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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
YAB1
-
<---------
ICU4
--------->
ARR11(3)
<
<---------
YAB1
<---------
ARR11(3)
---
--------->
GLK1(2)
<---------
At4g35610
<--
--------->
ARR14(2)
<-------
GAMYB
--------->
ZAT18
<---------
GLK1(2)
<---------
ANAC58
--------->
ZAT14
----------->
RAV1(1)
<---------
ANAC58
<---------
GLK1(2)
<--
--------->
MYB52(1)
<---------
TOE2(3)
--------->
ANAC58
-----
-------->
TOE2(3)
<---------
ARR14(2)
<---------
TOE1(3)
--------->
ANAC46
-------
---
ICU4
--------->
AtMYB61
<-----------------
AGL3
<------
ZmHOX2a(2)
<---------
ZAT14
--
YAB1
--------->
MYB46(3)
--------->
YAB1
<---------
ANAC46
--------->
ANAC58
<------
tgcctcaataccaaaaccaccagattctaattctgactaatcggaactaaattagggtttcgttgagatcaccaatgcaagaaactcaatgtacactgcg
27530000
--------->
MYB52(1)
-------->
MYB46(3)
<------
ZmHOX2a(2)
---------
MYB52(2)
<------
ZmHOX2a(1)
------>
ARR14(2)
==============================
HOX2a_HOX2a
---------
ARR10
<-------
GAMYB
<---------
ANAC58
-------
ARR14(2)
----------->
RAV1(2)
<---------
ANAC58
-----
---->
LBD16
--------->
TOE2(3)
<---------
MYB46(3)
<---------
ANAC46
<----
-->
ZAT14
<----------
DOF2
--------->
MYB52(2)
<---------
WOX13(1)
================
---
LBD16
--------->
TOE1(3)
<---------
MYB52(1)
--------->
ARR14(2)
<------
ZmHOX2a(2)
gaactaacgagaaactttaaaactgatcac
ctgtttgttgagactaaaatcaatggattggcgaggatcaaaactcttgaagtttggatcagaactcgaa
27530100
--------->
GLK1(2)
--------->
ANAC58
------>
ZmHOX2a(2)
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ANAC58
--------->
ARR11(3)
------->
GAMYB
<---------
ARR11(3)
--------->
MYB46(3)
==============
HOX2a_HOX2a
--------->
MYB52(1)
----------->
HVH21
<-------
TEIL
<---------
SPL7
<---------
GLK1(2)
------>
ZmHOX2a(1)
--------->
CCA1(2)
--------->
RAP2.3(2)
<
=============
HOX2a_HOX2a
--------->
ARR14(2)
--------->
RAP2.6(2)
<-------
---->
ARR14(2)
<---------
ARR14(2)
------>
NtERF2
--------->
ANAC58
-
-----
ARR14(2)
<----------
DOF2
<---------
At4g35610
--------->
LBD16
--------->
ANAC58
-----
============
HOX2a_HOX2a
<-----------
RAV1(2)
--------->
REM1(1)
<------
ZmHOX2a(2)
--------
ttcgattcctgacgatctcttttccgattcaatcgcttcagaagatacaaaaaccctacaacttccgccgtaacgatcgcaagaatcccaagtagaattc
27530200
--------->
LBD16
<---------
WRKY45
<---------
ANAC55(2)
<---------
WRKY12
--------->
ANAC46
<---------
WRKY38(1)
---------->
DOF2
--------->
HSFB2a(2)
<<<<<<<<<<
WRKY11
--------->
ANAC58
<---------
HSFB2a(2)
<<<<<<<<<<
WRKY6
--------->
ANAC46
--------->
LBD16
<<<<<<<<<<
WRKY38
--------->
ANAC58
--------->
ANAC46
<<<<<<<<<<
WRKY43
<---------
ANAC58
---------
ARR14(2)
--------->
ANAC58
<<<<<<<<<<
WRKY26
<---------
GLK1(1)
--
GLK1(1)
--------->
ARR14(2)
<---------
LBD16
<------
MYB83
--------->
GLK1(1)
-------->
ARR14(2)
--------->
ANAC58
<------
MYB46(1)
--------->
ARR11(3)
------------>
AGL1
<---------
DOF5.7(2)
--------->
AtMYB61
--------->
WRKY18(1)
<---------
ANAC58
->
GLK1(1)
<---------
ARR14(2)
<---------
LBD16
--------->
ATHB12
<---------
ARR11(3)
caaatacgaaagcgaaacccgtaaacgaaaccat
ctccgggaagaccacaagtctctcgattggtcaactagtggagaagatttcttacgaaggaatcaa
27530300
--------->
YAB1
<---------
WOX13(1)
<---------
ANAC46
<---------
YAB1
<-----------
RAV1(1)
<---------
AHL20(2)
--------->
ICU4
>>>>>>>>>
TBF1
<---------
AHL20(2)
--------->
ANAC55(2)
>>>>>>>>>
TBF1
<------
ZmHOX2a(1)
*
TSS
-
--------->
ANAC46
<---------
O2
<------
ZmHOX2a(1)
--------->
ATHB12
-
<---------
ANAC55(2)
<---------
ANAC46
>>>>>>>>>
TBF1
<---------
AHL20(2)
-
>>>>>>>>>>
AtSR1
<-----------
HVH21
>>>>>>>>>
TBF1
--------->
AHL20(2)
-----------
taagagaagaaaacgcgtaatgttgtatagttcatgtcacttggaagaagaagaagaagaaggaggatgagattaattt
gattgataaactttgcaattt
27530400
<---------
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(1)
<---------
AHL20(2)
<-----
<---------
ATHB51
<---------
YAB1
---------
<---------
AHL20(2)
--------->
YAB1
----------
--------->
AHL20(2)
--------->
ATHB51
<---------
MYB52(2)
------>
MYB46(1)
-------->
ATHB1
<---------
At4g35610
------>
MYB83
<--------
HAHB4
--------->
At4g35610
------->
GAMYB
<---------
ICU4
--------->
ZAT2
--------->
MYB46(3)
<---------
YAB1
--------->
At4g35610
--------->
MYB52(1)
----->
MYB83
--------------->
AGL15
--------->
YAB1
<---------
ZAT2
------->
P
<---------------
AGL15
<---------
YAB1
<---------
ARR14(2)
----->
MYB46(1)
---------->
DOF2
--------->
ICU4
--------->
ARR14(2)
->
CBF
<---------
ATHB12
--------->
ICU4
---------->
DOF2
--------->
GLK1(2)
------
ccaaccaaataatttgctcaaaaaagaattattattttttttttttttgaaaaacaaaagaccattatcagaagagagagtatccagctaacaaaaagcg
27530500
----------->
GT1
<------
MYB46(1)
<---------
MYB46(3)
--------->
ATHB12
--------->
MYB55(2)
--------->
YAB1
<------
MYB83
-----
ID1
--------->
TOE2(3)
---------->
DOF2
>
DAG2
--------->
TOE1(3)
<---------
YAB1
<----
>
DOF2
-------->
P
<---------
AtMYB61
--------->
YAB1
-------
----->
GT1
--------->
YAB1
--------->
MYB46(3)
<--------
P
--------->
AHL20(2)
--------->
TOE2(3)
aaaaattgactcagaaaatcataagaaaacatttgaaaaacaaccataaatgtagtggttggaaaaaaaaaatcataaaagtttatttcttaacatatta
27530600
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
ARR11(3)
--------->
AHL20(2)
-----
<---------
AHL20(1)
--------->
AHL20(2)
<----
--------->
AHL20(1)
<---------
AHL20(2)
--------
<---------
RVE1(1)
--------->
ARR11(3)
<---------
YAB1
<---------
YAB1
<------
ZmHOX2a(1)
<---------------
AGL15
--------->
ATHB12
<---------
AHL20(2)
<-------
-----
AHL20(2)
--------->
ATHB12
<---------
AHL20(2)
<---------
AHL20(2)
<---------
TOE2(3)
-->
AHL20(2)
<---------
ZAT14
--------->
ICU4
--------->
AHL20(2)
--------->
YAB1
<
atatgaaataggattttttgtttactgatttgatatatttagtattgattttatgattaaattttatgtttttattttaagtagatgataatttagattt
27530700
--------->
ARR11(3)
<-----------
ARR10
<---------
ZAT18
--------->
ZAT18
--------->
REM1(2)
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
<-------
MYC3
--------->
ANAC55(2)
--------->
GLK1(2)
------->
MYC3
<---------
ANAC55(2)
<---------
ARR11(3)
<---------
ANAC46
---->
AHL20(2)
<---------
ARR14(2)
<---------
ANAC58
<--
-----
AHL20(2)
<---------
ZAT14
--------->
ARR11(3)
<-------
MYC2
---
->
ARR11(3)
<---------
ZAT14
<-------
TEIL
<---------
ARR11(3)
------->
MYC2
<--
--
ARR11(3)
--------->
ZAT14
--------->
TOE2(3)
---------->
DOF2
<---------
ANAC58
<----
-----------
GT1
--------->
ARR14(2)
---------->
DOF2
--------->
GLK1(2)
<---------
YAB1
tattacttattgtgtgtacacatgaaaatctacataaattcatttcaaatcgctaaagacataaagatttcaagaatccattgcatgtgtttttataggt
27530800
<---------
YAB1
<---------
ICU4
--------->
YAB1
<------
MYB46(1)
--------->
AHL20(1)
--------->
ICU4
--
<------
MYB83
--------->
ARR11(3)
--------->
YAB1
<-
----------->
GT1
<---------
ARR11(3)
<-----------
GT1
--------->
AHL20(2)
<----
----
MYB46(1)
<---------
AHL20(1)
<---------
AHL20(2)
<-----------
GT1
<-------
-------->
GT1
--------->
YAB1
--------->
AHL20(2)
<---------
TOE2(3)
<---------
WOX13(1)
----
MYB83
<---------
ICU4
<---------
ANAC46
--------->
AHL20(2)
<---------
YAB1
>>>>>>>>>
ARR2
----
P
--------->
MYB59
--------->
AHL20(2)
<---------
AHL20(2)
<---------
TOE1(3)
--------->
ATHB12
tggataatttggttaaactcaaaattatatcaaaatattgtgtattgtattttaaatttactacatgttaatgttaccattaattatgtttgattgttaa
27530900
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AGI:
At1g73200.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G17820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62030.1); contains InterPro domain Pleckstrin-like (InterPro:IPR001849)
Range:
from: 27527115
to: 27530379
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.