Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->ZAT6                  --------->YAB1                   ------>ZmHOX2a(2)                 <------ZmHOX2a(2)               <---------ARR11(3)                <---------ARR11(3)      --------->HSFB2a(2)                                         -          --------->YAB1     ----------->RAV1(1) --------->ARR11(3)                              ----          <---------ICU4 --------->ANAC58   --------->DAG2                <---------WOX13(1)   ------         <---------ATHB12--------->ANAC58  ---------->DOF2              <---------ICU4         <-----      <---------AHL20(2) --------->ANAC46--------->LBD16      --------->bZIP60(2)              <----- ------>GLK1(2) --------->ARR11(3)      <---------HSFB2a(2) <---------ALFIN1            ----------->HVH21   aatcttgtttaatcatcagatcataacactccaacaaaacatccagaaagtgatctatacagccacttcatcagtaattgctaaatctaagtgacactgc  6625700                                <---------TOE1(2)                                <---------TOE2(2)                               --------->LBD16          <---------MYB52(1)                              <---------TOE1(1)        --------->At5g28300 ----->NtERF2                 <---------TOE2(1)    <---------ALFIN1 ----->LBD16               --------->ARR14(2)      --------->AtMYB61 --->ZAT14                 <---------ARR14(2)     --------->MYB46(3) ----LBD16            <---------At4g35610         <---------MYB55(2)                              <-- ----ZAT14            --------->At4g35610     ------>ZmHOX2a(1)                 --------->GLK1(2) ---   ggagccaaaatatcaaatcgattcagctaaatccgaggttttctcatcctctaccaccgtaattcgatctaagagaatgaagaatctatctaaaaatcga  6625800                  --------->ANAC46                           <----------ID1              <<<<<<<<<GATA-4                               --------->SPL7              <<<<<<<<<GATA-1                              --------->CCA1(2)              <<<<<<<<<GATA-3                          <---------TOE2(3)            --------->WOX13(1)                         <---------TOE1(3)          <------ZmHOX2a(2)                           --------->MYB52(1)         --------->ARR11(3)                        --------->TOE1(3) <---------CCA1(2)--------->ANAC58                 --------->TOE2(3)                          <------ -------MYB59 <<<<<<<<<GATA-2  <---------ARR11(3)--------->GLK1(2)---------->DOF2 --------->TOE1(2) ------>TOE2(3)   --------->ANAC58    <---------YAB1  <---------DOF5.7(2)        <---------HSFB2a(1)   cctaaatctgagatcaatccacgataagctcgagatgtttatgagtaagagaaccttaacgatacgacgaaagtactgaaggaacattggattagctcgg  6625900                               <---------ANAC46                             --------->ALFIN1                      --------->HSFB2a(2)                      <---------HSFB2a(2)                     ------>ZmHOX2a(2)                     ==================================HOX2a_HOX2a                    --------->CCA1(2)                    <------ZmHOX2a(2)                    ===================================HOX2a_HOX2a                   --------->AGP1                   <---------ARR14(3)                                         <<<<<<<<<TBF1                   --------->ARR11(3)                              --------->ARR11(3)                   --------->ARR14(2)               <---------MYB52(1) <---------YAB1                   <---------ARR14(2)           ------>ZmHOX2a(1)  <---------ARR14(2)               -                   <---------AGP1               ======================HOX2a_HOX2a            <<<<<<<<                   <---------ARR11(3)  <---------ARR11(3)          <---------ARR11(3)     <<<<<<<<<TBF1                   --------->ARR14(3)  --------->ARR11(3)          --------->ARR14(2)  <<<<<<<<<TBF1-                  <---------GLK1(1)   --------->REM1(1)            <---------GLK1(2)<<<<<<<<<TBF1   < ---LBD16        ----------->ARR10  ----------->RAV1(1)        ------>ZmHOX2a(2) <<<<<<<<<TBF1      <   gatgaagaagatgaagaacgagatctggaagttgtgggcaacatcttctcctcccttgtttctgatccagattttgattcttcttcttcttcttcttctt  6626000                    ------>ZmHOX2a(2)                                       <---------MYB46(3)  ------>ZmHOX2a(2)<------ZmHOX2a(2)                                        <---------HSFB2a(1) <------ZmHOX2a(2) <---------GLK1(1)                                       <---------KAN4(2) -------->ARR11(3) --------->GLK1(1)              <----------DOF2         <------------CBF----------- <TBF1 <---------YAB1            --------->ARR14(2)                <----------DOF2        --------->LBD16 -------->ARR14(2)<---------AGP1 <---------ARR14(2)     *TSS   <---------ANAC46<---------ZAT18 ---------ARR14(2)<---------ARR11(3)           ---------->ID1 <---------LBD16--------->KAN4(2) ---------ARR11(3)--------->ARR11(3)          <-----------GT1<-----------GT1--------->KAN4(1)   cagatcgttttgattcgaaagatctctctggttcgaattctctgcgtttttccttttggttattttcgggtttagggattgttcgcttataccgcaatcg  6626100                                    ----------->GT1                                    <------MYB83                                    <------MYB46(1)                                   <---------MYB46(3)                                   --------->MYB59                                   --------->MYB46(2)                                   --------->MYB52(2)                                   --------------->AtSPL3                                  --------->SPL7                                  <---------MYB55(1)                                <---------SPL7                               <---------ANAC58                               <---------ANAC58                        <---------RAP2.6(2)                        <---------ANAC58                    <-------GAMYB<---------MYB52(1)                                                 -                    --------->At4g35610                  <---------MYB52(1)                        --                    <---------At4g35610          --------->ANAC46                       <---------MYB52(1)           <----------DOF2  <---------DEAR3(1) <---------YAB1                        --------------->AtSPL8      --------->HSFC1(2)<---------ANAC46       <-----------GT1   ---------->ID1<---------ANAC46   --- ->CBF<---------HSFC1(2)<---------ANAC58     --------->YAB1  <----------DOF2  ---------->ID1<--------   cacccagacgcttcttttttgcagttgcggtctgcgttcggtacaaattatactaaaccgttcctttgttttttttttttgtcgtaaaccgttcctttta  6626200                            <---------ALFIN1                          --------->AtMYB61                            <---------HSFC1(1)                          ------->GAMYB                                --------->HSFC1(1)     -------                         --------->MYB46(3)                            <---------HSFB2a(2)    -------                    --------->ANAC58                          --------->ANAC55(2)             <------ ---------->GT1     --------->ANAC46                 --------->MYB46(3)--------->HSFB2a(2)   <------- ------->DAG2       --------->ANAC58            --------->ANAC46<---------AHL20(2)           -------- ------->DOF2<---------AHL20(2)      <---------AHL20(2)       <---------ANAC55(2)          --------->YAB1 --DOF2--------->YAB1   -------->P   --------->AHL20(2)    <---------MYB52(1)           --------->TOE2(3)   aaaagtgaatcatattttttttaagcaaccacacactaattaaaaactcaactccacaaccgttacttaatttctagaaaaattagtttacataaataat  6626300         --------->YAB1         <---------ICU4      --------->YAB1    --------->AHL20(1)    --------->AHL20(2)   --------->YAB1 -->AHL20(1)                                                                                      <-- -->AHL20(2)                                                    <----------DOF2                   <-- ---AHL20(2)           --------->ANAC58                 --------->ARR11(3)                       ---- --AHL20(2)            --------->ANAC58                 <---------ARR11(3)                  <-------- ->AHL20(2)  <---------HSFB2a(2)                    ---------->DOF2     <-----------GT1  <----------DOF2   ttgaaaaataataatctcgaaaatcaagctaaacagtctgagagttgcataaactaaagatgttttctttttttttactaagtgttgttttcttttcatt  6626400                                                                            ------->GAMYB                                                                           <---------MYB111(2)                                                                 --------->ANAC58                                                             --------->ANAC58         <---------At4g35610                                                             --------->ANAC58-------->P                                                         --------->ANAC58  <---------MYB111(1)     <-                                                         --------->ANAC58  --------->MYB46(3)   ----- <-------TEIL                                            --------->ANAC46--------->MYB52(1)     ----- ----MYB46(1)         --------->ATHB12               --------->ANAC46  <---------MYB52(2)       ----- ----MYB83        <-------TEIL                  <-----------------------TaNAC69(2)    --------->At4g35610 ----->MYB59  --------->DAG2  <------NtERF2 ---------->DOF2---------->DOF2 <---------MYB55(2)-------- -YAB1       ---------->DOF2  <---------At4g35610   <-------TEIL --------->ANAC58   <---------bZIP60(1)   aggttcacgatttcgaaaagtacatcagtggcagccacttacaacttaaagacatacacaagaaagcaagtaaactaacaaccatggcatcagaaaccaa  6626500                         <---------------AtSPL8                        <---------------AtSPL8                         ----------->GT1----------->GT1                ----------->GT1--------->TOE2(3)                        --------->DAG2  --------->TOE2(3)       --------->ANAC58      ----------->GT1                       ---------->DOF2  --------->TOE1(3)   <---------ANAC58--------->ANAC55(2) --------TOE2(3)  --------->ANAC58     ----------->GT1      <---------ANAC58<---------ANAC55(2) ->MYB46(1)       --------->ANAC58    <---------TOE2(3)<-----------RAV1(1) <-------TEIL           --- ->MYB83      <---------ANAC58--------->ANAC55(2) --------->ANAC58    --------->DAG2  --------->TOE1(3) --->P   <-----------RAV1(1) <-------TEIL       ---------->DOF2 --------->ANAC58     ----------->GT1< ->MYB46(3)   <---------ANAC58<---------ANAC55(2) --------->ANAC58   ---------->DOF2<---------TOE2(3)   caaggttagccatgttgcatacccaaaaagttacataataaacgttaaaaaaaagccatgttgcatacccaaaaagttacataataaacgttaaaaaaac  6626600  Previous    Next  AGI:  At2g15240.1    Description:  UNC-50 family protein. similar to unknown [Picea sitchensis] (GB:ABK21352.1); similar to Os09g0109500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062566.1); contains InterPro domain UNC-50 (InterPro:IPR007881) Range:  from: 6622607    to: 6626056    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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