Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            >>>>>>>>>>>>>>>>>LFY   -------->ATHB1   --------->YAB1   <------------ATHB5                                        <----------DOF2                 --------   <---------ICU4                  --------->ARR14(2)   <-----------GT1                     <--------  <---------ATHB12              --------->YAB1         <<<<<<<<<MYB98                       --------- -------->WOX13(1)           --------->YAB1       <---------AHL20(1)                 --------->ZAT6 -------YAB1                <---------YAB1    <---------AHL20(2)             <---------AHL20(2)  <--- --->ICU4--------->ANAC46 --------->YAB1     --------->AHL20(2)           ------->TEIL    <---------TOE2(3)   atcaatcattccctccattgttctgaatttataatcagatttacatatataatatatgttactctttagtcacatgtatatatatgaacactaagatata  26958400                                                                        ------>ZmHOX2a(2)                             <---------ZAT2                             =============================                             --------->ZAT2                            <------ZmHOX2a(2)              ------->TEIL<---------ANAC58                             ==============================           <---------ANAC58  <---------At4g35610  ================HOX2a_HOX2a           --------->ANAC55(2)         <---------ANAC58               --------->ARR14(2)           <---------ANAC55(2)         <---------ANAC58    <------ZmHOX2a(2)          --------->ZAT14           <---------ANAC58  --------->At4g35610  ============================HOX2a_HOX2a           -     --------->AHL20(2)   <---------ANAC58        =============================HOX2a_HOX2a     <----- ->CCA1(2) --------->ANAC46<---------ZAT18   <----------CDC5  --------->ANAC46        <---------ZAT14 -ARR11(3)--------------->AtSPL3     <---------ARR11(3)   <---------ARR11(3)  <-----------HVH21<----- >ARR11(3)--------------->AtSPL8     --------->ARR11(3)   --------->ARR11(3)<------NtERF2      ------ ------AHL20(2)   <----------DOF2---------->DOF2  <------ZmHOX2a(1)   <---------ARR14(2)<---------ZAT14   tatatgatataatacgtaccctttagtagcgagctcaaagagcttgccctgaggagagaagatcacaacaccgatctcggcatcacagagcacagagagc  26958500                                                           --------->ARR14(2)                                                      ------->TEIL                                           --------->ANAC55(2)                              ---------                                           --------->O2  --------->LBD16                    ---------                                           <---------ANAC55(2)                              --------- ======HOX2a_HOX2a                   --------->DAG2 <---------ZAT14                        ------->PIF5 ======HOX2a_HOX2a                  ---------->DOF2 --------->ZAT14                        <-------PIF5 ----->ZmHOX2a(1)                   =================bZIP_DOF                    ------->TEIL ----GLK1(1)                ------>ZmHOX2a(1)      ----------->HVH21        --------->At4g35610 ----At4g35610        --------->ARR14(2)   <---------O2<---------LBD16------>ZmHOX2a(1)   --------->ANAC46 --->GLK1(1)          <---------ARR14(2)   <---------TGA1a <---------GLK1(2)<---------At4g35610  <---   tccttagccttcttgagaagaccagttctcctcttgcaaaaagtcacttgtctgtgaaccgggttctcaatcctcttaagctgaatctttccacgagcca  26958600                                    <---------ANAC58      --------->YAB1                <---------ANAC58                       <---------ANAC58         -     <---------ATHB12               <---------ANAC46                       <---------ANAC46         -   --------->WOX13(1)              <---------TOE2(3)         --------->ARR14(2)          ----------->GT1 >ANAC58             <---------CCA1(2)                       <---------ARR14(2)          <---------ANAC55(2) >ANAC46    --------->KAN4(2)    ----------->HVH21     <---------ZAT6      <---------ANAC58        -- >ANAC58 <---------GLK1(2)  <---------YAB1      <---------ANAC46 <------MYB46(1)        <------------ ------CCA1(2)<-----------GT1--------->ATHB12  <---------TOE2(3) <------MYB83  ---------->DOF2    ---   tctctcaatcagaatatttccttctatctgatgatttgacgtttgggtttacgtttagagttggatttggttttatgacttgaaagttgaaacgtgaaac  26958700    --------->ZAT6  ------>MYB46(1)                                                                             -------  ------>MYB83                             <----------DOF2                               *TSS ------- ------>GAMYB                        --------->ZAT14                                    ------>MYB46(1) -------->AtMYB61                  --------->ANAC46                                     ------>MYB83 ------->MYB46(3)                <---------ALFIN1                                      --------->WOX13(1) -----------TaNAC69(2)      <---------ARR14(2)                                     <-----------GT1--- ----->P                    --------->ARR14(2)               <---------LBD16 ----------->GT1  -------   aacctcccactagtttgaactagcttcgaggttccccacttaactctttggtttctctgtttcttcggagacaactgtgaagttattaccaatctcatgc  26958800                                                                           --------->bZIP60(2)                                 <---------GLK1(2)                  <---------DAG2         <----------DOF2         <---------ARR14(2)                 <----------DOF2       ---------->ID1            --------->ARR14(2)    <---------------AGL15 -->ANAC58       <---------AHL20(2)                    --------------->AGL15 -->ANAC46   <-----------TBP  --------->YAB1    --------->ZAT14    <---------DAG2 --->NtERF2<-----------TBP --------->YAB1 <---------MYB52(2)---------->DOF2--------->ANAC46 -->ANAC58 --------->AHL20(2)<---------YAB1     <---------ZAT14  ------->TEIL            <-----------GT1   caccttcttgtctttatatataatctccattatcatattctcccactaacttcactgcttcttaaagcaccttttccacatcagcctcattttcccttat  26958900                 --------->TOE2(3)                                  --------->HSFB2a(1)   <---------AHL20(2)                --------->ANAC46                                  ---------->DOF2        --------->YAB1                --------->ANAC55(2)           ----------->GT1 --------->AtLEC2          <---------YAB1             <---------ARR14(2)       --------->YAB1         --------->TOE2(2)       <---------YAB1             --------->ARR14(2)      <-------TEIL            --------->TOE1(2)   <----------DOF2   ------->TEIL<-------TEIL <---------ANAC55(2)         <----------DOF2      <----------DOF2   atatgtatgcgctcatatacgttatatgttaagtatgcattcatacaatagtatatagctttacatgcgaaagctccgtctttctttgttattataaggg  26959000                                                                                             <-------                                                                                            ---------                                                            <---------WOX13(1)  <---------bZIP60(1)                            <---------ANAC58              --------->ATHB12      <---------TGA1a <<<<<                            <---------ANAC58             <---------YAB1    <---------At4g35610-------                            <---------ANAC46         =====================================bZIP_DOF --                           --------->STY1(2)  <---------TOE1(2)    <---------TOE2(3)     ----------->HVH21                    ------>ZmHOX2a(1)<---------YAB1  <----------DOF2     --------->REM1(1)  ---------       <-----------GT1 ------>ZmHOX2a(1)      <---------TOE2(2) <---------WOX13(1)----------->HVH21--    --------------->AtSPL8 <---------STY1(2) ------>ZmHOX2a(1)--------->ATHB12  --------->bZIP60(1)--   gtttgtattgtactatcccttcctcctctagcttgtagtataatttcctaggtttctttttgattgattgatgttacatctgatgtgacatatgacctga  26959100                              <-----------GT1                        <---------AHL20(2)                        --------->ARR11(3) --MYB59  <-----------GT1<---------AHL20(2) -->RAV1(2)             <---------ARR11(3)          <-----------GT1 <<GRF7----------->GT1  <---------AHL20(1) <------MYB83 ---->HVH21             --------->AHL20(2) ----------->GT1                <---------RAP2.6(2) ------->ANAC58         --------->AHL20(1) <------MYB46(1)   --------->REM1(1)   --------->ARR14(2) >At4g35610            --------->AHL20(2) <---------------AtSPL8       --------->ALFIN1 ------->ANAC58   ----------------->AGL3  --------------->AtSPL8     --------->CCA1(2)       <------- ------->AtLEC2 <---------ARR11(3)        --------->MYB59    --------->ANAC46    <---------ARR14(2)   catgcactattgttacaatatccaaatatatttaacaatctaatttggtacaatttacattctacaccaagagatggaggctggatttgatatgtgcaag  26959200                                                                                                   --                                                --------->TOE2(3)                                <---       <---------AHL20(2)                    <----------DOF2                                     <---   --------->AHL20(2)            <---------ANAC58                                             <------   <---------AHL20(2)<---------GLK1(1)    <-----------GT1       <----------DOF2      ---------->DOF2 --AtLEC2   ---------->DOF2      <---------ANAC58      ---------->DOF2<---------AHL20(2) ----------->GT1   actatatatataaaaaaagattgagttcccaaatggcatgcgattcactttcttaaaaaaagaattctttgttttattttttataaacaaagcgttatta  26959300  Previous    Next  AGI:  At1g71692.1    Description:  AGL12 (AGAMOUS-LIKE 12); transcription factor. Identical to Agamous-like MADS-box protein AGL12 (AGL12) [Arabidopsis Thaliana] (GB:Q38841;GB:Q9SF79); similar to MADS-box protein (AGL79) [Arabidopsis thaliana] (TAIR:AT3G30260.1); similar to TAGL12 transcription factor [Lycopersicon esculentum] (GB:AAM33103.2); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) Range:  from: 26956307    to: 26958789    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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