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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ZAT6
--------->
YAB1
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
ARR11(3)
<---------
ARR11(3)
--------->
HSFB2a(2)
-
--------->
YAB1
----------->
RAV1(1)
--------->
ARR11(3)
----
<---------
ICU4
--------->
ANAC58
--------->
DAG2
<---------
WOX13(1)
------
<---------
ATHB12
--------->
ANAC58
---------->
DOF2
<---------
ICU4
<-----
<---------
AHL20(2)
--------->
ANAC46
--------->
LBD16
--------->
bZIP60(2)
<-----
------>
GLK1(2)
--------->
ARR11(3)
<---------
HSFB2a(2)
<---------
ALFIN1
----------->
HVH21
aatcttgtttaatcatcagatcataacactccaacaaaacatccagaaagtgatctatacagccacttcatcagtaattgctaaatctaagtgacactgc
6625700
<---------
TOE1(2)
<---------
TOE2(2)
--------->
LBD16
<---------
MYB52(1)
<---------
TOE1(1)
--------->
At5g28300
----->
NtERF2
<---------
TOE2(1)
<---------
ALFIN1
----->
LBD16
--------->
ARR14(2)
--------->
AtMYB61
--->
ZAT14
<---------
ARR14(2)
--------->
MYB46(3)
----
LBD16
<---------
At4g35610
<---------
MYB55(2)
<--
----
ZAT14
--------->
At4g35610
------>
ZmHOX2a(1)
--------->
GLK1(2)
---
ggagccaaaatatcaaatcgattcagctaaatccgaggttttctcatcctctaccaccgtaattcgatctaagagaatgaagaatctatctaaaaatcga
6625800
--------->
ANAC46
<----------
ID1
<<<<<<<<<
GATA-4
--------->
SPL7
<<<<<<<<<
GATA-1
--------->
CCA1(2)
<<<<<<<<<
GATA-3
<---------
TOE2(3)
--------->
WOX13(1)
<---------
TOE1(3)
<------
ZmHOX2a(2)
--------->
MYB52(1)
--------->
ARR11(3)
--------->
TOE1(3)
<---------
CCA1(2)
--------->
ANAC58
--------->
TOE2(3)
<------
-------
MYB59
<<<<<<<<<
GATA-2
<---------
ARR11(3)
--------->
GLK1(2)
---------->
DOF2
--------->
TOE1(2)
------>
TOE2(3)
--------->
ANAC58
<---------
YAB1
<---------
DOF5.7(2)
<---------
HSFB2a(1)
cctaaatctgagatcaatccacgataagctcgagatgtttatgagtaagagaac
cttaacgatacgacgaaagtactgaaggaacattggattagctcgg
6625900
<---------
ANAC46
--------->
ALFIN1
--------->
HSFB2a(2)
<---------
HSFB2a(2)
------>
ZmHOX2a(2)
==================================
HOX2a_HOX2a
--------->
CCA1(2)
<------
ZmHOX2a(2)
===================================
HOX2a_HOX2a
--------->
AGP1
<---------
ARR14(3)
<<<<<<<<<
TBF1
--------->
ARR11(3)
--------->
ARR11(3)
--------->
ARR14(2)
<---------
MYB52(1)
<---------
YAB1
<---------
ARR14(2)
------>
ZmHOX2a(1)
<---------
ARR14(2)
-
<---------
AGP1
======================
HOX2a_HOX2a
<<<<<<<<
<---------
ARR11(3)
<---------
ARR11(3)
<---------
ARR11(3)
<<<<<<<<<
TBF1
--------->
ARR14(3)
--------->
ARR11(3)
--------->
ARR14(2)
<<<<<<<<<
TBF1
-
<---------
GLK1(1)
--------->
REM1(1)
<---------
GLK1(2)
<<<<<<<<<
TBF1
<
---
LBD16
----------->
ARR10
----------->
RAV1(1)
------>
ZmHOX2a(2)
<<<<<<<<<
TBF1
<
gatgaagaagatgaagaacgagatctggaagttgtgggcaacat
cttctcctcccttgtttctgatccagattttgattcttcttcttcttcttcttctt
6626000
------>
ZmHOX2a(2)
<---------
MYB46(3)
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
HSFB2a(1)
<------
ZmHOX2a(2)
<---------
GLK1(1)
<---------
KAN4(2)
-------->
ARR11(3)
--------->
GLK1(1)
<----------
DOF2
<------------
CBF
-----------
<
TBF1
<---------
YAB1
--------->
ARR14(2)
<----------
DOF2
--------->
LBD16
-------->
ARR14(2)
<---------
AGP1
<---------
ARR14(2)
*
TSS
<---------
ANAC46
<---------
ZAT18
---------
ARR14(2)
<---------
ARR11(3)
---------->
ID1
<---------
LBD16
--------->
KAN4(2)
---------
ARR11(3)
--------->
ARR11(3)
<-----------
GT1
<-----------
GT1
--------->
KAN4(1)
cagatcgttttgattcgaaagatctctctggttcgaattctctgcgtttttccttt
tggttattttcgggtttagggattgttcgcttataccgcaatcg
6626100
----------->
GT1
<------
MYB83
<------
MYB46(1)
<---------
MYB46(3)
--------->
MYB59
--------->
MYB46(2)
--------->
MYB52(2)
--------------->
AtSPL3
--------->
SPL7
<---------
MYB55(1)
<---------
SPL7
<---------
ANAC58
<---------
ANAC58
<---------
RAP2.6(2)
<---------
ANAC58
<-------
GAMYB
<---------
MYB52(1)
-
--------->
At4g35610
<---------
MYB52(1)
--
<---------
At4g35610
--------->
ANAC46
<---------
MYB52(1)
<----------
DOF2
<---------
DEAR3(1)
<---------
YAB1
--------------->
AtSPL8
--------->
HSFC1(2)
<---------
ANAC46
<-----------
GT1
---------->
ID1
<---------
ANAC46
---
->
CBF
<---------
HSFC1(2)
<---------
ANAC58
--------->
YAB1
<----------
DOF2
---------->
ID1
<--------
cacccagacgcttcttttttgcagttgcggtctgcgttcggtacaaattatactaaaccgttcctttgttttttttttttgtcgtaaaccgttcctttta
6626200
<---------
ALFIN1
--------->
AtMYB61
<---------
HSFC1(1)
------->
GAMYB
--------->
HSFC1(1)
-------
--------->
MYB46(3)
<---------
HSFB2a(2)
-------
--------->
ANAC58
--------->
ANAC55(2)
<------
---------->
GT1
--------->
ANAC46
--------->
MYB46(3)
--------->
HSFB2a(2)
<-------
------->
DAG2
--------->
ANAC58
--------->
ANAC46
<---------
AHL20(2)
--------
------->
DOF2
<---------
AHL20(2)
<---------
AHL20(2)
<---------
ANAC55(2)
--------->
YAB1
--
DOF2
--------->
YAB1
-------->
P
--------->
AHL20(2)
<---------
MYB52(1)
--------->
TOE2(3)
aaaagtgaatcatattttttttaagcaaccacacactaattaaaaactcaactccacaaccgttacttaatttctagaaaaattagtttacataaataat
6626300
--------->
YAB1
<---------
ICU4
--------->
YAB1
--------->
AHL20(1)
--------->
AHL20(2)
--------->
YAB1
-->
AHL20(1)
<--
-->
AHL20(2)
<----------
DOF2
<--
---
AHL20(2)
--------->
ANAC58
--------->
ARR11(3)
----
--
AHL20(2)
--------->
ANAC58
<---------
ARR11(3)
<--------
->
AHL20(2)
<---------
HSFB2a(2)
---------->
DOF2
<-----------
GT1
<----------
DOF2
ttgaaaaataataatctcgaaaatcaagctaaacagtctgagagttgcataaactaaagatgttttctttttttttactaagtgttgttttcttttcatt
6626400
------->
GAMYB
<---------
MYB111(2)
--------->
ANAC58
--------->
ANAC58
<---------
At4g35610
--------->
ANAC58
-------->
P
--------->
ANAC58
<---------
MYB111(1)
<-
--------->
ANAC58
--------->
MYB46(3)
-----
<-------
TEIL
--------->
ANAC46
--------->
MYB52(1)
-----
----
MYB46(1)
--------->
ATHB12
--------->
ANAC46
<---------
MYB52(2)
-----
----
MYB83
<-------
TEIL
<-----------------------
TaNAC69(2)
--------->
At4g35610
----->
MYB59
--------->
DAG2
<------
NtERF2
---------->
DOF2
---------->
DOF2
<---------
MYB55(2)
--------
-
YAB1
---------->
DOF2
<---------
At4g35610
<-------
TEIL
--------->
ANAC58
<---------
bZIP60(1)
aggttcacgatttcgaaaagtacatcagtggcagccacttacaacttaaagacatacacaagaaagcaagtaaactaacaaccatggcatcagaaaccaa
6626500
<---------------
AtSPL8
<---------------
AtSPL8
----------->
GT1
----------->
GT1
----------->
GT1
--------->
TOE2(3)
--------->
DAG2
--------->
TOE2(3)
--------->
ANAC58
----------->
GT1
---------->
DOF2
--------->
TOE1(3)
<---------
ANAC58
--------->
ANAC55(2)
--------
TOE2(3)
--------->
ANAC58
----------->
GT1
<---------
ANAC58
<---------
ANAC55(2)
->
MYB46(1)
--------->
ANAC58
<---------
TOE2(3)
<-----------
RAV1(1)
<-------
TEIL
---
->
MYB83
<---------
ANAC58
--------->
ANAC55(2)
--------->
ANAC58
--------->
DAG2
--------->
TOE1(3)
--->
P
<-----------
RAV1(1)
<-------
TEIL
---------->
DOF2
--------->
ANAC58
----------->
GT1
<
->
MYB46(3)
<---------
ANAC58
<---------
ANAC55(2)
--------->
ANAC58
---------->
DOF2
<---------
TOE2(3)
caaggttagccatgttgcatacccaaaaagttacataataaacgttaaaaaaaagccatgttgcatacccaaaaagttacataataaacgttaaaaaaac
6626600
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AGI:
At2g15240.1
Description:
UNC-50 family protein. similar to unknown [Picea sitchensis] (GB:ABK21352.1); similar to Os09g0109500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062566.1); contains InterPro domain UNC-50 (InterPro:IPR007881)
Range:
from: 6622607
to: 6626056
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.