Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------YAB1                                                        -                            <---------ICU4                      --------->ARR11(3)                  <                        <---------YAB1                          <---------ARR11(3)                ---                     --------->GLK1(2)                         <---------At4g35610                <--                    --------->ARR14(2)                    <-------GAMYB                  --------->ZAT18                    <---------GLK1(2)                    <---------ANAC58                --------->ZAT14               ----------->RAV1(1)                       <---------ANAC58     <---------GLK1(2)   <--               --------->MYB52(1)                  <---------TOE2(3)        --------->ANAC58    ----- -------->TOE2(3)   <---------ARR14(2)             <---------TOE1(3)        --------->ANAC46  ------- ---ICU4      --------->AtMYB61            <-----------------AGL3<------ZmHOX2a(2)       <---------ZAT14 --YAB1      --------->MYB46(3)       --------->YAB1     <---------ANAC46   --------->ANAC58  <------   tgcctcaataccaaaaccaccagattctaattctgactaatcggaactaaattagggtttcgttgagatcaccaatgcaagaaactcaatgtacactgcg  27530000  --------->MYB52(1) -------->MYB46(3)                                              <------ZmHOX2a(2) ---------MYB52(2)                                            <------ZmHOX2a(1) ------>ARR14(2)                                              ==============================HOX2a_HOX2a ---------ARR10                  <-------GAMYB            <---------ANAC58 -------ARR14(2)          ----------->RAV1(2)             <---------ANAC58                      ----- ---->LBD16 --------->TOE2(3)   <---------MYB46(3)        <---------ANAC46                      <---- -->ZAT14   <----------DOF2     --------->MYB52(2)    <---------WOX13(1)             ================ ---LBD16   --------->TOE1(3) <---------MYB52(1)     --------->ARR14(2)              <------ZmHOX2a(2)   gaactaacgagaaactttaaaactgatcacctgtttgttgagactaaaatcaatggattggcgaggatcaaaactcttgaagtttggatcagaactcgaa  27530100                                                                                 --------->GLK1(2)                                                                          --------->ANAC58             ------>ZmHOX2a(2)                                            ------>ZmHOX2a(2)            <------ZmHOX2a(2)                                             --------->ANAC58           --------->ARR11(3)                                          ------->GAMYB           <---------ARR11(3)                                         --------->MYB46(3)      ==============HOX2a_HOX2a                                     --------->MYB52(1)      ----------->HVH21                    <-------TEIL           <---------SPL7<---------GLK1(2)      ------>ZmHOX2a(1)                   --------->CCA1(2)      --------->RAP2.3(2)                <      =============HOX2a_HOX2a           --------->ARR14(2)      --------->RAP2.6(2)         <------- ---->ARR14(2)                           <---------ARR14(2)    ------>NtERF2  --------->ANAC58      - -----ARR14(2)  <----------DOF2      <---------At4g35610       --------->LBD16--------->ANAC58  ----- ============HOX2a_HOX2a           <-----------RAV1(2) --------->REM1(1) <------ZmHOX2a(2)   --------   ttcgattcctgacgatctcttttccgattcaatcgcttcagaagatacaaaaaccctacaacttccgccgtaacgatcgcaagaatcccaagtagaattc  27530200                 --------->LBD16                              <---------WRKY45                <---------ANAC55(2)                           <---------WRKY12                --------->ANAC46                              <---------WRKY38(1)     ---------->DOF2               --------->HSFB2a(2)       <<<<<<<<<<WRKY11   --------->ANAC58                <---------HSFB2a(2)       <<<<<<<<<<WRKY6   --------->ANAC46                --------->LBD16           <<<<<<<<<<WRKY38   --------->ANAC58   --------->ANAC46                       <<<<<<<<<<WRKY43    <---------ANAC58 ---------ARR14(2)    --------->ANAC58                       <<<<<<<<<<WRKY26 <---------GLK1(1) --GLK1(1)  --------->ARR14(2)    <---------LBD16          <------MYB83       --------->GLK1(1) -------->ARR14(2)    --------->ANAC58                     <------MYB46(1)   --------->ARR11(3) ------------>AGL1  <---------DOF5.7(2)    --------->AtMYB61 --------->WRKY18(1) <---------ANAC58 ->GLK1(1)  <---------ARR14(2)   <---------LBD16       --------->ATHB12      <---------ARR11(3)   caaatacgaaagcgaaacccgtaaacgaaaccatctccgggaagaccacaagtctctcgattggtcaactagtggagaagatttcttacgaaggaatcaa  27530300                                                                                --------->YAB1                                                                              <---------WOX13(1)                    <---------ANAC46                                       <---------YAB1                 <-----------RAV1(1)                                       <---------AHL20(2)                 --------->ICU4                >>>>>>>>>TBF1           <---------AHL20(2)            --------->ANAC55(2)             >>>>>>>>>TBF1     <------ZmHOX2a(1)*TSS                 -            --------->ANAC46        <---------O2           <------ZmHOX2a(1)--------->ATHB12        -            <---------ANAC55(2)     <---------ANAC46 >>>>>>>>>TBF1    <---------AHL20(2)            -           >>>>>>>>>>AtSR1      <-----------HVH21 >>>>>>>>>TBF1       --------->AHL20(2)  -----------   taagagaagaaaacgcgtaatgttgtatagttcatgtcacttggaagaagaagaagaagaaggaggatgagattaatttgattgataaactttgcaattt  27530400                                 <---------AHL20(2)       <---------AHL20(2)      <---------YAB1       --------->AHL20(2)     <---------AHL20(1)       --------->AHL20(1)     <---------AHL20(2)                                               <-----      <---------ATHB51      <---------YAB1                                                  ---------      <---------AHL20(2)  --------->YAB1                                                   ----------      --------->AHL20(2)  --------->ATHB51                                          <---------MYB52(2)    ------>MYB46(1)       -------->ATHB1                                           <---------At4g35610    ------>MYB83          <--------HAHB4                                           --------->At4g35610  ------->GAMYB           <---------ICU4                                           --------->ZAT2 --------->MYB46(3)      <---------YAB1                            --------->At4g35610--------->MYB52(1) ----->MYB83  --------------->AGL15                              --------->YAB1    <---------ZAT2 ------->P    <---------------AGL15                             <---------YAB1<---------ARR14(2) ----->MYB46(1)    ---------->DOF2                           --------->ICU4   --------->ARR14(2) ->CBF<---------ATHB12   --------->ICU4              ---------->DOF2          --------->GLK1(2)------   ccaaccaaataatttgctcaaaaaagaattattattttttttttttttgaaaaacaaaagaccattatcagaagagagagtatccagctaacaaaaagcg  27530500                                                         ----------->GT1                                                         <------MYB46(1)                                                     <---------MYB46(3)                                                     --------->ATHB12                                                     --------->MYB55(2)                                         --------->YAB1  <------MYB83 -----ID1                                --------->TOE2(3)                ---------->DOF2 >DAG2                                   --------->TOE1(3)              <---------YAB1          <---- >DOF2                                 -------->P   <---------AtMYB61 --------->YAB1          ------- ----->GT1      --------->YAB1       --------->MYB46(3)<--------P--------->AHL20(2)  --------->TOE2(3)   aaaaattgactcagaaaatcataagaaaacatttgaaaaacaaccataaatgtagtggttggaaaaaaaaaatcataaaagtttatttcttaacatatta  27530600                                                            <---------AHL20(2)                                <---------AHL20(2)     <---------AHL20(2)                               <---------ARR11(3)      --------->AHL20(2)                       -----                               <---------AHL20(1)     --------->AHL20(2)                        <----                               --------->AHL20(1)     <---------AHL20(2)                     --------          <---------RVE1(1)    --------->ARR11(3) <---------YAB1                     <---------YAB1        <------ZmHOX2a(1)     <---------------AGL15--------->ATHB12      <---------AHL20(2)  <------- -----AHL20(2)         --------->ATHB12        <---------AHL20(2)    <---------AHL20(2)    <---------TOE2(3) -->AHL20(2)      <---------ZAT14         --------->ICU4   --------->AHL20(2)      --------->YAB1   <   atatgaaataggattttttgtttactgatttgatatatttagtattgattttatgattaaattttatgtttttattttaagtagatgataatttagattt  27530700                        --------->ARR11(3)                        <-----------ARR10            <---------ZAT18            --------->ZAT18            --------->REM1(2)         <---------ANAC58         <---------ANAC46         <---------ANAC58                                                          <-------MYC3  --------->ANAC55(2)   --------->GLK1(2)                                          ------->MYC3  <---------ANAC55(2)   <---------ARR11(3)                                      <---------ANAC46 ---->AHL20(2)          <---------ARR14(2)                                      <---------ANAC58  <-- -----AHL20(2)<---------ZAT14                                  --------->ARR11(3)  <-------MYC2   --- ->ARR11(3) <---------ZAT14         <-------TEIL               <---------ARR11(3)  ------->MYC2   <-- --ARR11(3) --------->ZAT14   --------->TOE2(3)            ---------->DOF2      <---------ANAC58<---- -----------GT1         --------->ARR14(2)         ---------->DOF2      --------->GLK1(2)<---------YAB1   tattacttattgtgtgtacacatgaaaatctacataaattcatttcaaatcgctaaagacataaagatttcaagaatccattgcatgtgtttttataggt  27530800                                                                                   <---------YAB1                                                                                 <---------ICU4                                                                                 --------->YAB1       <------MYB46(1)         --------->AHL20(1)                               --------->ICU4     --       <------MYB83            --------->ARR11(3)                             --------->YAB1       <-       ----------->GT1         <---------ARR11(3)      <-----------GT1       --------->AHL20(2) <---- ----MYB46(1)                  <---------AHL20(1) <---------AHL20(2)   <-----------GT1       <------- -------->GT1              --------->YAB1        --------->AHL20(2)<---------TOE2(3)      <---------WOX13(1) ----MYB83         <---------ICU4    <---------ANAC46 --------->AHL20(2) <---------YAB1  >>>>>>>>>ARR2 ----P--------->MYB59 --------->AHL20(2)        <---------AHL20(2) <---------TOE1(3)    --------->ATHB12   tggataatttggttaaactcaaaattatatcaaaatattgtgtattgtattttaaatttactacatgttaatgttaccattaattatgtttgattgttaa  27530900  Previous    Next  AGI:  At1g73200.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G17820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62030.1); contains InterPro domain Pleckstrin-like (InterPro:IPR001849) Range:  from: 27527115    to: 27530379    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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