Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <--------ATHB1    ------->MYC3                           <---------ICU4    <-------MYC2                           <------------ATHB5    <-------MYC3                           --------->YAB1    ------->MYC2           --------------->AtSPL8 <---------At4g35610   --------->ANAC58        <---------ICU4 --------->ICU4   --------->ANAC58        <---------------AtSPL8 --------->At4g35610 -----ZmHOX2a(1)   --------->AHL20(2)     <---------ATHB51   --------->YAB1              xxxxxxxxxxxx -PCF2   <----------DOF2  --------->ICU4--------->YAB1      <---------YAB1         --------->MYB46(3)   aggacacgttcctttgatcaaataactaataagtacaacttacaataatggaagctcatgttataatcaacttactcgagattgaacaactctctctctt  8927100                                                  <---------TOE1(3)                <---------MYB52(1)             --------->WRKY18(1)               <-------GAMYB            --------->AHL20(2)        ------->GAMYB        --------->ANAC46                <---------AHL20(2)       <---------MYB111(2)        --------->ANAC58                <---------AHL20(1)       --------->MYB46(3)                <-        --------->ANAC58               --------->AHL20(2)        <---------MYB52(2)    <---------AHL20(2)     <---------ZAT18           <---------ARR11(3) <---------TOE2(3)                    --------->AHL20(2)     --------->ZAT18     <-----------GT1--------->AHL20(1)       <---------MYB55(2)    --------->AHL20(1) xxxxxxx>smallRNA(i2) ----------->GT1  <---------ATHB12        ----------->RAV1(1)     <---------AHL20(1)   atatgtttgcactctaccgttgtattgtaacatgaccttcaataaattagtcaaggtttcaaatccaacaaacatgtagaacatgacattttattgtgaa  8927200                                                                      --------->AHL20(2)         <---------DAG2                                    <---------AHL20(2)         <----------DOF2                       <---------AHL20(2)     <---------AHL20(2)      ------>MYB46(1)                          <---------AHL20(1)    --------->AHL20(2)      ------>MYB83                             --------->AHL20(1) <---------YAB1    <---------MYB59                           --------->YAB1     --------->AHL20(2)   --------->ANAC58                           --------->AHL20(2) <---------AHL20(2)      <-----------GT1   --------->ANAC58                          <---------YAB1--------->AHL20(2)--------------->AtSPL8  ------->TEIL                            <---------AHL20(2)    --------->AHL20(2)    --------->ANAC55(2) ------>MYB46(1)                          --------->AHL20(2)<---------AHL20(2)        --------->YAB1 ------>MYB83           -------->P        --------->AHL20(1)--------->AHL20(1)        --------->ANAC46 --------MYB59     <-----------GT1        <---------AHL20(1)--------->AHL20(2)       <-------TEIL----   accgaacccaacttttttttttcacttaccctagttcgtcaaaatttattatattttggaattaaattaaaattaattctttgtacatacataaccatac  8927300                                                                   <---------At5g28300                                                                  <-----------GT1                            --------->ANAC58                  <---------DAG2                            --------->ANAC58                  <----------DOF2                            --------->ANAC46               <---------AHL20(2)                      <-                         --------->TOE1(2)                 <-----------GT1--------->ZAT14         <-- ----->TOE2(3)    --------->AHL20(2)                  <---------YAB1      <---------ZAT14    <-------   attagttattttgttttggaataaataactacgaaaaaatgtttttgacaacaagtattatttacttttcactgtcttcactcttctcttctgtagtatt  8927400                                                           <---------ANAC46                                                           <--------P                                                        <-----------RAV1(1)                                                       ------>ZmHOX2a(2)                                                      --------->CCA1(2)                                                      <------ZmHOX2a(2)                                                     <---------AGP1 -------->HAHB4                                                     --------->AGP1<---------YAB1                                                     <---------ARR14(2)                                                     --------->ARR14(2)                                                     <-----------ARR10                                                     --------->ARR14(3)                                                     <---------ARR14(3)                                                     --------->ARR11(3)                                                     <---------ARR11(3)                                                    <---------CCA1(2)                                                   ----------->ARR10--------->YAB1                                             --------->ALFIN1 <-------GAMYB------>MYB46(1)      --------->ATHB12                       <-----------RAV1(1)  <---------TOE2(3)                --    <---------TOE2(3)                        <---------ANAC46----------->GT1         --------->At5g28300 <---------YAB1                              <---------ANAC58<------MYB46(1)         --------->LBD16 --------ZAT6          ------>MYB46(1)       <---------ANAC58<------MYB83  ------>MYB83 ---------->DOF2 -------YAB1           ------>MYB83       <---------MYB52(1)<---------MYB46(3)      --------->TOE2(3) --ZAT6       --------->AHL20(2)         <---------ANAC46 <---------MYB52(1)--------->HSFB2a(1)   ---   agtattatggattggattaaataccaaatgagaaatttaagtcccttgtgtggcagatctggtgggttaatgataccaacgttctaccgtaaaagcccat  8927500                                                        --------->REM1(2)                                                     <---------ANAC58                              ------->GAMYB          <---------ANAC46                      ----------->RAV1(1)            <---------ANAC58  <---------ANAC58                     --------->ANAC46           *TSS<-------TEIL<---------GLK1(2)                   ------->GAMYB         <---------ALFIN1 --------->ARR14(2)             --------->ANAC55(2)         --------->ANAC58 ------->TEIL <---------ANAC58      <---------TOE2(3)     --------->ZAT14    ---------->DOF2<---------YAB1     --------->MYB52(1)   --------->ANAC46 --------->ANAC46   ------>ZmHOX2a(1)      <<<<<<<<<TBF1 ------->LBD16     --------->TOE2(3)     --------->ANAC46 <---------ARR14(2)    <----------DOF2    <- ------>ANAC46    --------->MYB46(3)     --------->ANAC58<---------CCA1(2)     <---------DAG2     <--   ccgaaattaacgcatacttaaccacaacacaacacacacacacacacatcaaagtgcgtgtatcctgattcttacttgctacctttcttcttccttcttc  8927600                                                                                                 ----                                                                                                 ----                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               ------          --------->YAB1--------->YAB1                                                         <-----      <---------ICU4<---------ICU4  <---------ARR11(3)                                    --------->ATHB12     <---------YAB1<---------YAB1   --------->ARR11(3)           --------->ARR11(3)       --------->YAB1   --------->YAB1--------->YAB1    <---------CCA1(2)      <------ZmHOX2a(2)             <---------WOX13(1) --------ICU4<---------ICU4<---------ICU4            <---------LBD16        ----------->GT1 <-------- -------YAB1<---------YAB1<---------YAB1      <----------DOF2    <---------ARR11(3)  <---------YAB1--   atcattcatcattcatcattcatcattcatcattctcatatctctcttcttttactggggatcacaatatctatctagttgtaaattgtgaatgatagat  8927700               --------->DEAR3(1)            <---------ATERF1(2)                                                <---------ANAC46            --------->ANAC46                                                   <---------ANAC55(1) ------->RAV1(2)                                                               <---------YAB1 -->ZmHOX2a(2) <---------ALFIN1                                             <---------MYB52(1) --ZmHOX2a(2) <------NtERF2                                              ------>ZmHOX2a(2) --->ARR14(2) --------->ATERF1(1)                                       <------ZmHOX2a(2) ----ARR11(3)<---------ATERF1(1)                                       <---------ARR14(2) ----GLK1(2)--------->RAP2.6(2)                                        --------->ARR11(3) --->AGP1   --------->ATERF1(2)                                        --------->ARR14(2) --->ARR11(3)------>NtERF2                           ---------->DOF2   <---------ARR11(3) ----ARR14(2)<---------RAP2.6(3)                    --------->ANAC46   --------->AGP1               < -WOX13(1)  --------->DEAR3(1)          <-----------GT1               --------->GLK1(1)         <---- ---->ZmHOX2a(1)------>NtERF2     ------->TEIL    <---------ALFIN1    <---------GLK1(1)  --------->YAB1   cctgagccttcttgccgccacctcttgaacttaatgtacttgaaaccagtctccacatagcgatagagagagagatctgttatgtgtgtattcatcaagt  8927800                                                                     --------->GLK1(2)                                                                     <---------ARR14(2)                                                               --------->YAB1                                                              <---------YAB1                       <-                                                            --------->YAB1           --------->ARR11(3) <----------DOF2  ----------->GT1                <----------DOF2     --------->ARR11(3) <-----------GT1 -----------------AGL3---------->DOF2         --------->ARR11(3)  <---------AHL20(2) <---------ARR11(3) -----ARR11(3)---------->DOF2                 <---------ARR11(3)  --------->AHL20(2) <---------GLK1(2)   tctctttttttgggctcaaagtgtaaaaggagacattttcaattctgagttcttttgttttcttataataaaatctgggttttctgagattttcttcaca  8927900                                                                                                  ===                                                                                                  ---                                                                                                  <--                                 <-----------HVH21                                               <---                              <---------ANAC58                                                   <---        ------->MYC3          <---------ANAC46                                             <---------YAB1        <-------MYC3          <---------ANAC58               <---------YAB1              <---------ICU4       <---------O2      <----------DOF2                   <----------DOF2            <---------AHL20(2)       <---------ANAC46 ------>ZmHOX2a(2)        <---------TOE2(3)                   --------->AHL20(2) --------->SPL7       --------->ARR11(3)       ---------->DOF2                    <------ZmHOX2a(1) --------SPL7         <---------ARR11(3)      <---------ATHB12                ---------->DOF2  <-----   tcgtccgaaacgtggacacattttgatcttttgggtgtcactgtgtcaataaaggttgaaactttgattacatttctctcaaaaggattaatttttattt  8928000  Previous    Next  AGI:  At2g20680.1    Description:  glycosyl hydrolase family 5 protein / cellulase family protein. Identical to Mannan endo-1,4-beta-mannosidase 2 precursor (MAN2) [Arabidopsis Thaliana] (GB:Q7Y223;GB:Q9SKU9); similar to glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] (TAIR:AT4G28320.1); similar to unknown [Populus trichocarpa] (GB:ABK95966.1); contains InterPro domain Glycoside hydrolase, family 5; (InterPro:IPR001547); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 8927548    to: 8930254    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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