Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                                 <---                                                                                            ---------                                                                             <---------LBD16---------                                                                            <<<<<<<<<<E2Fc <---------                                                                            <<<<<<<<<<E2Fd --------->LBD16                                                                            <<<<<<<<<<E2Fa<---------ANAC58                                                                            <<<<<<<<<<E2Fe--------->O2                                                                        <---------DAG2    <---------O2        <----------DOF2                                              <-----------GT1      <---------ANAC46  --------->YAB1                                                --------->ARR14(2)   --------->YAB1 ---->TOE2(3)                                        <---------GLK1(2)  <----------DOF2   <---------ANAC58 ---->YAB1         <---------ANAC55(1)   --------->YAB1         <---------ARR14(2)  <---------YAB1 -MYB52(1)   <---------TOE2(3)          <------ZmHOX2a(2)   <---------At4g35610--------->LBD16 <-----   ttaatgaaaacttttgagattacgagttgtctaatttctccgatcaaaacacataaattctcagcgaatagtcacttttcccgcttatcatcccgtggcc  29746200                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                            <--------                                                                                        <---------ANAC46                                                                                     ----------->HVH21                                                                                    ------->MYC3                                                                                   <---------bZIP60(2)                                                                                   --------->TGA1a                                                                                   <---------TGA1a  <                                                                                   ==================                                                                                   --------->ANAC55(2)                                                                                   ==================                                                                                   --------->O2     -                                                         --------->YAB1            --------->ANAC46 < ------At4g35610                                     <---------AHL20(2)            --------->bZIP60(1) ---NtERF2                                     <---------MYB59                     <---------bZIP60(1) -->HVH21                         <---------At4g35610--------->ATHB12              <---------O2   --- >ALFIN1                          <---------ZAT2    <---------AHL20(2)             <---------ANAC55(2) --HVH21               <---------At4g35610     --------->TOE2(3)     <-----------GT1<-------MYC3  --- ----RAP2.6(2)     <---------ALFIN1        --------->WRKY12    --------->YAB1 <---------CCA1(2) <----   gcttatccatactcttgatcaacacagcttatcgctagctgttcgatgaccttatttattgataatcaaaataaccccttatatcacgtgacctatatat  29746300        <---------ICU4        --------->YAB1        -------->HAHB4        --------->ATHB12       <---------ATHB12       <---------YAB1       --------->ICU4      <---------TOE2(3)     --------->YAB1   <---------YAB1  --------->TOE2(3) --------->ATHB12 <---------ICU4          <---------DAG2 --------->YAB1          <----------DOF2 <--------HAHB4   ------->GAMYB ->AHL20(2)      <---------MYB55(2) --ARR11(3)      --------->MYB46(3) ->AHL20(1)     ------>MYB46(1) --AHL20(1)    --------->MYB55(1) -CCA1(2)     <---------MYB46(2) ---------YAB1<---------MYB111(2)                                             ---------->ARF1 =========================MYC_MYB                                     <---------TOE2(3)       ------- ========================MYC_MYB                                      <---------TOE1(3)      <------- -------->ICU4<---------MYB111(1)                                   ---------->DOF2          -------- ---------ATHB12------>MYB83                                  --------->AHL20(1)             <------- ------>WOX13(1)-------->P    ---------->ID1                  <---------AHL20(1)        <---------AHL20(2) ------>YAB1  <---------MYB59<-----------GT1      <-------TEIL--------->ARR11(3)        --------->AHL20(2) -----AHL20(2)--------->MYB46(3)              <---------YAB1  <---------ARR11(3)       --------->AHL20(2)   taatcattaatgattaccaacctccaacttttttccttctgtattagtatgattcatgaacaaatatttttaaaggttttgtctcccaaatttataaggt  29746400                      --------->MYB59           --------->KAN4(2)          <----------TaMYB80          <---------HSFB2a(1)          --------->HSFB2a(1)          <---------HSFC1(2)                                         ----------->GT1          --------->HSFC1(2)                                        --------->DAG2 <---------DAG2   <---------ZAT6                                   ---------->DOF2 <----------DOF2--------->LBD16                          <---------TOE2(3)   --------->GLK1(2)------- ---->GT1<---------KAN4(2)--------->YAB1 --------->AHL20(2)     <---------AHL20(2)            ------- --TOE1(3)<---------KAN4(1)  -------->HAHB4   ---------->DOF2   --------->AHL20(2)           <------- ->DAG2  ---------->TaMYB80  --------->YAB1<---------TOE2(3)<---------AHL20(2)  ----------->GT1   --- --TOE2(3)--------->KAN4(1) <---------YAB1---------->DOF2----------->GT1<-----------GT1    <---------MYB46(3)   aaactttttggaatattccagagttagataataatagtttccattaaagaaagacaattaagttaattaaaaagttactaatctgtgaattagccgttga  29746500                                                                           <---------TGA1a                                                                           ----------->RAV1(2)                                                                           <---------O2                                                                           --------->ZAT2                                                                           --------->O2                                                                           --------->TGA1a                                                                           <---------ZAT2                                                                         <---------ALFIN1                                                                        --------->ATERF1(1)                                                                        --------->DEAR4(2)                                                                        <------NtERF2                                                                       <-----------HVH21                                                                       <---------ATERF1(1)                                                                     ------->PIF5                                                                     <-------PIF5                                                                     ------->MYC2                                                                     <-------MYC3          --------->LBD16                                            <-------PIF4         --------->ANAC58                                            <-------MYC2         --------->ANAC46                                            ------->PIF4         --------->ANAC58                                           --------->ANAC58         --------->DEAR3(1)                               --------->At5g28300        --------->ATERF1(1)                     <---------ALFIN1    --------->ANAC58        --------->RAP2.3(1)                    <------NtERF2        <---------ATERF1(1)        <------NtERF2                --------->LBD16     <---------ANAC46--------->DEAR3(1)        --------->ERF1               --------->At5g28300<---------DEAR3(1)------>NtERF2       <---------RAP2.3(1)          <---------ANAC46   --------->ZAT14 ------>NtERF2       <---------ATERF1(1)          <---------ANAC58   <---------ZAT14--------->ANAC58      --------->ARR14(2)            <---------ANAC58   <---------ZAT18--------->ANAC58   --------->YAB1      <---------ARR14(2)           <-----------------------TaNAC69(2)------->MYC3 <---------MYB46(3) -->WRKY12------>NtERF2           <---------At5g28300  --------->ZAT18--------->ANAC46  <---------YAB1 -->WRKY38(1)                   XXXXXXXXXXXXXXXXXXXX>MIR782         --------->ANAC46  --------->YAB1 --MYB52(1)              ------->GAMYB        ------>NtERF2     --------->ANAC58  ----------->GT1  <- --->ZmHOX2a(2)       ----------->RAV1(1)    --------->PCF2     --------->ANAC58  <---------ANAC46<--   tccgagaggctccgccattggctccaacagaacaaataccgtgaatgcccccactagtgcggtgagaagcacgcgccacctgggtcgtttataataactg  29746600             <---------PCF2             --------->TCP16(1)             --------->PCF5        <---------ANAC58        <---------ANAC58                                               ---------->DOF2 --------AtLEC2<------NtERF2             ------->GAMYB    <-----------HVH21       <----------DOF2 -------MYB46(3) <---------ALFIN1        *TSS    <---------MYB52(2) --------->TOE2(3)   tggatggcattcgtggcccctactctccaaaacaaactcacaacgctccaaacaaaccattgtcactcatccataaacctctctctttcttctctctctc  29746700                                                            ----------->HVH21                                                           <-----------HVH21                                                          --------->LBD16                                                        <---------LBD16                                                      --------->ANAC46                                 <------NtERF2  <---------ANAC58                <---------MYB52(1)         <---------MYB46(3)               <-------GAMYB   <---------DEAR3(1)    ------->TEIL               <---------At4g35610         --------->MYB52(2)              <---------MYB46(3)------>NtERF2   <---------ANAC58         ------>ZmHOX2a(2)    --------->SPL7<-------GAMYB<---------DEAR3(1) <---------ANAC58       <---------ARR14(2)    --------->MYB52(1) <---------AtLEC2            <---------ANAC58       <-       --------->ARR11(3)    ------>NtERF2 <-----------RAV1(1)              <---------ANAC46      <--       <---------AGP1   <-----------GT1 ------------>MYB.PH3(2)   <---------ANAC58       <---------At5g28300       --------->ARR14(2)   ----------->HVH21   <---------ANAC46  <---------ANAC58      <-----------GT1   tctcgtttggatctggccgttgattttctcccgacggcgataagtttgttgcatgaacgccggtgatggcttctgtttgcgtcaacaatgttactgtttc  29746800                                                                          ===========================                                                             <---------DEAR3(1)                                                          --------->MYB55(2)                                                         --------->ALFIN1 ===========================                                                         <---------AtMYB61------>ZmHOX2a(2)                                                   <---------O2          ============================                                                   --------->bZIP60(1)   ============================               <---------ANAC55(2)                 <---------bZIP60(1)   <------ZmHOX2a(2)               <---------ANAC46                  --------->REM1(2)      <---------ARR14(2)          <               --------->ANAC55(2)              ----------->HVH21    <---------HSFB2a(2)         <---              <---------LBD16                   ----------->TGA1     --------->HSFB2a(2)   <---------         ------>ZmHOX2a(1)             <----------DOF2<---------DEAR3(1)--------->ARR14(2) ----------     <-----------GT1                   =================bZIP_DOF    <---------LBD16      <---------ARR14(2)  --------->ARR14(2)            <-------PIF5   <-----------HVH21  --------->ARR14(2)     --------->GLK1(2)  <---------ARR14(2)       <<<<<<<<<GATA-1    <---------TGA1a--------->ETT(1)           <---------ARR14(2)  <---------ARR11(3)       <<<<<<<<<GATA-4    <---------ANAC58    <---------ARR14(2)   <---------HSFB2a(1)  <---------GLK1(2)        <<<<<<<<<GATA-2    <---------ANAC58   <---------GLK1(1)     <----------TaMYB80 <------ZmHOX2a(1)         <<<<<<<<<GATA-3    <---------O2<---------MYB46(3)           --------->HSFC1(2) --------TOE1(2)         --------->WOX13(1) --------->At4g35610  --------->GLK1(1)     --------->HSFB2a(1) -------LBD16--------->MYB52(1) ------->PIF5<---------At4g35610<------NtERF2<-----------HVH21--------   tcaggattttcctacttacggatgtttcaatccacgagcttctttcagccgtgacgacggtggtcggagttctggatccgtcgcatcggagattccgaag  29746900               <---------ZAT2      --------->At4g35610                      <------ZmHOX2a(2)      --------->ZAT14                         --------->ARR11(3) ===HOX2a_HOX2a--------->At4g35610            --------->ARR14(2) ======HOX2a_HOX2a                            --------->GLK1(2) ======HOX2a_HOX2a                            <---------ARR14(2)            <----------DOF2      ---- ===HOX2a_HOX2a--------->ZAT2                <------ZmHOX2a(1)        <----------CDC5     --------->ZAT14 ------ZmHOX2a(1) ----------->GT1         <------ZmHOX2a(1)     <-----------RAV1(2)     --------->At5g28300 ---ZmHOX2a(1) <---------At4g35610        =============HOX2a_HOX2a<---------At4g35610  ----------->GT1 --------AGL1 <---------ARR14(2) <---------TOE1(3)        <---------HSFB2a(1)       ------>NtERF2---- ------->AGL1<------NtERF2       <---------TOE2(3)        --------->HSFB2a(1)      --------->DEAR3(1) ->LBD16 <-----------HVH21       --------->MYB59------>ZmHOX2a(2) <---------ZAT2   ----------->HVH21   gaggaaacagcagtcggagctggtgatttcgagtttaggttagaggaggatccagtcggaatgctcccagccgatgagcttttctccgacggtaaactcg  29747000                                                                                        --------->ICU4                                                                                        <---------ATHB51                                                                                        <---------YAB1                                                                                     ----------->GT1                                                                                    <------NtERF2                                                                                  <---------DEAR3(1)                                                                                  --------->ALFIN1                                                                                 --------->ATERF1(1)                                                                                 <---------ABI4(1)                                                                                --------->ALFIN1                                                                                <---------ANAC58                                       --------->GLK1(1)                        <---------ANAC58                                    <<<<<<<<<<E2Fb                             --------->ALFIN1                                    <------NtERF2                              <---------DEAR3(1)                                   --------->LBD16                           --------->LBD16                               ======================HOX2a_HOX2a         ------>ZmHOX2a(2)                               ------>ZmHOX2a(2)                        <------ZmHOX2a(2)                               <---------DEAR3(1)                       <---------GLK1(1)                              ==========================HOX2a_HOX2a     --------->GLK1(1)                              =======================HOX2a_HOX2a       --------->ARR11(3)                              <------ZmHOX2a(2)                        <---------ARR14(3)                      --------->MYB52(1)   <-----------RAV1(2)         --------->ARR14(3)                     ----------->HVH21--------->ARR14(2)  <---------ANAC58   <---------LBD16                  ------->GAMYB=========================HOX2a_HOX2a    <---------ARR14(2)                 --------->MYB46(3)------>NtERF2          <---------ANAC46  <---------LBD16           --------->MYB46(3)<---------ARR14(2)  <------ZmHOX2a(1)     <---------ARR11(3)           --------->REM1(1) --------->ARR14(2)  ===============================HOX2a_HOX2a         ----------->RAV1(1)--------->GLK1(1) <------ZmHOX2a(1)        --------->ARR14(2)<---------ICU4       --------->At4g35610  <---------GLK1(1) ==================================HOX2a_HOX2a    --------->At4g35610    ----------->ARR10  =================================HOX2a_HOX2a ------->TGA1  ----------->RAV1(1)<---------ANAC46        <---------ANAC58 <---------LBD16    <------ ------->HVH21--------->MYB46(3) <---------LBD16 ==============================HOX2a_HOX2a    <------   tgacgaagcagcaacaacaacagacgacggagatcggcgggaaatgcaggaggatggaagtcgtggagattgagatctccgggggtggcgataattgctc  29747100  Previous    Next  AGI:  At1g79060.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G56020.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69700.1) Range:  from: 29746641    to: 29748493    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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