Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    ------>ZmHOX2a(2)                                                                             ----- <------ZmHOX2a(2)                                                                              ----- ---------AGP1                                                                                 ------ -------->AGP1                                                                                ------- -------->ARR11(3)                                                                            ------- -----------ARR10                                                                            <------- -------->ARR14(3)                                                                           <------- ---------ARR14(3)                                                                           -------- ---------ARR11(3)                                                                          --------- ---------ARR14(2)                   <---------GLK1(2)      <-------TEIL              <-----------HVH21 -------->ARR14(2)                   --------->ARR14(2)    --------->CCA1(2)         <---------bZIP60(1) --------CCA1(2)                <---------ZAT2             --------->GLK1(2)         --------->bZIP60(1) -------->ARR10                 <---------At4g35610  ------>ZmHOX2a(2)             <-------GAMYB----- ---->LBD16                     --------->At4g35610 <---------At4g35610           =================== --->DEAR3(1)                   --------->ZAT2      --------->At4g35610   <---------ICU4    --------- -->ANAC46                <-----------HVH21    =============HOX2a_HOX2a  <---------YAB1     --------- >AtMYB61                --------->ANAC46      ------>ZmHOX2a(1)         <---------ATHB12 --------->MYB46(3) -ALFIN1           <---------CCA1(2) <---------ARR14(2)    --------->ARR14(1)     <-----------RAV1(1)   cagatcttgtctaaacgactcttatctccgtcgcagctcgattcgcatcctgtgatctgagattcgatgtctgtaatcaatgctctgttgtcacaaccaa  29983800   --------->O2   <---------O2 ->MYB83 ->MYB46(1) --->MYB52(1) -->AtMYB61 >GAMYB --MYB55(2)             <---------YAB1                                        <-------GAMYB --MYB52(2)        <------MYB46(1)                 ----------->GT1           --------->MYB52(2)    -- ->MYB46(3)        <------MYB83                   <---------AtMYB61     --------->ANAC55(2)       <-- >ANAC58          <---------DEAR3(1)    <----------DOF2   <---------TOE2(3)  <---------MYB46(3)<----- ------>RAV1(2)   <---------DREB2C(2)  --------->TOE2(3)---------->DOF2 <---------ANAC58    <------NtERF2 =======RAV       <---------MYB46(3)  ----------------->AGL1            <---------ANAC58   --------->LBD16 >ANAC58  --------->ARR14(2) --------->DAG2    <-----------HVH21       <---------LBD16   <---------LBD16 >ANAC46  <---------ARR14(2)---------->DOF2 <---------LBD16         <----------DOF2   --------->MYB46(3)   ctgagacgagacgattcgagtcggtgatgaaaaagggacttcctttaccggtgaggtttaaaggaagaggctttacgggtcgttgagaacagccggagga  29983900           <---------AHL20(2)                                                                    ----          --------->AHL20(2)                                                               --------->MYB52(1)    --------->LBD16                                                                        <---------ARR14(2)  <---------At4g35610                                                            ====================  <---------LBD16                                                                ------>ZmHOX2a(2)  --------->At4g35610             <------------AtMYB77                           ================HOX2a_HOX2a --------->MYB52(1)        --------->LBD16   <---------At4g35610               --------->ARR11(3)---- --------->HVH21          <---------ANAC46<---------At4g35610                  <---------ARR11(3)<--- ---------HVH21     --------->MYB46(3)<---------ETT(2)                     <-------GAMYB  <------ZmHOX2a(1) -ZmHOX2a(1) <---------TOE2(3) <------ZmHOX2a(1)                          <-----------RAV1(1)    <---   agtcaccggagatttaatgtgaacaactccgtaggaactgtcgatgctgcttcgaagagtgatgctaactaattctctgttgatcttatagaggaacgga  29984000                <---------DEAR3(1)              <---------ZAT2             <---------AtMYB61             --------->ALFIN1         <---------LBD16        <---------At5g28300        --------->MYB52(1)       <-----------GT1   <------ZmHOX2a(1) <---------TOE1(3)                                                                        --------->GLK1(2) <---------TOE2(3)  <---------At4g35610                                                  <---------GLK1(2) ----->At4g35610--------->ALFIN1                                                     --------->DAG2 =========HOX2a_HOX2a  <-------GAMYB  <---------SPL7                                ---------->DOF2 ----->ZAT2  <---------DEAR3(1)      --------->TOE1(1)                        ---------->DOF2 ------ZAT2--------->LBD16   --------->ANAC46 <---------MYB46(3)            <---------HSFB2a(2) ------At4g35610<---------AtMYB61    --------->TOE2(1)             <---------SPL7<----------ID1  ----   gctaaggatttaccggaggtggtgctgttacagacaacctcgtaccagtcgttgagaaaacagtctcttcgtccgattccaaaaggaaaaggaatctcga  29984100             --------->At5g28300             <-------GAMYB            ----------->GT1          <-------TEIL         --------->ARR14(1)         --------->CCA1(2)         ------------>MYB.PH3(1)        --------->ARR11(1)        --------->ARR14(2)        <---------ARR14(2)        <---------GLK1(2)                                  ---------->DOF2   <---------ALFIN1                            --------->ZAT2  <------ZmHOX2a(1)   ----------->RAV1(1)                         --------->At4g35610                   <------ZmHOX2a(1) ------>ZmHOX2a(1)            >>>>>>>>>TBF1    <---------At4g35610    --------->YAB1<---------YAB1 ----->ARR14(2)  <---------ANAC55(2) --------->ALFIN1    <---------YAB1            --------->MYB59  -   ttcctccacagatacggttacatgaagttgaagaagaaggtggagattgagctgtcgttatcaaaggaccattgatgaacagagttaggatagagagtag  29984200                                                                                     <---------RAP2.6(3)                                                                                    --------->RAP2.3(3)                                                                                    --------->DEAR3(1)                                                                                    --------->RAP2.3(2)                                                                                  <---------At4g35610                                                                             <------------CBF                                                                            -------->ATHB1                                                                            --------->ATHB51                                                                            --------->ATHB12                                                                           --------->ICU4        ---------->DOF2                    *TSS                            <---------ATHB51  ----------->GT1           <---------AHL20(2)<----------DOF2              <---------AHL20(2) ---------->GT1  ------>ZmHOX2a(1)      --------->YAB1   ---------->DOF2   <---------YAB1   aacagagaaaaaaagtctccttctcttcattttttttttctctaatgacttttatgtatgaaagttctattttagaaattattgagccgtctcgttggaa  29984300                                      <--------HAHB4                                      --------->YAB1                                  --------->ICU4                              <------ZmHOX2a(2)                              ------------>CBF                                                    ---                       <---------WRKY12                                                           ---                      --------->WRKY18(1)                                                       -----                     <-----------HVH21<---------ICU4                                     --------->ATHB51                    ------->GAMYB <---------ATHB12                                       <---------ICU4                  <<<<<<<<<<<<WRKY18 <---------YAB1                                      <--------HAHB4                 --------->MYB52(1)<---------ICU4                                       --------->ICU4                 <---------DOF5.7(2)<-----------GT1                                     <---------YAB1                <---------WRKY38(1)--------->YAB1                                --------->ICU4<-----                <---------WRKY12--------->WOX13(1)                          ----------->GT1 ---------     <---------ARR11(3)<---------WRKY38(1)         --------->ANAC46  <---------ATHB12 --------->YAB1   tttggaagttctattttgtcaacggtcaagggatcaattatcattacaagtttacacaacttattgtccaaatcaattttgtaatttttcataattagaa  29984400                                      <---------HSFB2a(2)                                      <-----------RAV1(2) ------>TOE2(3)                      <---------LBD16 ------>YAB1              --------->YAB1                                             <------ZmHOX2a(1) ---->GLK1(2)            <---------YAB1 <---------At4g35610                       <---------LBD16   - ----GLK1(2)        <-----------GT1<-----------GT1         <---------YAB1  <---------YAB1         <-- >YAB1      <-----------GT1   <---------AHL20(2)   ---------->DOF2     <---------GLK1(2)   <---------   tcttaattttagttatacgattttactatcattttttttcccagatgatataacaaagttgattattcacatagattattaatatcaggaaattgactat  29984500     ------->GAMYB                                                  ------>ZmHOX2a(1)    --------->ANAC58                                              ------>ZmHOX2a(2)                 <    --------->ANAC58                        --------->TOE2(3)    <------ZmHOX2a(2)                 <-    --------->ANAC46                        --------->YAB1      <---------ARR11(3)                 <-   ------>MYB83                           --------->ARR11(3)    --------->ARR14(2)                 <-   ------>MYB46(1)                   --------->WRKY45           <---------ARR14(2)             <----- --------->DEAR3(1)                  --------->WRKY38(1)        --------->ARR11(3)             <----- --------->AtMYB61      <---------ZAT14   <---------ARR11(3)   <------ZmHOX2a(1)   --------->HSFC1(2) -------->MYB46(3)      --------->ZAT18>>>>>>>>>WRKY6      --------->MYB52(1)      <---------HSFC1(2) ---------GT1  --------->YAB1    --------->DAG2            ---------->DOF2         --------->HSFB2a(1) --GT1    <---------ATHB12      ---------->DOF2    --------->TOE2(3)<----------DOF2<---------HSFB2a(1)   tcaccaacgcaaatcattcatatgtgtgcaatggaaaagttgactatcttaattcttaaactaaaggatccttttcatcagtcgaaatttctaaattatg  29984600    <---------TOE2(3)    <---------TOE1(3)          <---------ICU4                                                       - -------GAMYB               --------->YAB1                                                         -- -----MYB83                <---------TOE2(3)                                       <-------TEIL    <- -----MYB46(1)             <---------YAB1                                      <---------TOE1(3)  --- --------MYB46(3)         <-----------GT1                             <---------ARR14(2)     ------>ZmHOX2a(2) ----YAB1                --------->YAB1                               --------->ARR14(2)   <---------ARR11(3) ------RAV1(1)        --------->WOX13(1)                   --------->ATHB12    <---------TOE2(3)  <--   ttggttaaggttccatcacattgtcaattaacataatttctgttaaaccgaaatgaattggtcattgagtcgaatcggattaaggttcaacatgatccat  29984700  Previous    Next  AGI:  At1g79670.1    Description:  RFO1 (RESISTANCE TO FUSARIUM OXYSPORUM 1); kinase. Identical to Wall-associated receptor kinase-like 22 precursor (WAKL22) [Arabidopsis Thaliana] (GB:Q8RY17;GB:Q4JQ55;GB:Q9MA08); similar to WAKL2 (WALL ASSOCIATED KINASE-LIKE 2), kinase [Arabidopsis thaliana] (TAIR:AT1G16130.1); similar to WAKL4 (WALL ASSOCIATED KINASE-LIKE 4), kinase [Arabidopsis thaliana] (TAIR:AT1G16150.1); similar to WAKL5 (WALL ASSOCIATED KINASE-LIKE 5), kinase [Arabidopsis thaliana] (TAIR:AT1G16160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67876.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro dom Range:  from: 29981618    to: 29984243    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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