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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
TOE2(3)
<---------
ICU4
--------->
GLK1(2)
--------->
LBD16
--------->
ANAC58
--------->
HSFB2a(2)
--------->
ANAC58
<---------
HSFB2a(2)
--------->
ANAC46
<---------
LBD16
---------->
DOF2
--------->
ANAC58
<----------
DOF2
--------->
TOE1(3)
<------
ZmHOX2a(1)
--------->
ANAC58
<---------
DAG2
<---------
ARR11(3)
--------->
MYB59
---------->
DOF2
catactttttcccagaatcaataccttaaatcaaaccaagaaacttaaatgtgaattaggaaacaatttcaaggagactaagaaagtaagcaaattatcg
27760500
<----------
ID1
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
--------->
SPL7
<---------
MYB52(1)
------>
ZmHOX2a(2)
<-
<---------
YAB1
---------->
DOF2
---
<---------
ICU4
---------->
DOF2
<---
--------->
ANAC58
--------->
YAB1
----------->
RAV1(1)
----
--------->
ANAC58
--------->
ARR11(3)
--------->
MYB46(3)
<----
---------->
DOF2
<---------
ARR14(2)
--------->
LBD16
=====
--------->
AtMYB61
----------->
GT1
<---------
ANAC55(2)
=====
<------
ZmHOX2a(1)
----------->
HVH21
--------->
ARR14(2)
--------->
ANAC55(2)
--------->
MYB52(1)
aattagaaggagactgagactgattcagtgaccaaagcaaacttagggattcgaaaaatcatgatccgtaagcaacaaaagaaaggaacggattaagagg
27760600
<----------
DOF2
<------
ZmHOX2a(2)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
ARR14(2)
<---------
ARR14(2)
<---------
ARR14(3)
--------->
ARR14(3)
--------->
GLK1(2)
<-----------
ARR10
<------
ZmHOX2a(1)
--------->
ZAT14
--------->
At4g35610
<---------
GLK1(1)
------
TEIL
------>
ZmHOX2a(2)
--------->
GLK1(1)
------>
CCA1(2)
<---------
At4g35610
<------
ZmHOX2a(1)
<---------
MYB52(1)
------
ARR14(2)
----------->
RAV1(2)
<---------
ANAC46
<---------
TOE2(3)
----->
ARR14(2)
------>
NtERF2
<---------
ANAC58
<---------
DOF5.7(2)
<-
--
ZmHOX2a(1)
<---------
RAP2.6(2)
<---------
ANAC58
--------->
DOF5.7(2)
<-------
================
HOX2a_HOX2a
--------->
ARR11(3)
---------->
DOF2
---------->
ID1
<--------
=================
HOX2a_HOX2a
<---------
ARR11(3)
----------------->
AGL1
<-----------
RAV1(2)
atac
agttcaggatctttgcgcctgagctcatcgaacatctgcttgtaaggagttccaaagtcgtaaacgtttggctctctcagagatggtccaggtagt
27760700
--------->
ANAC58
--------->
SPL7
<---------
YAB1
<
--------->
SPL1(1)
<---------
CCA1(2)
--------->
ARR14(2)
-
<---------
SPL7
------>
ZmHOX2a(1)
<---------
ARR14(2)
<
<---------
ANAC55(2)
<---------
ANAC58
--------->
At4g35610
<
----------
GT1
--------------->
AtSPL3
<---------
ANAC58
<---------
At4g35610
<
-
P
----------->
HVH21
--------->
ANAC58
---------->
ID1
<---------
ANAC58
--------->
LBD16
------
-
MYB52(1)
<-----------
HVH21
<-----------
HVH21
<---------
ANAC58
<---------
LBD16
--------->
MYB46(3)
tttacatgtgacccagtcccgtacgaagcaacgtcgagtccttgtctcttaagaagagcgtgagcttccatgctccggttctgattcgacgaacaaacca
27760800
<-----------
HVH21
------>
NtERF2
--------->
DEAR3(1)
<---------
ANAC46
<---------
DEAR3(1)
--------->
ATERF1(1)
--------->
RAP2.3(1)
<---------
ATERF1(1)
------>
NtERF2
<---------
RAP2.6(1)
<---------
RAP2.3(1)
<---------
DEAR4(2)
<---------
ORA47(2)
<---------
RRTF1(1)
<---------
ERF1
--------->
ARR14(2)
<---------
GLK1(2)
------------>
AtMYB77
<---------
ARR14(2)
--------->
GLK1(2)
----------->
TGA1
--------->
LBD16
<------
NtERF2
----------->
HVH21
<---------
HSFB2a(2)
--------->
GLK1(1)
------>
NtERF2
-
--------->
HSFB2a(2)
<------
NtERF2
--------->
DEAR3(1)
<
<---------
LBD16
<---------
DEAR3(1)
----------->
HVH21
<-
--------->
SPL7
<---------
RAP2.3(2)
--------->
RAP2.3(1)
--
--------->
MYB52(1)
--------->
RRTF1(1)
<------
NtERF2
----
<---------
SPL7
--------->
ATERF1(1)
------>
NtERF2
<----
---------
ANAC58
<---------
LBD16
--------->
LBD16
------
-------->
ANAC55(2)
<---------
RAP2.3(3)
<---------
ATERF1(1)
---------->
DOF2
<--------
---------
ANAC46
<---------
ABI4(1)
--------->
LBD16
*
TSS
--------->
ARR11(3)
---------
ANAC55(2)
--------->
DEAR3(1)
<---------
LBD16
----------->
GT1
<---------
ARR11(3)
---------
ANAC58
<---------
DEAR3(1)
<-----------
GT1
<---------
ANAC46
<---------
GLK1(2)
--->
ATHB12
--------->
TOE2(3)
<---------
GLK1(1)
<---------
LBD16
<-----------
GT1
<---------
RVE1(1)
ttgcgtaccggaacctcat
cggcggcgtcgaagaaatctgtgattttttcccggcgactgtgacggtttcac
aagttaaaagtcgatttcagagattttt
27760900
<---------
ANAC46
----------->
HVH21
<---------
ANAC58
------->
HAHB4
<---------
ANAC58
---------
ICU4
<---------
SPL7
<-----------
GT1
--------
ATHB51
--------->
LBD16
--------->
AHL20(1)
--------->
ANAC58
------->
ICU4
<------
NtERF2
<---------
AHL20(1)
--------->
ANAC58
----->
YAB1
<---------
ICU4
<---------
ARR11(3)
<---------
YAB1
-----
AHL20(2)
----------->
HVH21
--------->
RAP2.6(2)
<---------
AHL20(2)
--------->
ANAC46
--->
AHL20(2)
<------------
CBF
--------->
ATHB12
--------->
ARR11(3)
<----------
DOF2
-
RVE1(1)
<------------
CBF
<---------
YAB1
<------
ZmHOX2a(2)
<---------
ICU4
--------->
LBD16
aataatgcgacggattgaattgggcctgaaactgatcatgggccggactaagagatcgaatattttttttcatttttgcttttattgacccacgaaaatt
27761000
<---------
ATHB12
--------->
MYB46(3)
------>
MYB46(1)
------>
MYB83
--------->
WOX13(1)
<------
NtERF2
------>
MYB83
<---------
DEAR3(2)
------>
MYB46(1)
<---------
RAP2.6(2)
-------->
P
<---------
DEAR3(1)
--------->
MYB55(1)
--------->
RAP2.6(3)
<---------
MYB46(2)
--------->
ARR14(2)
<---------
MYB111(1)
<-----------
HVH21
<---------
MYB59
----------->
RAV1(1)
<---------
ARR14(2)
--------->
MYB46(3)
--------->
LBD16
<---------
ICU4
<---------
MYB55(2)
----------------->
AG
<-----------
GT1
--------->
YAB1
<---------
MYB111(2)
------->
GAMYB
<---------
LBD16
<------
MYB83
<---------
At4g35610
<------
ZmHOX2a(1)
<---------
ICU4
----------------->
AGL1
<------
MYB46(1)
<---------
ATHB12
--------->
ZAT18
--------->
YAB1
--------->
ATHB12
--------->
ATERF1(1)
gtttggttttacatttaagctactaatcaacatcacaagagaggactacctaccaatcaacatcacaacagagacgattgcctaaaccgggtcggcctgg
27761100
--------->
ANAC46
--------->
ANAC58
<------
NtERF2
------>
NtERF2
<---------
RAP2.3(1)
<---------
RAP2.6(2)
<---------
ANAC46
<---------
RAP2.3(2)
<---------
DEAR3(1)
--------->
ATERF1(1)
--------->
ARR14(2)
--------->
MYB52(1)
<------
NtERF2
<-------
TEIL
<---------
ARR11(3)
------>
MYB46(1)
<---------
DEAR4(2)
--------->
LBD16
--------->
ARR11(3)
------>
MYB83
<---------
ATERF1(1)
<---------
PCF5
<------
NtERF2
<---------
MYB59
<---------
RAP2.3(1)
----------->
HVH21
<---------
DEAR3(2)
--------->
ANAC58
--------->
ALFIN1
<---------
LBD16
<------
ZmHOX2a(1)
--------->
ANAC46
<---------
DEAR3(1)
<---------
LBD16
<---------
ARR14(2)
--------->
ANAC58
<------
ZmHOX2a(1)
--------->
MYB52(1)
--------->
ATERF1(1)
--------->
MYB52(1)
<---------
ANAC46
--------->
ANAC58
<-----------
RAV1(2)
<----------
DOF2
--------->
MYB46(3)
actccaaggtcgtagaggaggcggctatacaagtaccgggaccggtacaggagccggttcaagaacttttggattaaacggaagcgaaccaaacagtttt
27761200
--------->
At4g35610
--------->
ZAT2
<---------
DEAR3(1)
<---------
RAP2.6(2)
<---------
At4g35610
--------->
GLK1(1)
--------->
ALFIN1
<---------
GLK1(1)
<
------->
PIF5
<---------
ARR14(2)
-
<-------
PIF5
--------->
ARR14(2)
<-
<---------
ANAC46
<---------
YAB1
<------
ZmHOX2a(1)
<--
<---------
ZAT18
--------->
ICU4
<------
ZmHOX2a(1)
---------
aagagtagaagaagtagtggacgtggagcggctggacatgatgatagcatcgttgaggagtactcgaggaactccatttcgatgtcttccttcgccgaag
27761300
---------->
DOF2
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
ANAC55(1)
<---------
AHL20(2)
--------->
ANAC55(2)
--------->
AHL20(2)
<---------
ANAC55(2)
<---------
AHL20(2)
------->
TEIL
<---------
ANAC58
<----------
DOF2
---------
At4g35610
<-----------
HVH21
--------->
AHL20(2)
<---------
ARR11(3)
-------->
At4g35610
--------->
MYB59
<---------
ANAC46
---------->
DOF2
--------->
AHL20(2)
------
TEIL
<------
ZmHOX2a(2)
<---------
ANAC58
<----------
ID1
--------->
ARR11(3)
------
P
<---------
ARR11(3)
<-----------
GT1
<---------
AHL20(2)
<------
ZmHOX2a(1)
>
DEAR3(1)
--------->
ARR11(3)
<---------
ICU4
<---------
AHL20(2)
===========================
gtagatgaatatgaagatcaaaacatgtaaggtcacccatatttacgtgtatatatatataaagagacaaagaagaggaccttttaaattatatgtttat
27761400
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AGI:
At1g73820.1
Description:
Ssu72-like family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO67337.1); contains InterPro domain Ssu72-like protein (InterPro:IPR006811)
Range:
from: 27759173
to: 27760872
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.