Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------->YAB1    <-------MYC3                           <--------ATHB1    ------->MYC2                           <------------ATHB5    ------->MYC3                           <---------ICU4    <-------MYC2           <---------------AtSPL8 <---------At4g35610   --------->ANAC58        <---------ICU4 --------->ICU4   --------->ANAC58        --------------->AtSPL8 --------->At4g35610 -----ZmHOX2a(1)   --------->AHL20(2)     <---------ATHB51   --------->YAB1              xxxxxxxxxxxx -PCF2   <----------DOF2  --------->ICU4--------->YAB1      <---------YAB1         --------->MYB46(3)   aggacacgttcctttgatcaaataactaataagtacaacttacaataatggaagctcatgttataatcaacttactcgagattgaacaactctctctctt  8927100                                                  <---------TOE1(3)                <---------MYB52(1)             --------->WRKY18(1)               <-------GAMYB            --------->AHL20(1)        ------->GAMYB        --------->ANAC46                <---------AHL20(1)       --------->MYB46(3)        --------->ANAC58                <---------AHL20(2)       <---------MYB52(2)                <-        --------->ANAC58               <---------ATHB12          <---------MYB111(2)   <---------AHL20(2)     <---------ZAT18           <---------ARR11(3) <---------TOE2(3)                    --------->AHL20(2)     --------->ZAT18     <-----------GT1--------->AHL20(2)       <---------MYB55(2)    <---------AHL20(1) xxxxxxx>smallRNA(i2) ----------->GT1  --------->AHL20(2)      ----------->RAV1(1)     --------->AHL20(1)   atatgtttgcactctaccgttgtattgtaacatgaccttcaataaattagtcaaggtttcaaatccaacaaacatgtagaacatgacattttattgtgaa  8927200                                                                      --------->AHL20(2)         <----------DOF2                                   <---------AHL20(2)         <---------DAG2                        <---------AHL20(1)     <---------AHL20(2)      ------>MYB83                             --------->AHL20(1)    --------->AHL20(2)      ------>MYB46(1)                          <---------AHL20(2) <---------YAB1    <---------MYB59                           --------->AHL20(2) --------->AHL20(2)   --------->ANAC58                           --------->YAB1     <---------AHL20(2)      <-----------GT1   --------->ANAC58                          <---------YAB1--------->AHL20(2)--------------->AtSPL8  ------->TEIL                            <---------AHL20(2)    --------->AHL20(2)    --------->YAB1 ------>MYB46(1)                          --------->AHL20(2)--------->AHL20(2)        --------->ANAC55(2) ------>MYB83           -------->P        <---------AHL20(1)<---------AHL20(2)        --------->ANAC46 --------MYB59     <-----------GT1        --------->AHL20(1)--------->AHL20(1)       <-------TEIL----   accgaacccaacttttttttttcacttaccctagttcgtcaaaatttattatattttggaattaaattaaaattaattctttgtacatacataaccatac  8927300                                                                   <---------At5g28300                                                                  <-----------GT1                            --------->ANAC46                  <---------DAG2                            --------->ANAC58                  <----------DOF2                            --------->ANAC58               <---------AHL20(2)                      <-                         --------->TOE1(2)                 <-----------GT1<---------ZAT14         <-- ----->TOE2(3)    --------->AHL20(2)                  <---------YAB1      --------->ZAT14    <-------   attagttattttgttttggaataaataactacgaaaaaatgtttttgacaacaagtattatttacttttcactgtcttcactcttctcttctgtagtatt  8927400                                                           <---------ANAC46                                                           <--------P                                                        <-----------RAV1(1)                                                       ------>ZmHOX2a(2)                                                      --------->CCA1(2)                                                      <------ZmHOX2a(2)                                                     <---------AGP1 -------->HAHB4                                                     --------->AGP1<---------YAB1                                                     <---------ARR14(2)                                                     --------->ARR14(2)                                                     <-----------ARR10                                                     --------->ARR14(3)                                                     <---------ARR14(3)                                                     --------->ARR11(3)                                                     <---------ARR11(3)                                                    <---------CCA1(2)                                                   ----------->ARR10--------->YAB1                                             <---------ANAC58 <-------GAMYB------>MYB46(1)      --------->ATHB12                       <---------ANAC46----------->GT1                       --    <---------TOE2(3)                        --------->ALFIN1<------MYB46(1)         --------->At5g28300 <---------YAB1                              <-----------RAV1(1)  <---------TOE2(3)  --------->LBD16 --------ZAT6          ------>MYB83          <---------ANAC58<------MYB83  ------>MYB83 ---------->DOF2 -------YAB1           ------>MYB46(1)    <---------MYB52(1)<---------MYB46(3)      --------->TOE2(3) --ZAT6       --------->AHL20(2)         <---------ANAC46 <---------MYB52(1)--------->HSFB2a(1)   ---   agtattatggattggattaaataccaaatgagaaatttaagtcccttgtgtggcagatctggtgggttaatgataccaacgttctaccgtaaaagcccat  8927500                                                        --------->REM1(2)                                                     <---------ANAC58                              ------->GAMYB          <---------ANAC46                      ----------->RAV1(1)            <---------ANAC58  <---------ANAC58                     --------->ANAC46           *TSS<-------TEIL<---------GLK1(2)                   ------->GAMYB         --------->ANAC46 ------->TEIL <---------ANAC58             --------->ANAC55(2)         --------->ANAC58 <---------ARR14(2)      <---------TOE2(3)     --------->ZAT14    ---------->DOF2<---------YAB1     --------->MYB52(1)   --------->ANAC46 --------->ANAC46   ------>ZmHOX2a(1)      <<<<<<<<<TBF1 ------->LBD16     --------->TOE2(3)     --------->ANAC58 --------->ARR14(2)    <----------DOF2    <- ------>ANAC46    --------->MYB46(3)     <---------ALFIN1<---------CCA1(2)     <---------DAG2     <--   ccgaaattaacgcatacttaaccacaacacaacacacacacacacacatcaaagtgcgtgtatcctgattcttacttgctacctttcttcttccttcttc  8927600                                                                                                 ----                                                                                                 ----                                                                                                <----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               <-----          --------->YAB1--------->YAB1                                                         <-----      <---------ICU4<---------ICU4  <---------ARR11(3)                                    --------->YAB1     <---------YAB1<---------YAB1   --------->ARR11(3)           <---------ARR11(3)       --------->ATHB12   --------->YAB1--------->YAB1    <---------CCA1(2)      <------ZmHOX2a(2)             <---------WOX13(1) --------ICU4<---------ICU4<---------ICU4            <---------LBD16        ----------->GT1 <-------- -------YAB1<---------YAB1<---------YAB1      <----------DOF2    --------->ARR11(3)  <---------YAB1--   atcattcatcattcatcattcatcattcatcattctcatatctctcttcttttactggggatcacaatatctatctagttgtaaattgtgaatgatagat  8927700               <---------ALFIN1            <---------ATERF1(2)                                                <---------ANAC46            --------->DEAR3(1)                                                 <---------ANAC55(1) -->ZmHOX2a(2) --------->DEAR3(1)                                              <---------YAB1 ------->RAV1(2)                                                            <---------MYB52(1) --ZmHOX2a(2) --------->ATERF1(1)                                        ------>ZmHOX2a(2) --->ARR14(2) <------NtERF2                                             <------ZmHOX2a(2) --->AGP1   --------->RAP2.6(2)                                        <---------ARR11(3) --->ARR11(3)<---------RAP2.6(3)                                       --------->ARR11(3) ----GLK1(2)--------->ANAC46                                           --------->ARR14(2) ----ARR11(3)------>NtERF2                           ---------->DOF2   --------->AGP1 ----ARR14(2)<---------ATERF1(1)                    --------->ANAC46   <---------ARR14(2)           < -WOX13(1)  --------->ATERF1(2)         <-----------GT1               --------->GLK1(1)         <---- ---->ZmHOX2a(1)------>NtERF2     ------->TEIL    <---------ALFIN1    <---------GLK1(1)  --------->YAB1   cctgagccttcttgccgccacctcttgaacttaatgtacttgaaaccagtctccacatagcgatagagagagagatctgttatgtgtgtattcatcaagt  8927800                                                                     --------->ARR11(3)                                                                     --------->GLK1(2)                                                               --------->YAB1                                                              <---------YAB1                       <-                                                            --------->YAB1           --------->ARR11(3) <----------DOF2  ----------->GT1                <----------DOF2     <---------ARR14(2) <-----------GT1 -----------------AGL3---------->DOF2         <---------ARR11(3)  --------->AHL20(2) <---------ARR11(3) -----ARR11(3)---------->DOF2                 --------->ARR11(3)  <---------AHL20(2) <---------GLK1(2)   tctctttttttgggctcaaagtgtaaaaggagacattttcaattctgagttcttttgttttcttataataaaatctgggttttctgagattttcttcaca  8927900                                                                                                  ---                                                                                                  <--                                                                                                  ===                                 <-----------HVH21                                               <---                              <---------ANAC58                                                   <---        <-------MYC3          <---------ANAC46                                             <---------YAB1        ------->MYC3          <---------ANAC58               <---------YAB1              <---------ICU4       <---------ANAC46  <----------DOF2                   <----------DOF2            <---------AHL20(2)       <---------O2     ------>ZmHOX2a(2)        <---------TOE2(3)                   --------->AHL20(2) --------->SPL7       --------->ARR11(3)       ---------->DOF2                    <------ZmHOX2a(1) --------SPL7         <---------ARR11(3)      <---------ATHB12                ---------->DOF2  <-----   tcgtccgaaacgtggacacattttgatcttttgggtgtcactgtgtcaataaaggttgaaactttgattacatttctctcaaaaggattaatttttattt  8928000  Previous    Next  AGI:  At2g20680.1    Description:  glycosyl hydrolase family 5 protein / cellulase family protein. Identical to Mannan endo-1,4-beta-mannosidase 2 precursor (MAN2) [Arabidopsis Thaliana] (GB:Q7Y223;GB:Q9SKU9); similar to glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] (TAIR:AT4G28320.1); similar to unknown [Populus trichocarpa] (GB:ABK95966.1); contains InterPro domain Glycoside hydrolase, family 5; (InterPro:IPR001547); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 8927548    to: 8930254    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.