At5g28300<---------ANAC46            ---------->ID1                              ---------->DOF2       <---------ANAC58          <----------DOF2                 <----------DOF2    ----------->GT1 <---------ANAC58        ---------->ID1     <-----          <---------ICU4   --------->ANAC58      <---------RAP2.6(2)       <-----------GT1     ------         --------->ICU4    --------->ANAC58    <-----------RAV1(1)     <----------DOF2<----------DOF2        --------->ANAC58  --------->DAG2     <------------CBF          <------------------------ANAC81    *TSS--------->ANAC58 ---------->DOF2   <---------AHL20(2)     <<<<<<<<<TAC1    <-----------GT1   agagagtcgtaagcattagctttactaaaaagcaaagaccgtgaaaaaattgtggctttggtggaaacactgtcttttttctttttttctttttttttta  11415500                                       <-----------RAV1(1)                                   <---------AHL20(2)                                   --------->AHL20(2)                                   <---------AHL20(1)                 --------->ALFIN1                                   --------->AHL20(1)                 <-----------RAV1(1)                             ----------->GT1                        <---------ANAC58                             --------->ANAC55(2)                    --------->ALFIN1                            <---------TOE2(3)                       <---------ANAC58   <---------MYB46(3)                            --------->MYB59                    <---------MYB46(3)    <-------GAMYB                            <---------TOE1(3)                 <--------P        <---------SPL7                      --------------->AGL15                  <-------GAMYB   <-----------HVH21                      <---------------AGL15                  <---------MYB52(1)--------->ETT(1)                     <-----------------AGL1                 --------->LBD16 <-----------RAV1(1) ----AHL20(2)        <-----------------AG                 <---------LBD16 <---------At4g35610 --->AHL20(2)        <-----------------AGL2        <-----------GT1<---------ANAC46  <-----------RAV1(1)   atttagttttgtttaaaagtttttctggtttaggtaataaattgttgcataattttcaactccggttgatgtgtgtcgctgtcggactgttgttgtctga  11415600                                 <---------ANAC55(1)                                 <---------ANAC46                                 <---------ANAC58                                 --------->ANAC55(2)                                 <---------ANAC58                                 <---------ANAC55(2)                         --------->ARR14(2)                     --------->ANAC55(2)                    <---------YAB1                     <-----                     <---------ANAC55(2)             --------->GLK1(2)                       --------                     <---------ANAC46             <---------ARR11(3)                         <-------                  --------->WRKY18(1)             --------->ARR11(3)                   --------->YAB1                  ----------->HVH21             --------->ANAC58                 --------->ANAC58                 <-----------HVH21         ------->GAMYB    <---------AHL20(2)   --------->ANAC58 ---              --------->ZAT14 <---------MYB52(1)--------->ANAC58               ---------->DOF2 ------     <---------ICU4 <---------LBD16     <-----------GT1 <----------DOF2  ---------->DOF2    ---------   aacttaaaaatcacagagcggtcacgggttctgtttcgtgtttaactgccacgatattctttttaattgttttttaaaagggaaagtaatcaaaatgatg  11415700                  <---------ANAC46                <------MYB46(1)                <------MYB83                <---------ANAC58                <---------ANAC46                      --------->ANAC58     --------->YAB1                                   --------->ANAC58  --------->YAB1<---------ANAC58                    ---------->DOF2     --------->WRKY18(1) ----bZIP60(1) <---------MYB46(3)         <---------------AGL15--------------->AGL15                < ->YAB1        --------->MYB46(2)        <-----------------AG  <----------DOF2                  <---- --ICU4        --------->MYB111(1)       ======================================MADS_MADS        <---- ------>ZAT6 <---------ANAC46 <---------ARR11(3) <------MYB83  <---------------AGL15   <---------AHL20(2) --->bZIP60(1) <---------AtMYB61 <----------DOF2 <------MYB46(1)       <-----------HVH21     <------- >ICU4     <---------MYB46(3) --------->ARR11(3)--------->MYB59<---------DAG2      <---------AHL20(2)   acactaataagagtggtttggtgtgaaacttagacctttcttacacaaatttggtaaagccaaaactttttttggtcatggggatttatttttttttact  11415800                                                        <---------AHL20(1)                                                        --------->AHL20(2)              --------->LBD16                                                        <---------AHL20(2)             <---------ANAC46                                                        --------->AHL20(1)            <---------LBD16                                                --------->ANAC58                     xxxxxxxxxxxxxxxx                                                ----------->GT1               --------->TOE2(3)                                                <---------ANAC55(2)          ----------->GT1                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  xxxxxxxxxxxxxxxxxx    <---------AHL20(2)                     ---------->DOF2    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ---------AHL20(2)              --------->ARR11(3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) -----DAG2        ---------->DOF2          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   <xxxxxxxxxxxxxxxxx ------DOF2      --------->ICU4 --------->GLK1(2)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<------NtERF2 ----GT1       --------->YAB1  <---------GLK1(2)--------->ANAC58             <---------ANAC55(2)   ttttatttttttttttgtcataaagaaattatagaatcttgttgtgaaagacgtaaaatataatgcccaaacaaaaaaaacgtaaattggcggataaact  11415900  Previous    Next  AGI:  At2g26770.1    Description:  plectin-related. similar to 3'-5'-exoribonuclease/ RNA binding [Arabidopsis thaliana] (TAIR:AT2G40820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18229.1) Range:  from: 11411144    to: 11415404    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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