Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <----------DOF2                           <---------O2                           --------->O2                           --------->TGA1a                           <---------TGA1a                           =================bZIP_DOF                           =================bZIP_DOF                          <------NtERF2                         ------>NtERF2  --------->At4g35610                        ----------->HVH21                        --------->RAP2.3(3)                        --------->DEAR3(1)                       --------->DEAR3(2)    --------->GLK1(2)  --------->ATERF1(1)                     <---------ZAT14   <---------ARR14(2) --------->At4g35610                    <---------ZAT2   <---------GLK1(2)  <---------At4g35610             ---------->DOF2<------ZmHOX2a(1)           >>>>   tcgacgattctgtaacttcacttgagccgacgagtctttagtagcttcagaggtttgaaagcgagcacagaggatgaagacatagaagacgaagacgaag  29122000                                                            --------->ANAC58                                                            --------->ANAC58                                               <---------DAG2                                   --------->YAB1        <------NtERF2                                  <-------TEIL <----------DOF2                                --------->ARR14(2)      --------->ANAC58             ---------->DOF2                      <---------At4g35610    ------>ZmHOX2a(1)---------->DOF2     --------->AtMYB61      <---------TOE2(3)     <---------LBD16 <-----------------AGL1         --------->ARR14(2)      <---------TOE1(3) <----------DOF2     <-----------------AGL3         <---------ARR14(2)    ---------->DOF2<---------At4g35610<---------ICU4    --------->ANAC58  ------>MYB83 <---------TOE2(3) >>>>>TBF1      <----------DOF2 <---------ARR14(2)      <------NtERF2     ------>MYB46(1)     <------   aagaagtaaaggtttcttctttgctgcttattcggattcatcatctcctctttttggcccccaagaaagcgaaaccaaatcccaccaaaaaggtttcttt  29122100                                                                                             --------                                                                                             --------                                                        <------ZmHOX2a(1)  <---------CCA1(2) --------                        <----------DOF2     --------->At4g35610        --------->AHL20(2)  --------->ZAT6                --------->DAG2              --------->ZAT2      <---------ARR14(2) ------>ZmHOX2a(2)               ---------->DOF2              <---------At4g35610 --------->ARR14(2)--------->GLK1(1) ----DOF2 ----------->RAV1(1) <----------DOF2           ==================================HOX2a_HOX2a   tttgacacagggcaacaaaaaggaggctttttctttgtagaattgctgctcccttataggagtgagtatttgtttatatatctgatctctctcacactca  29122200                                             <------------CBF                                          <---------------AGL15                                          --------------->AGL15                                        ----------->GT1                                        --------->At4g35610                                       --------->ANAC58                                       --------->ANAC58                                      --------->SPL7              <---------ZAT2         <---------MYB52(1)                                         -----              --------->At4g35610  --------->ANAC55(2)                                   ------->GAMYB <---------ANAC46                  --------->ANAC46                                   <---------ALFIN1 <---------ANAC58                 <---------HSFB2a(2)                              --------->ANAC46 <---------ANAC58        <----------DOF2<---------At4g35610                       ------->GAMYB <---- ->ANAC58     <---------At4g35610 <---------LBD16                                --------->DEAR3(1)-- ->ANAC46     --------->ZAT2  <---------GLK1(1)                          <---------GLK1(2)      <---- ->ANAC58    ----------->RAV1(1)*TSS--------->LBD16                  ---------->DOF2  --------->MYB52(1)   atttcgtgcaacttgcagcagaggtttctttgagttcccgtaagctaaattgagaaacttggcatttggctaaaagaaactcaacgcccaacgctcacta  29122300                           <------ZmHOX2a(1)                      ------>MYB46(1)                      -------->P                   <------NtERF2                  ------>NtERF2                 --------->ANAC58                 --------->ANAC58                 --------->ANAC46                <-------PIF4                ------->PIF5                ------->MYC3                <-------MYC2                <-------PIF5                ------->MYC2                      ------>ZmHOX2a(2)                ------->PIF4 <---------WOX13(1)  <------ZmHOX2a(2)                <-------MYC3<------------CBF    <---------ARR14(2)         ---------->DOF2   ==============================HOX2a_HOX2a       --------->REM1(2)   =============================HOX2a_HOX2a    <---------ANAC46  ------>MYB83              --------->ARR14(2)    <---------ANAC58 ------>NtERF2              --------->ARR11(3)      <---------ARR11(3)    <---------ANAC58--------->DEAR3(1)          <---------ARR11(3)      --------->ARR14(2) ---->ZAT14    <---------ATERF1(1)             ------->GAMYB            <---------ARR14(2) -----ZAT14    --------->ANAC58             --------->MYB52(1)     ------------>CBF ------->ANAC46--------->ANAC58           <---------MYB59        --------->PCF2------>NtERF2 -----ZAT18    --------->ANAC46     ---------->DOF2              <---------ZAT18   cacttagcgtgtaaagcacgcgccaaccaggattgactcaaaggcctaacgatcttcaaatgtacagggcccaatatactcggcccataaactctaaaac  29122400                         <---------At4g35610                         ----------->RAV1(2)                      <-------TEIL                     --------->DOF5.7(2)                                    ----------->HVH21                   <---------ANAC58                                       <------MYB83                   <---------ANAC46                                       <---------ANAC58                   <---------ANAC58                                       <------MYB46(1)                ----------->HVH21                                         <---------ANAC58              <---------ANAC58                  --------->YAB1           --------->MYB55(2)              <---------TGA1a                   <---------ICU4           <---------MYB46(3)     -----              <---------ANAC55(2)              --------->ICU4           --------->ALFIN1       ======              <---------ANAC58      <---------ZAT2         <---------ARR11(3)                  <-----              --------->TGA1a       <---------At4g35610    <---------ARR14(2)                 <------              --------->ANAC55(2)   --------->At4g35610    --------->ARR11(3)                 -------              <------NtERF2         *TSS       <---------ATHB12      --------->ATHB12     <------ZmHOX2a(2)             ------>NtERF2          --------->ZAT2<---------YAB1    <---------YAB1       --------->AGP1         --------->MYB46(2)       <-----------RAV1(2)      --------->ARR14(2)<---------ATERF1(1)=====   tattcaaatgttaggcgcgtgacgttcacctgtgaatcagctgatagaaatcattatccaatatccagttatgagtgggtgactccaaatagatccaact  29122500                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                                  <--                -------->ABF1                                                                     ---                <-------MYC2                                                                      ---                ------->MYC4                                                                      ---                <-------MYC3                                                                      ---                ------->MYC2                                             ----------->HVH21        ---                ------->MYC3                                           <---------ANAC58           <--                <-------MYC4                                           <---------ANAC58           ---               =================bZIP_DOF                               --------->TGA1a            ---               <---------ANAC55(2)                                     --------->ANAC55(2)       ----               --------->ANAC55(2)                                     <---------ANAC55(2)       ----               --------->O2                                           --------->SPL7             ----       -------->ATHB1                                             <------NtERF2                  ----       --------->ATHB12                                          ------>NtERF2                   ----       --------->ATHB51                                         --------->DEAR3(1)               ----      <---------YAB1                                      --------->ARR14(2)                     ----  --------->ANAC58                                    --------->LBD16 <-------TEIL              <----  --------->ANAC58   <----------DOF2                  ------>NtERF2 <---------SPL7              ----- -->GAMYB      --------->TGA1a               --------->ARR14(2) <---------ALFIN1                ----- ========================MYC_MYB             <---------ARR14(2) ------------------>SPL14        ----- -------AtMYB77<--------ABF1              <---------ANAC46<---------MYB52(1)                    <---- ---ZAT2       <---------O2             --------->LBD16   <---------ARR14(2)                    ----- -->ZAT2       <---------TGA1a          ------>NtERF2--------->DEAR3(1)<---------TGA1a         ------ ========================MYC_MYB      <---------LBD16--------->ANAC46 ------->TEIL             ------   ggcaacgcattattgacacgtgtcttttcatttctcttcttccggcgttttctctccgccgtttcgccaccgtacgtgacaatgtctgtttctctctccg  29122600                                                 <---------ALFIN1                                                ----------->HVH21                                                <---------MYB52(1) ------NtERF2                                   <------NtERF2 --------ATERF1(1)                             <-----------TGA1 ---->NtERF2                                   ------>NtERF2 ------->ABI4(1)                               <-----------HVH21 ------>RRTF1(2)                               <---------ATERF1(1) -------ALFIN1                                --------->bZIP60(1) ------>ATERF1(2)                             <---------ATERF1(2) ------>RAP2.3(2)                             --------->O2 ------>DREB2C(2)                             --------->RRTF1(3) ------>RAP2.6(2)                             --------->ANAC46 ------>DEAR3(1)                              --------->RAP2.3(3) -------ATERF1(2)                             --------->DEAR3(1) ------>RAP2.3(3)                             --------->ATERF1(2) ------>RRTF1(3)                              --------->RAP2.3(2) ----->ATERF1(1)                              --------->RAP2.6(2) ----->ERF1                                   --------->RRTF1(2) ----->RRTF1(1)                              --------->RAP2.3(1) ----->RAP2.6(1)                             --------->ERF1 ----->ORA47(2)                              --------->RRTF1(1) ----->RAP2.3(1)                            ------>NtERF2                 <-------GAMYB ----->DEAR4(2)                             --------->LBD16              <---------MYB46(3) -----At4g35610                             <---------ATERF1(1)          <---------ANAC58 ---->ABI4(1)                              --------->ANAC46              <---------ANAC58 ->NtERF2                                  <---------ALFIN1            <-----------HVH21 ---->LBD16                         <----------DOF2                 ----------->RAV1(2) -----ATERF1(1)             <---------GLK1(2)<------NtERF2      <-----------HVH21 ---->At4g35610        ----------->RAV1(1) --------->DEAR3(1)  --------->TOE2(1)             -------- --->DEAR3(1)         <---------ALFIN1    <---------LBD16      --------->TOE1(1)         ------>ZmHOX2a(1) --->ANAC46         ------>ZmHOX2a(1)     --------->MYB46(3)  ------>ZmHOX2a(1)  <----------DOF2   <-   ccgcctctcacttactctgttcctccaccagagtctctctttcccccgccgtcacctcttcgtcctcgtcccctgtcgttgctctttcttcctctacatc  29122700                                                                 --------------->AtSPL8                                                                 --------------->AtSPL3              <---------HSFB2a(1)                  <---------ANAC58              --------->HSFC1(2)                   <---------ANAC58               <---------DAG2              --------->HSFB2a(1)                ------>ZmHOX2a(1)   --------->SPL7   ----------->GT1  <---------GLK1(2)                           ------>ZmHOX2a(1)  <---------------AtSPL3 ->REM1(1)    <---------HSFC1(2)        <---------ALFIN1  <-----------RAV1(2)     <----------DOF2 --------ALFIN1 <-----------HVH21      ------>ZmHOX2a(1)<----------DOF2      --------->YAB1   gccacattctcttggaagcgtcgcatcttcttctctgtttcctcactcctccttcgtgcttcaggtattcgtacttcattcatactttttgtaaatttct  29122800                                                                                              <------                                                                                              -------                                                                                              <------                                                                    <-----------GT1          ------->TEIL                                                               --------->ATHB12        <-----------RAV1(1)                                               <----------ID1 <---------YAB1         <---------At4g35610                                         <------ZmHOX2a(2)  <------ZmHOX2a(1)     <---------At4g35610                                         ==========================HOX2a_HOX2a    ------>NtERF2                 <-------GAMYB     --------->TOE1(2)      xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                <-----------RAV1(1)--------->TOE2(2)     ------->PIF5           <---------RAP2.6(2)    --------->YAB1<---------MYB52(1)     <---------ATHB12<-------PIF5         --------->ALFIN1-------   ctccgaacataacattttctgttgattttagaaaaaacatccgatcaatgggacgagcacgaggatgatttcaccaaaatgtgccgcttctgatgcagct  29122900  Previous    Next  AGI:  At1g77480.1    Description:  nucellin protein, putative. similar to nucellin protein, putative [Arabidopsis thaliana] (TAIR:AT1G44130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61887.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007); contains InterPro domain Peptidase A1; (InterPro:IPR001461) Range:  from: 29119452    to: 29122232    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g77490.1    Description:  TAPX; L-ascorbate peroxidase. Identical to L-ascorbate peroxidase T, chloroplast precursor (APXT) [Arabidopsis Thaliana] (GB:Q42593;GB:Q9CAQ6); similar to SAPX, L-ascorbate peroxidase [Arabidopsis thaliana] (TAIR:AT4G08390.2); similar to SAPX, L-ascorbate peroxidase [Arabidopsis thaliana] (TAIR:AT4G08390.1); similar to thylakoid-bound ascorbate peroxidase [Brassica oleracea] (GB:BAD14931.1); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Plant ascorbate peroxidase; (InterPro:IPR002207); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016) Range:  from: 29122436    to: 29125109    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version