Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  >>>>>>>>>GATA-3                                                >>>>>>>>>GATA-4                                           <---------ANAC46                                           --------->ALFIN1             <---------MYB52(1)                                       --------->CCA1(2)              <---------ANAC58                                       <------ZmHOX2a(2)              <---------ANAC58                                      --------->ARR11(3)              <---------ANAC46                                      <---------AGP1                ------>MYB46(1)                                      --------->ARR14(2)            -------->P <---------------AGL15                                      <---------ARR11(3)            ------>MYB83                                      --------->AGP1                --------->MYB52(1)     --------->ANAC58                                      <---------ARR14(2)           --------->MYB55(1)      --------->ANAC58              <---------------------WRI1------>ZmHOX2a(2)         <---------MYB59       <---------ARR14(2)        --------->HSFB2a(2)         ----------->ARR10             --------->AtMYB61     --------->ARR14(2)        <---------HSFB2a(2)    --------->DAG2   >>>>>>>>>GATA-1 <---------ARR11(3)     ==============    --------->GLK1(1)         ---------->DOF2   >>>>>>>>>GATA-2 --------->ARR11(3)     <------ZmHOX2a(1)   agtgagatttctagtacaagatgcgaacaaggtaaagctagatctgtgtggattgaatagaaggaagacctaccgtgagttcaatatgaggaaacgcaga  30115800                   <------ZmHOX2a(1)        ======================HOX2a_HOX2a        ==================HOX2a_HOX2a<---------ARR14(2)        =========================HOX2a_HOX2a        ==============================HOX2a_HOX2a        ------>ZmHOX2a(2)            --------->ARR14(2)            <---------ARR14(2)          ------  --------->At4g35610          <------ZmHOX2a(1)      ----------->GT1               <---------ANAC46  <---------At4g35610  <------ZmHOX2a(1)              <----------ID1                <---------DEAR3(1) ==============HOX2a_HOX2a<------ZmHOX2a(1)         ----------->GT1--------->ARR14(2) <------NtERF2   gtgaagctgatcgagcgatgaggaaggaggagaggaccagattggagaattggaaggcgaaaaacatcggaacctcttagaagagggcggagaagaatta  30115900                       --------->LBD16                      <---------ANAC55(2)                      --------->ANAC58                      --------->ANAC58                      --------->ANAC55(2)                     <---------LBD16                   <---------ARR14(2)                   --------->ARR14(2) <---------O2            ------>ZmHOX2a(2)        <---------ARR14(2)    --------->AtMYB61           --------->GLK1(1)   --------->ANAC46          >>>>>>>>>MYB2                <------ZmHOX2a(2)           <------ZmHOX2a(2)   --------->ANAC58      --------->REM1(2)      --------->At4g35610           <---------GLK1(1)   --------->ANAC58    --------->At5g28300      --------->ZAT2  ---------          <---------ARR11(3)  <---------LBD16     <---------ANAC46          <---------At4g35610   ---          --------->ARR11(3)--------->ARR14(2)    ----------->GT1           <---------ZAT2  --------- --->YAB1 <---------AGP1    <---------ARR14(2)----------->HVH21        ----------->HVH21    ---------   tcgtcgaagtaagatctcttggttccgcaatatacggcagacatggccctggccgtgaaaaccaaaacaagaattgacagctgattcgatccaaacgcga  30116000                                                               ======================HOX2a_HOX2a                                                               <------ZmHOX2a(2)                                                               ==========================HOX2a_HOX2a                                                          ------>NtERF2    <---------TOE1(3)                                    --------->DEAR3(1)    <---------TOE2(3)                                <---------GLK1(1)                   <---------SPL7 >ANAC58                         --------->At4g35610 <---------HSFB2a(1)                <---------ANAC46 ------>AHL20(2)            >>>>>>>>>TBF1           --------->ARR14(2)            <------ZmHOX2a(1) >ANAC58                 >>>>>>>>>TBF1              --------->GLK1(2)         <------ZmHOX2a(1) >ANAC46           <------ZmHOX2a(1)               <---------GLK1(2)        <---------TOE2(3)      <-   taaattagggtttagggagaaggagaagaagaagaagatgactcttgaagaaagaatctccgacgatcgagagagattgaggaaggagcgtcgtaagaga  30116100               --------->GLK1(2)               --------->ARR11(3)               <-----------ARR10               <---------ARR11(3)     <---------ARR11(1)     ------->TEIL     <---------ARR14(2)     --------->ARR14(2)    <---------CCA1(2)                                                    *TSS     <---------MYB59    <---------ARR14(1)                       --------->GLK1(1)         --------->ANAC58  --------->ANAC55(2)                        <---------GLK1(1) ---------->DOF2  --------->ARR11(3)  <---------ANAC55(2)                      <---------ANAC58 --------->TOE2(3)   <---------ARR11(3)---  <---------ANAC58                    --------->ATHB12      --------->YAB1<-----------RAV1(2)   <----  <---------ANAC58            <---------TOE2(3)        <----------DOF2 --------->ANAC58   <----------  <---------ANAC46            <---------TOE1(3)   <----------DOF2    <-----------RAV1(2) <-----------GT1 --------ARR14(2)         <----------DOF2  <---------ANAC58 --------->TOE1(3)<------ZmHOX2a(1)<------   ggtttcgtatctaagaaaatctaatcgggttttaggttttcgattgggtttccttttctttatcttaaaggccaggccaggagaccttattttacccttt  30116200                      ------->PIF5                      <-------PIF5                   <-----------RAV1(2)               --------->At4g35610               <---------At4g35610          <----------DOF2        <------ZmHOX2a(2)                                          --------->LBD16        <---------RVE1(1)                                         <---------ANAC58       <---------AGP1<------NtERF2  <----------DOF2               <---------ANAC58       --------->ARR14(2)         <---------TOE1(2)               <---------ANAC46       --------->AGP1<---------At4g35610                      <-------GAMYB       --------->ARR11(3)      --------->TOE1(1)             <---------ANAC58       <---------ARR11(3)     --------->HSFB2a(2)            <---------ANAC58       <---------ARR14(2)<---------ANAC58                <----------DOF2 ------>AHL20(2)  <------NtERF2--------->TOE2(1)         <-------GAMYB -------TBP ---------->DOF2   <---------HSFB2a(2)       <------NtERF2                           <---- -GT1 <---------CCA1(2)  <---------ANAC58              ------>NtERF2                         <------- ----DOF2------>ZmHOX2a(2)<----------DOF2  --------->WOX13(1)<---------ANAC46    ------>NtERF2-------   ttatatacagatctttaagcggcaggggctttctcgtacttttgttaatcacatgggcgcgttgcgttgcgcgtgaaactccctgccaacgtttttttct  30116300       --------->AHL20(1)                                                        --------->YAB1       <---------AHL20(1)         <-----------GT1                            --------->AHL20(2)       --------->ARR11(3)    <----------DOF2  ---------->DOF2            ------->TEIL ------DOF2            <---------ICU4    <---------MYB52(1)           ----------->GT1 ----GT1              <---------YAB1  ------>NtERF2                   <---------ANAC46         ------ --->ID1         <---------At4g35610---------->ID1        --------->MYB46(3)<---------AHL20(2) ------   tttttcaaatattttgtttatctgataattccttttttgcccccttagtaaagttatctaacaaacaatatgatgtatattatttataaattctgccatg  30116400                                              <-------TEIL                                             <---------ANAC46                                           <---------MYB46(3)                                     <--                                          --------->ALFIN1                                       <---                              <---------At4g35610                        --------->LBD16        ----- ----->GT1                    ----------->RAV1(2)                   <---------ARR14(2)     --------->YAB1 --->AtLEC2                   --------->At4g35610          <---------CCA1(2)            XXXXXXXXXXXXX   taaatcactagaaaatcgacttgaattcattcatctgaagaacagtggtgcataatactgcataccttcgtattccgaatttcatagtaactagcatgaa  30116500                                       <-----------GT1                                    --------->MYB52(2)      <-------MYC3                ------>ZmHOX2a(1)      ------->MYC3                <---------MYB52(1)                       <---------ICU4 -------ICU4                     --------->TOE1(3)                        <---------YAB1          --- ------ATHB12                    --------->TOE2(3)                        --------->ICU4       <----- -->TEIL                      --------->ARR14(2)               --------->TOE2(3)           --------->DAG2 XXXXXXX>MIR4227              <---------ARR14(2)     <-----------GT1    --------->YAB1   ---------->DOF2   tcattccacatggagccaatagaaaacaaacaaatccttagttacaaaatcgattaaaccgattacattatttgtcataatcgttgaatagaaaaggctt  30116600                                                 <----------DOF2                                                 <---------GLK1(1)                                                <---------ANAC58   ----------->GT1             ----------->RAV1(1)                                                <--  <---------TOE2(3)      <------MYB46(1)        <---------ANAC58--------->ZAT6                    <--  <---------TOE1(3)      <------MYB83 ----------->GT1      <---------At4g35610                    --- ------>YAB1            --------->MYB59--------->TOE1(2)   --------->At4g35610             ---------- -----DOF2              <---------AtMYB61<-------TEIL      --------->ZAT2       <---------ANAC46  ---   ttataaggttaattcatcaaactggtttggttccaccagaacgtacaaaggctttcccttcagcttacactgcccctacatatcgtagacaatgagttat  30116700  Previous    Next  AGI:  At1g80040.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G32440.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67646.1); contains InterPro domain UBA-like (InterPro:IPR009060) Range:  from: 30114040    to: 30116173    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g80050.1    Description:  APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2); adenine phosphoribosyltransferase. Identical to Adenine phosphoribosyltransferase 2 (APT2) [Arabidopsis Thaliana] (GB:Q42563;GB:Q39004); similar to APT5 (ADENINE PHOSPHORIBOSYLTRANSFERASE 5), adenine phosphoribosyltransferase [Arabidopsis thaliana] (TAIR:AT5G11160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44252.1); contains InterPro domain Purine/pyrimidine phosphoribosyl transferase, conserved site; (InterPro:IPR002375); contains InterPro domain Adenine phosphoribosyl transferase; (InterPro:IPR005764); contains InterPro domain Phosphoribosyltransferase; (InterPro:IPR000836) Range:  from: 30116407    to: 30118217    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version