Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<---
<---
---------
<---------
LBD16
---------
<<<<<<<<<<
E2Fc
<---------
<<<<<<<<<<
E2Fd
--------->
LBD16
<<<<<<<<<<
E2Fa
<---------
ANAC58
<<<<<<<<<<
E2Fe
--------->
O2
<---------
DAG2
<---------
O2
<----------
DOF2
<-----------
GT1
<---------
ANAC46
--------->
YAB1
<---------
ARR14(2)
--------->
YAB1
---->
TOE2(3)
<---------
GLK1(2)
<----------
DOF2
<---------
ANAC58
---->
YAB1
<---------
ANAC55(1)
--------->
YAB1
--------->
ARR14(2)
<---------
YAB1
-
MYB52(1)
<---------
TOE2(3)
<------
ZmHOX2a(2)
<---------
At4g35610
--------->
LBD16
<-----
ttaatgaaaacttttgagattacgagttgtctaatttctccgatcaaaacacataaattctcagcgaatagtcacttttcccgcttatcatcccgtggcc
29746200
--------
<-------
--------
<-------
<--------
<---------
ANAC46
----------->
HVH21
------->
MYC3
<---------
bZIP60(2)
--------->
TGA1a
<---------
TGA1a
<
==================
<---------
ANAC55(2)
--------->
O2
-
==================
--------->
YAB1
--------->
ANAC46
<
------
At4g35610
<---------
AHL20(2)
--------->
bZIP60(1)
---
NtERF2
--------->
TOE2(3)
--------->
ANAC55(2)
>
ALFIN1
<---------
ZAT2
<---------
AHL20(2)
<---------
bZIP60(1)
-->
HVH21
<---------
At4g35610
--------->
ATHB12
<---------
O2
---
--
HVH21
<---------
At4g35610
<---------
MYB59
<-----------
GT1
<-------
MYC3
---
----
RAP2.6(2)
<---------
ALFIN1
--------->
WRKY12
--------->
YAB1
<---------
CCA1(2)
<----
gcttatccatactcttgatcaacacagcttatcgctagctgttcgatgaccttatttattgataatcaaaataaccccttatatcacgtgacctatatat
29746300
--------->
ATHB12
<---------
ICU4
-------->
HAHB4
--------->
YAB1
<---------
ATHB12
--------->
ICU4
<---------
YAB1
<---------
TOE2(3)
--------->
YAB1
<---------
YAB1
--------->
TOE2(3)
<--------
HAHB4
--------->
ATHB12
<---------
DAG2
<---------
ICU4
<----------
DOF2
--------->
YAB1
------->
GAMYB
->
AHL20(1)
--------->
MYB46(3)
--
ARR11(3)
<---------
MYB55(2)
->
AHL20(2)
------>
MYB83
--
AHL20(1)
--------->
MYB55(1)
-
CCA1(2)
<---------
MYB111(1)
---------
YAB1
<---------
MYB111(2)
---------->
ARF1
=========================
MYC_MYB
<---------
TOE2(3)
-------
-------->
ICU4
<---------
MYB59
---------->
ID1
<---------
TOE1(3)
<-------
========================
MYC_MYB
---------->
DOF2
--------
---------
ATHB12
------>
MYB46(1)
--------->
AHL20(1)
<-------
------>
YAB1
<---------
MYB46(2)
<---------
AHL20(1)
<---------
AHL20(2)
------>
WOX13(1)
-------->
P
<-----------
GT1
<-------
TEIL
--------->
ARR11(3)
--------->
AHL20(2)
-----
AHL20(2)
--------->
MYB46(3)
<---------
YAB1
<---------
ARR11(3)
--------->
AHL20(2)
taatcattaatgattaccaacctccaacttttttccttctgtattagtatgattcatgaacaaatatttttaaaggttttgtctcccaaatttataaggt
29746400
--------->
MYB59
--------->
KAN4(2)
--------->
KAN4(1)
<----------
TaMYB80
<---------
HSFC1(2)
--------->
HSFC1(2)
----------->
GT1
<---------
HSFB2a(1)
--------->
DAG2
<---------
DAG2
<---------
ZAT6
---------->
DOF2
<----------
DOF2
--------->
LBD16
----------->
GT1
<-----------
GT1
-------
---->
GT1
<---------
KAN4(2)
--------->
YAB1
--------->
AHL20(2)
<---------
AHL20(2)
<-------
--
TOE1(3)
<---------
KAN4(1)
-------->
HAHB4
---------->
DOF2
--------->
AHL20(2)
<---------
MYB46(3)
->
DAG2
---------->
TaMYB80
<---------
YAB1
---------->
DOF2
<---------
TOE2(3)
--------->
GLK1(2)
-------
--
TOE2(3)
--------->
HSFB2a(1)
--------->
YAB1
<---------
TOE2(3)
<---------
AHL20(2)
----------->
GT1
---
aaactttttggaatattccagagttagataataatagtttccattaaagaaagacaattaagttaattaaaaagttactaatctgtgaattagccgttga
29746500
--------->
TGA1a
<---------
ZAT2
----------->
RAV1(2)
--------->
ZAT2
<---------
O2
<---------
TGA1a
--------->
O2
--------->
DEAR3(1)
--------->
ATERF1(1)
--------->
DEAR4(2)
<------
NtERF2
<---------
ATERF1(1)
------>
NtERF2
<-------
PIF5
------->
PIF5
------->
PIF4
<-------
PIF4
------>
NtERF2
<-------
MYC2
--------->
ANAC58
------->
MYC2
--------->
ANAC58
------->
MYC3
--------->
ANAC46
--------->
ANAC58
--------->
DEAR3(1)
--------->
At5g28300
--------->
RAP2.3(1)
<---------
ALFIN1
--------->
ANAC58
--------->
ATERF1(1)
<------
NtERF2
<---------
ATERF1(1)
<------
NtERF2
--------->
LBD16
<---------
ANAC46
<---------
ALFIN1
--------->
ERF1
--------->
At5g28300
<---------
DEAR3(1)
------>
NtERF2
<---------
RAP2.3(1)
<---------
ANAC46
<---------
ZAT14
<-----------
HVH21
<---------
ATERF1(1)
<---------
ANAC58
--------->
ZAT14
--------->
ANAC58
<---------
ARR14(2)
<---------
ANAC58
<---------
ZAT18
--------->
ANAC46
--------->
YAB1
--------->
ARR14(2)
<-----------------------
TaNAC69(2)
<-------
MYC3
----------->
GT1
<-
-->
WRKY38(1)
<---------
At5g28300
--------->
ZAT18
--------->
ANAC58
<---------
YAB1
--
MYB52(1)
XXXXXXXXXXXXXXXXXXXX>
MIR782
--------->
ANAC46
--------->
YAB1
-->
WRKY12
--------->
LBD16
------->
GAMYB
------>
NtERF2
--------->
ANAC58
<---------
ANAC46
<--
--->
ZmHOX2a(2)
----------->
RAV1(1)
--------->
PCF2
--------->
ANAC58
<---------
MYB46(3)
tccgagaggctccgccattggctccaacagaacaaataccgtgaatgcccccactagtgcggtgagaagcacgcgccacctgggtcgtttataataactg
29746600
<---------
PCF2
--------->
TCP16(1)
--------->
PCF5
<---------
ANAC58
<---------
ANAC58
---------->
DOF2
--------
AtLEC2
<------
NtERF2
------->
GAMYB
<-----------
HVH21
<----------
DOF2
-------
MYB46(3)
<---------
ALFIN1
*
TSS
<---------
MYB52(2)
--------->
TOE2(3)
tggatggcattcgtggcccctactctccaaaacaaactca
caacgctccaaacaaaccattgtcactcatccataaacctctctctttcttctctctctc
29746700
----------->
HVH21
<-----------
HVH21
--------->
LBD16
<---------
LBD16
--------->
ANAC46
<------
NtERF2
<---------
ANAC58
<---------
MYB52(1)
<---------
MYB46(3)
<-------
GAMYB
<---------
DEAR3(1)
------->
TEIL
<---------
At4g35610
--------->
MYB52(2)
<---------
MYB46(3)
------>
NtERF2
<---------
ANAC58
------>
ZmHOX2a(2)
--------->
SPL7
<-------
GAMYB
<---------
DEAR3(1)
<---------
ANAC58
<---------
ARR14(2)
--------->
MYB52(1)
<---------
AtLEC2
<---------
ANAC58
<-
--------->
ARR11(3)
------>
NtERF2
<-----------
RAV1(1)
<---------
ANAC46
<--
<---------
AGP1
<-----------
GT1
------------>
MYB.PH3(2)
<---------
ANAC58
<---------
At5g28300
--------->
ARR14(2)
----------->
HVH21
<---------
ANAC46
<---------
ANAC58
<-----------
GT1
tctcgtttggatctggccgttgattttctcccgacggcgataagtttgttgcatgaacgccggtg
atggcttctgtttgcgtcaacaatgttactgtttc
29746800
------>
ZmHOX2a(2)
<---------
DEAR3(1)
--------->
MYB55(2)
--------->
ALFIN1
===========================
<---------
AtMYB61
===========================
<---------
O2
============================
--------->
bZIP60(1)
============================
<---------
ANAC55(2)
<---------
bZIP60(1)
<------
ZmHOX2a(2)
<---------
ANAC46
--------->
REM1(2)
--------->
ARR14(2)
<
--------->
ANAC55(2)
----------->
HVH21
<---------
HSFB2a(2)
<---
<---------
LBD16
----------->
TGA1
--------->
HSFB2a(2)
----------
------>
ZmHOX2a(1)
<----------
DOF2
<---------
DEAR3(1)
<---------
ARR14(2)
<---------
<-----------
GT1
=================
bZIP_DOF
<---------
LBD16
--------->
GLK1(2)
--------->
ARR14(2)
<-------
PIF5
<-----------
HVH21
<---------
ARR14(2)
<---------
ARR14(2)
<---------
ARR14(2)
<<<<<<<<<
GATA-1
<---------
TGA1a
--------->
ETT(1)
<---------
ARR14(2)
<---------
ARR11(3)
<<<<<<<<<
GATA-4
<---------
ANAC58
--------->
ARR14(2)
<----------
TaMYB80
<---------
GLK1(2)
<<<<<<<<<
GATA-2
<---------
ANAC58
<---------
GLK1(1)
--------->
HSFB2a(1)
<------
ZmHOX2a(1)
<<<<<<<<<
GATA-3
<---------
O2
<---------
MYB46(3)
--------->
HSFC1(2)
--------
TOE1(2)
--------->
WOX13(1)
<---------
At4g35610
--------->
GLK1(1)
<---------
HSFB2a(1)
-------
LBD16
--------->
MYB52(1)
------->
PIF5
--------->
At4g35610
<------
NtERF2
<-----------
HVH21
--------
tcaggattttcctacttacggatgtttcaatccacgagcttctttcagccgtgacgacggtggtcggagttctggatccgtcgcatcggagattccgaag
29746900
<---------
ZAT2
--------->
At4g35610
<------
ZmHOX2a(2)
--------->
ZAT14
--------->
ARR14(2)
======
HOX2a_HOX2a
--------->
ARR11(3)
===
HOX2a_HOX2a
--------->
At4g35610
<---------
ARR14(2)
===
HOX2a_HOX2a
--------->
ZAT2
--------->
GLK1(2)
<----------
DOF2
----
======
HOX2a_HOX2a
<------
ZmHOX2a(1)
<----------
CDC5
--------->
ZAT14
------
ZmHOX2a(1)
----------->
GT1
<------
ZmHOX2a(1)
<-----------
RAV1(2)
--------->
At5g28300
---
ZmHOX2a(1)
<---------
At4g35610
=============
HOX2a_HOX2a
<---------
At4g35610
----------->
GT1
------->
AGL1
<---------
ARR14(2)
--------->
MYB59
------>
ZmHOX2a(2)
<---------
ZAT2
------>
NtERF2
----
--------
AGL1
<------
NtERF2
<---------
TOE1(3)
--------->
HSFB2a(1)
--------->
DEAR3(1)
->
LBD16
<-----------
HVH21
<---------
TOE2(3)
<---------
HSFB2a(1)
----------->
HVH21
gaggaaacagcagtcggagctggtgatttcgagtttaggttagaggaggatccagtcggaatgctcccagccgatgagcttttctccgacggtaaactcg
29747000
--------->
ICU4
<---------
ATHB51
<---------
YAB1
----------->
GT1
<------
NtERF2
--------->
ALFIN1
<---------
DEAR3(1)
--------->
ATERF1(1)
<---------
ABI4(1)
--------->
ALFIN1
<---------
ANAC58
--------->
GLK1(1)
<---------
ANAC58
<<<<<<<<<<
E2Fb
--------->
ALFIN1
<------
NtERF2
<---------
DEAR3(1)
--------->
LBD16
<---------
LBD16
<---------
DEAR3(1)
------>
ZmHOX2a(2)
======================
HOX2a_HOX2a
--------->
GLK1(1)
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
==========================
HOX2a_HOX2a
<---------
GLK1(1)
=======================
HOX2a_HOX2a
--------->
ARR14(3)
<------
ZmHOX2a(2)
--------->
ARR11(3)
--------->
MYB52(1)
<-----------
RAV1(2)
<---------
ARR11(3)
----------->
HVH21
--------->
ARR14(2)
<---------
ANAC58
--------->
LBD16
------->
GAMYB
=========================
HOX2a_HOX2a
<---------
ARR14(2)
--------->
MYB46(3)
------>
NtERF2
<---------
ANAC58
<---------
LBD16
--------->
MYB46(3)
<---------
ARR14(2)
===============================
HOX2a_HOX2a
--------->
REM1(1)
--------->
ARR14(2)
<------
ZmHOX2a(1)
<---------
ARR14(3)
----------->
RAV1(1)
--------->
GLK1(1)
<------
ZmHOX2a(1)
--------->
ARR14(2)
<---------
ICU4
--------->
At4g35610
<---------
GLK1(1)
=================================
HOX2a_HOX2a
--------->
At4g35610
----------->
ARR10
==================================
HOX2a_HOX2a
------->
HVH21
----------->
RAV1(1)
<---------
ANAC46
<---------
ANAC46
<---------
LBD16
<------
------->
TGA1
--------->
MYB46(3)
<---------
LBD16
==============================
HOX2a_HOX2a
<------
tgacgaagcagcaacaacaacagacgacggagatcggcgggaaatgcaggaggatggaagtcgtggagattgagatctccgggggtggcgataattgctc
29747100
Previous
Next
AGI:
At1g79060.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G56020.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69700.1)
Range:
from: 29746641
to: 29748493
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.