Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->TOE2(3)               <---------ICU4             --------->GLK1(2)          --------->LBD16          --------->ANAC58         --------->HSFB2a(2)       --------->ANAC58         <---------HSFB2a(2)       --------->ANAC46        <---------LBD16 ---------->DOF2                                              --------->ANAC58  <----------DOF2    --------->TOE1(3)                  <------ZmHOX2a(1)            --------->ANAC58  <---------DAG2   <---------ARR11(3)                 --------->MYB59          ---------->DOF2   catactttttcccagaatcaataccttaaatcaaaccaagaaacttaaatgtgaattaggaaacaatttcaaggagactaagaaagtaagcaaattatcg  27760500                                                                     <----------ID1                                                                   --------->ANAC46                                                                   --------->ANAC58                                                                   --------->ANAC58                                                                  --------->SPL7                                                                 <---------MYB52(1)                                                              ------>ZmHOX2a(2)                    <-                                                          <---------YAB1      ---------->DOF2     ---                                                        <---------ICU4    ---------->DOF2        <---                                --------->ANAC58        --------->YAB1----------->RAV1(1)        ----                                --------->ANAC58      --------->ARR11(3)--------->MYB46(3)      <----                              ---------->DOF2<---------ARR14(2) --------->LBD16                 =====                             --------->AtMYB61  ----------->GT1<---------ANAC55(2)              =====      <------ZmHOX2a(1)  ----------->HVH21   --------->ARR14(2)--------->ANAC55(2) --------->MYB52(1)   aattagaaggagactgagactgattcagtgaccaaagcaaacttagggattcgaaaaatcatgatccgtaagcaacaaaagaaaggaacggattaagagg  27760600            <----------DOF2          <------ZmHOX2a(2)         <---------ARR11(3)         --------->ARR11(3)         --------->ARR14(2)         <---------ARR14(2)         <---------ARR14(3)         --------->ARR14(3)         --------->GLK1(2)         <-----------ARR10        <------ZmHOX2a(1)    --------->ZAT14    --------->At4g35610       <---------GLK1(1) ------TEIL------>ZmHOX2a(2)                     --------->GLK1(1) ------>CCA1(2)        <---------At4g35610     <------ZmHOX2a(1)   <---------MYB52(1) ------ARR14(2)   ----------->RAV1(2)  <---------ANAC46         <---------TOE2(3) ----->ARR14(2)  ------>NtERF2         <---------ANAC58        <---------DOF5.7(2)                 <- --ZmHOX2a(1)   <---------RAP2.6(2)    <---------ANAC58      --------->DOF5.7(2)             <------- ================HOX2a_HOX2a      --------->ARR11(3)  ---------->DOF2  ---------->ID1       <-------- =================HOX2a_HOX2a     <---------ARR11(3)----------------->AGL1               <-----------RAV1(2)   atacagttcaggatctttgcgcctgagctcatcgaacatctgcttgtaaggagttccaaagtcgtaaacgtttggctctctcagagatggtccaggtagt  27760700                       --------->ANAC58                   --------->SPL7                                             <---------YAB1        <                  --------->SPL1(1)      <---------CCA1(2)                 --------->ARR14(2)       -                 <---------SPL7       ------>ZmHOX2a(1)                    <---------ARR14(2)       <                <---------ANAC55(2)  <---------ANAC58       --------->At4g35610                     < ----------GT1 --------------->AtSPL3<---------ANAC58       <---------At4g35610                     < -P  ----------->HVH21 --------->ANAC58  ---------->ID1<---------ANAC58  --------->LBD16       ------ -MYB52(1)  <-----------HVH21<-----------HVH21         <---------ANAC58<---------LBD16    --------->MYB46(3)   tttacatgtgacccagtcccgtacgaagcaacgtcgagtccttgtctcttaagaagagcgtgagcttccatgctccggttctgattcgacgaacaaacca  27760800                       <-----------HVH21                       ------>NtERF2                      --------->DEAR3(1)                      <---------ANAC46                      <---------DEAR3(1)                     --------->ATERF1(1)                     --------->RAP2.3(1)                    <---------ATERF1(1)                    ------>NtERF2                    <---------RAP2.6(1)                    <---------RAP2.3(1)                    <---------DEAR4(2)                    <---------ORA47(2)                    <---------RRTF1(1)                    <---------ERF1        --------->ARR14(2)        <---------GLK1(2)                                 ------------>AtMYB77        <---------ARR14(2)      --------->GLK1(2)        ----------->TGA1      --------->LBD16<------NtERF2                       ----------->HVH21     <---------HSFB2a(2)       --------->GLK1(1)    ------>NtERF2                                   -     --------->HSFB2a(2)<------NtERF2              --------->DEAR3(1)                               <    <---------LBD16<---------DEAR3(1)              ----------->HVH21                               <-   --------->SPL7  <---------RAP2.3(2)            --------->RAP2.3(1)                              --   --------->MYB52(1)--------->RRTF1(1)           <------NtERF2                                  ---- <---------SPL7   --------->ATERF1(1)            ------>NtERF2                                  <---- ---------ANAC58  <---------LBD16                --------->LBD16                               ------ -------->ANAC55(2)<---------RAP2.3(3)           <---------ATERF1(1)       ---------->DOF2  <-------- ---------ANAC46  <---------ABI4(1)             --------->LBD16         *TSS               --------->ARR11(3) ---------ANAC55(2)--------->DEAR3(1)          <---------LBD16        ----------->GT1      <---------ARR11(3) ---------ANAC58<---------DEAR3(1)          <-----------GT1 <---------ANAC46               <---------GLK1(2) --->ATHB12--------->TOE2(3)   <---------GLK1(1)<---------LBD16   <-----------GT1         <---------RVE1(1)   ttgcgtaccggaacctcatcggcggcgtcgaagaaatctgtgattttttcccggcgactgtgacggtttcacaagttaaaagtcgatttcagagattttt  27760900       <---------ANAC46    ----------->HVH21                                                      <---------ANAC58 ------->HAHB4                                                             <---------ANAC58 ---------ICU4                           <---------SPL7          <-----------GT1 --------ATHB51                          --------->LBD16  --------->AHL20(1)             --------->ANAC58 ------->ICU4                            <------NtERF2    <---------AHL20(1)             --------->ANAC58 ----->YAB1                      <---------ICU4           <---------ARR11(3)  <---------YAB1 -----AHL20(2)         ----------->HVH21--------->RAP2.6(2)  <---------AHL20(2)          --------->ANAC46 --->AHL20(2)  <------------CBF  --------->ATHB12         --------->ARR11(3)<----------DOF2 -RVE1(1) <------------CBF      <---------YAB1      <------ZmHOX2a(2) <---------ICU4    --------->LBD16   aataatgcgacggattgaattgggcctgaaactgatcatgggccggactaagagatcgaatattttttttcatttttgcttttattgacccacgaaaatt  27761000                                                     <---------ATHB12                                                     --------->MYB46(3)                                                    ------>MYB46(1)                                                    ------>MYB83                                                   --------->WOX13(1)                      <------NtERF2                                                ------>MYB83                              <---------DEAR3(2)                                                ------>MYB46(1)                          <---------RAP2.6(2)                                                -------->P                               <---------DEAR3(1)                                               --------->MYB55(1)                       --------->RAP2.6(3)                                              <---------MYB46(2)                       --------->ARR14(2)                                              <---------MYB111(1)                      <-----------HVH21                                              <---------MYB59  ----------->RAV1(1)     <---------ARR14(2)                                              --------->MYB46(3)                     --------->LBD16                           <---------ICU4     <---------MYB55(2)             ----------------->AG      <-----------GT1   --------->YAB1        <---------MYB111(2) ------->GAMYB    <---------LBD16 <------MYB83  <---------At4g35610      <------ZmHOX2a(1)<---------ICU4      ----------------->AGL1 <------MYB46(1)       <---------ATHB12--------->ZAT18--------->YAB1    --------->ATHB12--------->ATERF1(1)   gtttggttttacatttaagctactaatcaacatcacaagagaggactacctaccaatcaacatcacaacagagacgattgcctaaaccgggtcggcctgg  27761100                            --------->ANAC46                            --------->ANAC58                    <------NtERF2                   ------>NtERF2                   <---------RAP2.3(1)                  <---------RAP2.6(2)                  <---------ANAC46                  <---------RAP2.3(2)                  <---------DEAR3(1)                 --------->ATERF1(1)            --------->ARR14(2)                      --------->MYB52(1)                 <------NtERF2             <-------TEIL     <---------ARR11(3)          ------>MYB46(1)                <---------DEAR4(2)--------->LBD16           --------->ARR11(3)          ------>MYB83                <---------ATERF1(1) <---------PCF5<------NtERF2                       <---------MYB59                <---------RAP2.3(1)----------->HVH21<---------DEAR3(2)     --------->ANAC58               --------->ALFIN1 <---------LBD16<------ZmHOX2a(1)           --------->ANAC46               <---------DEAR3(1)<---------LBD16<---------ARR14(2)         --------->ANAC58              <------ZmHOX2a(1)--------->MYB52(1) --------->ATERF1(1)    --------->MYB52(1)       <---------ANAC46     --------->ANAC58<-----------RAV1(2)<----------DOF2       --------->MYB46(3)   actccaaggtcgtagaggaggcggctatacaagtaccgggaccggtacaggagccggttcaagaacttttggattaaacggaagcgaaccaaacagtttt  27761200                           --------->At4g35610                           --------->ZAT2                         <---------DEAR3(1)                         <---------RAP2.6(2)                        <---------At4g35610                        --------->GLK1(1)                    --------->ALFIN1                               <---------GLK1(1)                <                   ------->PIF5                                   <---------ARR14(2)                -                   <-------PIF5                                   --------->ARR14(2)               <-                  <---------ANAC46    <---------YAB1             <------ZmHOX2a(1)                <--               <---------ZAT18     --------->ICU4     <------ZmHOX2a(1)                     ---------   aagagtagaagaagtagtggacgtggagcggctggacatgatgatagcatcgttgaggagtactcgaggaactccatttcgatgtcttccttcgccgaag  27761300                                                         ---------->DOF2                                                    --------->AHL20(2)                                                  <---------AHL20(2)                  --------->AHL20(2)                                          <---------ANAC55(1)                         <---------AHL20(2)                                          --------->ANAC55(2)                     --------->AHL20(2)                                          <---------ANAC55(2)                     <---------AHL20(2)     ------->TEIL                         <---------ANAC58                    <----------DOF2 ---------At4g35610         <-----------HVH21     --------->AHL20(2)       <---------ARR11(3) -------->At4g35610       --------->MYB59 <---------ANAC46       ---------->DOF2 --------->AHL20(2) ------TEIL   <------ZmHOX2a(2)           <---------ANAC58   <----------ID1--------->ARR11(3) ------P     <---------ARR11(3)         <-----------GT1 <---------AHL20(2)<------ZmHOX2a(1) >DEAR3(1)   --------->ARR11(3)      <---------ICU4 <---------AHL20(2)    ===========================   gtagatgaatatgaagatcaaaacatgtaaggtcacccatatttacgtgtatatatatataaagagacaaagaagaggaccttttaaattatatgtttat  27761400  Previous    Next  AGI:  At1g73820.1    Description:  Ssu72-like family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO67337.1); contains InterPro domain Ssu72-like protein (InterPro:IPR006811) Range:  from: 27759173    to: 27760872    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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