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Chromosome 1
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Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
>>>>>>>>>>>>>>>>>
LFY
-------->
ATHB1
--------->
YAB1
<------------
ATHB5
<----------
DOF2
--------
<---------
ICU4
--------->
ARR14(2)
<-----------
GT1
<--------
<---------
ATHB12
--------->
YAB1
<<<<<<<<<
MYB98
---------
-------->
WOX13(1)
--------->
YAB1
<---------
AHL20(1)
--------->
ZAT6
-------
YAB1
<---------
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
<---
--->
ICU4
--------->
ANAC46
--------->
YAB1
--------->
AHL20(2)
------->
TEIL
<---------
TOE2(3)
atcaatcattccctccattgtt
ctgaatttataatcagatttacatatataatatatgttactctttagtcacatgtatatatatgaacactaagatata
26958400
------>
ZmHOX2a(2)
<---------
ZAT2
=============================
--------->
ZAT2
<------
ZmHOX2a(2)
------->
TEIL
<---------
ANAC58
==============================
<---------
ANAC58
<---------
At4g35610
================
HOX2a_HOX2a
--------->
ANAC55(2)
<---------
ANAC58
--------->
ARR14(2)
<---------
ANAC55(2)
<---------
ANAC58
<------
ZmHOX2a(2)
--------->
ZAT14
<---------
ANAC58
--------->
At4g35610
============================
HOX2a_HOX2a
-
--------->
AHL20(2)
<---------
ANAC58
=============================
HOX2a_HOX2a
<-----
->
CCA1(2)
--------->
ANAC46
<---------
ZAT18
<----------
CDC5
--------->
ANAC46
<---------
ZAT14
-
ARR11(3)
--------------->
AtSPL3
<---------
ARR11(3)
<---------
ARR11(3)
<-----------
HVH21
<-----
>
ARR11(3)
--------------->
AtSPL8
--------->
ARR11(3)
--------->
ARR11(3)
<------
NtERF2
------
------
AHL20(2)
<----------
DOF2
---------->
DOF2
<------
ZmHOX2a(1)
<---------
ARR14(2)
<---------
ZAT14
tatatgatataatacgtac
cctttagtagcgagctcaaagagcttgccctgaggagagaagatcacaacaccgatctcggcatcacagagcacagagagc
26958500
--------->
ARR14(2)
------->
TEIL
--------->
ANAC55(2)
---------
--------->
O2
--------->
LBD16
---------
<---------
ANAC55(2)
---------
======
HOX2a_HOX2a
--------->
DAG2
<---------
ZAT14
------->
PIF5
======
HOX2a_HOX2a
---------->
DOF2
--------->
ZAT14
<-------
PIF5
----->
ZmHOX2a(1)
=================
bZIP_DOF
------->
TEIL
----
GLK1(1)
------>
ZmHOX2a(1)
----------->
HVH21
--------->
At4g35610
----
At4g35610
--------->
ARR14(2)
<---------
O2
<---------
LBD16
------>
ZmHOX2a(1)
--------->
ANAC46
--->
GLK1(1)
<---------
ARR14(2)
<---------
TGA1a
<---------
GLK1(2)
<---------
At4g35610
<---
tccttagccttcttgagaagaccagttctcctcttgcaaaaagtcacttgtctgtgaaccgggttctcaatcctcttaagctgaatctttccacgagcca
26958600
<---------
ANAC58
--------->
YAB1
<---------
ANAC58
<---------
ANAC58
-
<---------
ATHB12
<---------
ANAC46
<---------
ANAC46
-
--------->
WOX13(1)
<---------
TOE2(3)
--------->
ARR14(2)
----------->
GT1
>
ANAC58
<---------
CCA1(2)
<---------
ARR14(2)
<---------
ANAC55(2)
>
ANAC46
--------->
KAN4(2)
----------->
HVH21
<---------
ZAT6
<---------
ANAC58
--
>
ANAC58
<---------
GLK1(2)
<---------
YAB1
<---------
ANAC46
<------
MYB46(1)
<------------
------
CCA1(2)
<-----------
GT1
--------->
ATHB12
<---------
TOE2(3)
<------
MYB83
---------->
DOF2
---
t
ctctcaatcagaatatttccttctatctgatgatttgacgtttgggtttacgtttagagttggatttggttttatgacttgaaagttgaaacgtgaaac
26958700
--------->
ZAT6
------>
MYB46(1)
-------
------>
MYB83
<----------
DOF2
*
TSS
-------
------>
GAMYB
--------->
ZAT14
------>
MYB46(1)
-------->
AtMYB61
--------->
ANAC46
------>
MYB83
------->
MYB46(3)
<---------
ALFIN1
--------->
WOX13(1)
-----------
TaNAC69(2)
<---------
ARR14(2)
<-----------
GT1
---
----->
P
--------->
ARR14(2)
<---------
LBD16
----------->
GT1
-------
aacctcccactagtttgaactagcttcgaggttccccacttaactctttggtttctctgtttcttcggagacaactgtgaagttattac
caatctcatgc
26958800
--------->
bZIP60(2)
<---------
GLK1(2)
<---------
DAG2
<----------
DOF2
<---------
ARR14(2)
<----------
DOF2
---------->
ID1
--------->
ARR14(2)
<---------------
AGL15
-->
ANAC58
<---------
AHL20(2)
--------------->
AGL15
-->
ANAC46
<-----------
TBP
--------->
YAB1
--------->
ZAT14
<---------
DAG2
--->
NtERF2
<-----------
TBP
--------->
YAB1
<---------
MYB52(2)
---------->
DOF2
--------->
ANAC46
-->
ANAC58
--------->
AHL20(2)
<---------
YAB1
<---------
ZAT14
------->
TEIL
<-----------
GT1
caccttcttgtctttatatataatctccattatcatattctcccactaacttcactgcttcttaaagcaccttttccacatcagcctcattttcccttat
26958900
--------->
TOE2(3)
--------->
HSFB2a(1)
<---------
AHL20(2)
--------->
ANAC46
---------->
DOF2
--------->
YAB1
--------->
ANAC55(2)
----------->
GT1
--------->
AtLEC2
<---------
YAB1
<---------
ARR14(2)
--------->
YAB1
--------->
TOE2(2)
<---------
YAB1
--------->
ARR14(2)
<-------
TEIL
--------->
TOE1(2)
<----------
DOF2
------->
TEIL
<-------
TEIL
<---------
ANAC55(2)
<----------
DOF2
<----------
DOF2
atatgtatgcgctcatatacgttatatgttaagtatgcattcatacaatagtatatagctttacatgcgaaagctccgtctttctttgttattataaggg
26959000
<-------
---------
<---------
WOX13(1)
<---------
bZIP60(1)
<---------
ANAC58
--------->
ATHB12
<---------
TGA1a
<<<<<
<---------
ANAC58
<---------
YAB1
<---------
At4g35610
-------
<---------
ANAC46
=====================================
bZIP_DOF
--
--------->
STY1(2)
<---------
TOE1(2)
<---------
TOE2(3)
----------->
HVH21
------>
ZmHOX2a(1)
<---------
YAB1
<----------
DOF2
--------->
REM1(1)
---------
<-----------
GT1
------>
ZmHOX2a(1)
<---------
TOE2(2)
<---------
WOX13(1)
----------->
HVH21
--
--------------->
AtSPL8
<---------
STY1(2)
------>
ZmHOX2a(1)
--------->
ATHB12
--------->
bZIP60(1)
--
gtttgtattgtactatcccttcctcctctagcttgtagtataatttcctaggtttctttttgattgattgatgttacatctgatgtgacatatgacctga
26959100
<-----------
GT1
<---------
AHL20(2)
--------->
ARR11(3)
--
MYB59
<-----------
GT1
<---------
AHL20(2)
-->
RAV1(2)
<---------
ARR11(3)
<-----------
GT1
<<
GRF7
----------->
GT1
<---------
AHL20(1)
<------
MYB83
---->
HVH21
--------->
AHL20(2)
----------->
GT1
<---------
RAP2.6(2)
------->
ANAC58
--------->
AHL20(1)
<------
MYB46(1)
--------->
REM1(1)
--------->
ARR14(2)
>
At4g35610
--------->
AHL20(2)
<---------------
AtSPL8
--------->
ALFIN1
------->
ANAC58
----------------->
AGL3
--------------->
AtSPL8
--------->
CCA1(2)
<-------
------->
AtLEC2
<---------
ARR11(3)
--------->
MYB59
--------->
ANAC46
<---------
ARR14(2)
catgcactattgttacaatatccaaatatatttaacaatctaatttggtacaatttacattctacaccaagagatggaggctggatttgatatgtgcaag
26959200
--
--------->
TOE2(3)
<---
<---------
AHL20(2)
<----------
DOF2
<---
--------->
AHL20(2)
<---------
ANAC58
<------
<---------
AHL20(2)
<---------
GLK1(1)
<-----------
GT1
<----------
DOF2
---------->
DOF2
--
AtLEC2
---------->
DOF2
<---------
ANAC58
---------->
DOF2
<---------
AHL20(2)
----------->
GT1
actatatatataaaaaaagattgagttcccaaatggcatgcgattcactttcttaaaaaaagaattctttgttttattttttataaacaaagcgttatta
26959300
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AGI:
At1g71692.1
Description:
AGL12 (AGAMOUS-LIKE 12); transcription factor. Identical to Agamous-like MADS-box protein AGL12 (AGL12) [Arabidopsis Thaliana] (GB:Q38841;GB:Q9SF79); similar to MADS-box protein (AGL79) [Arabidopsis thaliana] (TAIR:AT3G30260.1); similar to TAGL12 transcription factor [Lycopersicon esculentum] (GB:AAM33103.2); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487)
Range:
from: 26956307
to: 26958789
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.