Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->ANAC58                             --------->ANAC58                        ------->GAMYB                        --------->DEAR3(1)                        --------->RAP2.6(2)                        --------->ANAC46                       --------->MYB46(3)                       <---------MYB55(2)                       <------------AtMYB77                       --------->DEAR3(2)             <---------ATERF1(1)                       <----                 <-----------ARR10--------->ANAC58    --------->ZAT2                            <----          ---------->DOF2    --------->ANAC58       <---------ALFIN1              ------------------>SPL14     ----------->GT1  <---------At5g28300      --------->ANAC58                  ------>ZmHOX2a(1) <------ZmHOX2a(1)   --------->MYB52(1)        --------->ANAC58      <-----------GT1  ------>ZmHOX2a(1)   cgaggatgtgttaaaagagagtctaaccgccaaggcaagtcccatggataagccccagcctccctctcgtttcactctcgttcctctccttacagtcgag  3450200                                                                                  --------->ANAC58         --------------------->WRI1                                           <---------At4g35610     ---------->ID1                                                           <------NtERF2 --------------------->WRI1                                                <---------ZAT14    <------ <----------DOF2                               <---------ATHB12            --------->ZAT18  --------- -----ZAT2                                   --------->WOX13(1)<---------WOX13(1) --------->ANAC58 -----At4g35610                          ------->TEIL        --------->ATHB12 --------->At4g35610   ctcctttgttccttcggacctctcgcccaaatgaaatgggatgaatccaatcaataagcttattgattgattcagagcgcagcgaagccaaattcaatca  3450300                                                                                             ------>ZmHOX2a(2)                     ------>ZmHOX2a(1)                                                      <------ZmHOX2a(2)                     ----------->TGA1                                                      ------->TEIL               <----------DOF2                                                             --------->ARR14(2)               <---------DAG2                                         --------->DAG2       <---------ARR14(2)       <---------DEAR3(1)<---------At4g35610                       =================================HOX2a_HOX2a     --------->ALFIN1----------->HVH21                             <------ZmHOX2a(1)  --------->CCA1(2) ---------->DOF2   ----------->RAV1(2)                             ================================HOX2a_HOX2a ---ATHB12<---------ANAC58           ------>ZmHOX2a(1)    <---------TOE2(3)      <---------At4g35610- >WOX13(1)<---------ANAC58<----------CDC5             --------->YAB1 ---------->DOF2 --------->ARR11(3)   aggcaaaggggggcttacttttcctgacgctgagtcatcctattcaaatttagctatgctaatgtaacaggaaaagttttcacagatgatatggatccca  3450400                                                               ------>ZmHOX2a(2)                                                              =============================HOX2a_HOX2a                                                              <------ZmHOX2a(2)                                                             <---------ARR14(3)                                                             --------->ARR11(3)                                                             <---------ARR14(2)                                                             --------->ARR14(2)                                         <----------DOF2     <---------ARR11(3)                                        <---------MYB52(1)   --------->ARR14(3)                                   --------->ANAC46          <-----------ARR10                                --------->ZAT18    <------MYB46(1)                                <---------ZAT18    <---------ANAC46                               ------>ZmHOX2a(2)   <------MYB83============================HOX2a_HOX2a                          <---------TOE1(3)       <---------MYB46(3)                 <---------TOE1(2)                          <---------TOE2(3)       --------->MYB55(2)     <-----------HVH21                      <---------ANAC58 --------->At4g35610   --------->AGP1         --------->LBD16          --------->ARR14(2)<------ZmHOX2a(1)    <----------DOF2     <---------LBD16------>ZmHOX2a(1) -------->CCA1(2)     <---------ANAC58 <---------At4g35610 ----------->ARR10      ----------->RAV1(2)   agagatgagcgagaacctccaattgcttaaggatcgcactccgctatcccgcttggtggacgagatcttctctcgggtcatccatcctgggttactgaag  3450500                   <---------MYB59                  ----------------->AGL1               --------->WRKY38(1)        <---------DAG2               ----------->HVH21          <----------DOF2              <-----------HVH21       -------->ZAP1                                               ---            <---------DEAR3(1)       <---------At5g28300                                          ---         <---------ZAT14            <---------WRKY18(1)                                      --------         --------->ZAT2             <-----------GT1                                         <--------         <---------ZAT2            ----------->HVH21                                        --------- <---------SPL7--------->WRKY12    --------->WRKY38(1)    <---------ALFIN1 *TSS <---------ATHB12-----   ggttgtccgactgctcggtgaccgaatcagagaagttttgaccgctttctcttctctccagcactctcggactgatcatccaatccatcttgctgcgaca  3450600   <---------ZAT2                                            <---------DAG2  --------->ANAC58                                           <----------DOF2  --------->ANAC58                                --------->GLK1(2) ------>ANAC58                                   --------->ARR11(3)        <----------ID1  <------ZmHOX2a(1) ------>ANAC58                            <----------DOF2  ----------------->AGL1--------->DAG2 --->RAV1(1)                            <------NtERF2      ----------------->AG ---------->DOF2    -- -ETT(1)                              <---------ZAT18   <----------DOF2  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2) -->HVH21<------ZmHOX2a(1)          ------>NtERF2<---------ARR11(3)   ---------->DOF2  --------->REM1(2) ----->DOF2    ------->TEIL --------->MYB59      <---------GLK1(2)  ----------->HVH21 --------->ALFIN1   aagcaagcttaggaatgaatctaagaaatttaggtctctgcccgcttgaaagattcttctttccttttcggtgaaagagggcaaaagtgtgtaggagaaa  3450700                                                                                          <---------CCA1(1)                                                                                         --------->ARR14(2)                                                                                         <---------ARR14(2)                                                                                         --------->ARR11(3)                                                                                         <---------ARR11(3)                                                                                       xxxxxxxxxxxxxx                                                                                <---------AHL20(2)                                                                               <---------AHL20(1)                                                                               --------->AHL20(1)                                                                              <---------AHL20(2)                                      ------>ZmHOX2a(1)                     <---------AHL20(2)                                     --------->TOE2(3)                   <---------AHL20(2)        --                            ------>NtERF2 ---------->DOF2               --------->AHL20(2)<---------RVE1(1)                            <---------ATERF1(1)                        <---------YAB1 <---------TOE2(3)            <---------DEAR3(1)   <---------ALFIN1   ---------->DOF2   --------->AHL20(2)<------ZmHOX2a(1)            --------->DEAR3(1)--------->ANAC46  ---------->DOF2     --------->ICU4    <---------TOE1(3) ------->GLK1(1)           --------->DEAR3(1)xxxxxxxxxxxxxxxxx>smallRNA(fl3)--------->AHL20(2)     <-   gaattctaaaaacgtcgacgcttaattcgccccctccatccttcaaaagtaaaagaaaggctcaaatatcaatattatatatatatttgaggatatttta  3450800                                                                             --------->GLK1(2)                                                                            <---------GLK1(2)                       <------MYB46(1)                                    <---------ATHB12                       <---------ANAC46                                  ------>MYB83                      <---------DEAR3(1)                                 ------>MYB46(1)                      --------->MYB111(2)                               --------->MYB52(1)        ----------->GT1<------MYB83                                    --------->TOE2(2)        --------->ANAC58                                              --------->MYB46(3)        --------->ANAC58                                              --------->DEAR3(2)      <<<<<<<ZML2    --------->ALFIN1             ----------->GT1     <---------MYB52(2)            <   --------->HSFB2a(2)<---------MYB46(3)        ---------->DOF2       <---------MYB55(2)            -   <---------HSFB2a(2)--------->MYB55(2)       <------ZmHOX2a(1)   <------ZmHOX2a(1)                < xxxxxxxxxxxxx>smallRNA(le3)             --------->ANAC58        --------->ANAC46                  <- ------->ZAT18    --------->DAG2         <---------YAB1          <---------TOE2(3)                <xx --------ZAT18  ---------->DOF2          --------->ANAC58--------->ICU4--------->TOE1(2)        -----   gggccctagaacgcaaaaaaaaggtgggtgaacaagagttgtcacgataggaaagagaaatgactataaggaaccaacgattctctcttcttaaacaacc  3450900                                                                               <---------At4g35610                                                                               --------->At4g35610                                                                            --------->DOF5.7(2)                                                                           <-------GAMYB                                                                           <-----------HVH21                                                                      <------MYB46(1)          --------->ANAC55(1)                                         <------MYB83        <---------ALFIN1                   --------->ANAC58           <---------DEAR3(2)      <---------ALFIN1                     --------->ANAC58          --------->MYB59    ------>ZmHOX2a(1)                     --------->LBD16           <-------TEIL   --------->ANAC46                      --------->LBD16         <---------MYB46(3) ---------ARR11(3)                     ------->GAMYB          <---------MYB46(3) -------->ARR14(2)                   ------>MYB46(1)         --------->ALFIN1  <---------ZAT2 ---------ARR14(2)                   ------>MYB83            <---------ANAC46 --------->MYB52(2) --------CCA1(2)             <---------GLK1(2)         --------->ATHB12   <---------MYB46(3) xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  -------->P  --------->TOE2(3)<---------SPL7   <---------MYB52(1) ---->TOE2(3)   --------->YAB1  <-----------GT1  --------->YAB1<------NtERF2<---------MYB52(1)   ----   tatatcctccacacttaatcagcatttagtagattatccaaccccgagcaatcttagttattggtgggggttcggtccgttagctggtatttgtttagtc  3451000                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                  xxx              <---------ANAC46                   <---------ARR14(2)                              <---              <---------ANAC58         --------->ANAC46          <---------ANAC46              ------              <---------ANAC58       --------->ANAC46          ------->GAMYB         --------->ARR11(3) ----->WOX13(1)                      <---------ALFIN1   <----------DOF2        <---------YAB1  <-----   attcagatagtgactggcgtttttttagctatgcattacacacctcatgtggatttagctttcaacagcgtagaacacattatgagagatgttgaagggg  3451100  Previous    Next  AGI:  At2g07727.1    Description:  cytochrome b (MTCYB) (COB) (CYTB). Identical to Cytochrome b (MT-CYB) [Arabidopsis Thaliana] (GB:P42792;GB:P93289); similar to apocytochrome b [Solanum tuberosum] (GB:CAA41343.1); similar to apocytochrome b [Brassica napus] (GB:YP_717171.1); similar to apocytochrome b [Nicotiana tabacum] (GB:YP_173366.1); contains InterPro domain Transmembrane di-haem cytochrome; (InterPro:IPR016174); contains InterPro domain Cytochrome b/b6, N-terminal; (InterPro:IPR005797); contains InterPro domain Cytochrome b/b6; (InterPro:IPR016175); contains InterPro domain Cytochrome b/b6, C-terminal; (InterPro:IPR005798) Range:  from: 3450575    to: 3452041    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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