Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->ANAC55(2)                      <---------ANAC55(2)                      --------->ANAC58                 --------->ANAC58                 --------->ANAC55(2)                 <---------ANAC55(2)                 --------->ANAC58                 --------->ANAC55(1)                                  --------->CCA1(2)                 --------->ANAC46                                    --------->ARR11(3)              <---------REM1(2)    <----------DOF2                   --------->ARR14(2)       --------->CCA1(2)       <---------ZAT18                       <---------ARR11(3)      --------->ARR11(3)      ----------->HVH21                      <---------ARR14(2)      <---------ARR11(3) --------->MYB52(1)                          --------->ARR11(1)    ----------->ARR10 --------->ANAC58       <---------GLK1(2)   ---------->DOF2--------->YAB1 <----- ---------At4g35610 --------->MYB52(1) <---------YAB1   ---------->DOF2    ------->TEIL     <--------   ttagatgagatatgtatacacgtaacgtaacagtgacctttgttatagaattttaaacaaaagaaatcaaagatatggaccgtcataatatccaatggtg  26817900                                             <---------HSFB2a(2)                                             --------->HSFB2a(2)                                           --------->MYB52(1)                                   --------->LBD16                          ------->TEIL                                  <---------ANAC46              <---------ANAC46                                  <---------AtLEC2              <---------ANAC58      -------->HAHB4                                  <---------ANAC58              <---------ANAC58     <---------YAB1                              --------->KAN4(1)               --------->ARR11(3)  <---------AHL20(2)                              <----------TaMYB80              <---------AHL20(2)  --------->AHL20(2)                             ---------->TaMYB80        ----------->GT1      --------->GLK1(2) ----ANAC46      --------->CCA1(2)<---------ANAC58    <-------MYC3         <---------CCA1(2) -ATHB12 <----------DOF2     <---------KAN4(2)        ------->MYC3     ----------->GT1--------->YAB1-   gagaaaggctgctttagagagatgcgattggaatatgcgtggaacttacagaaaaacgtgttaatttcttggaatgtgaatcttttaattatagtttcag  26818000                                            <---------AHL20(2)                                          <----------DOF2                                      ------>ZmHOX2a(2)                                     --------->ARR14(1)                                     --------->CCA1(2)                                    --------->AGP1                                    --------->ARR11(3)                                    --------->ARR14(2)                                      ---------                                    <---------ARR14(2)                                      <--------          <---------ICU4            <---------ARR11(3)                                    --------->ARR11(3)         <---------ATHB12       --------->YAB1       --------->ICU4                     --------->ICU4  ----------->GT1             --------->GLK1(2)<---------TOE2(3)                   ----------->GT1 --------->DOF2      <---------ANAC46<------ZmHOX2a(2)--------->ATHB12          <---------STY1(2)   agaaaagataaatcattttggcttcgttgaagaatcaagatccgattttatggaaatgagtgaatggaagtaagtttttgctagatagtaaaaatcatgc  26818100                                                                    --------->AHL20(2)                                                                   <---------AHL20(1)                                                                   <---------AHL20(2)                                                             ----------->GT1                              <---------ANAC58               <------MYB46(1)                              <---------ANAC46               <------MYB83                              <---------ANAC58           --------->ATHB12                              <---------bZIP60(2)       ------>ZmHOX2a(1)        <---------AHL20(2)                              <---------AtLEC2        <---------At4g35610        --------->AHL20(2)                         <---------O2        =====================RAV   <---------AHL20(2)                    <---------ARR14(2)       <---------YAB1<---------WOX13(1)   --------->AHL20(2)                    --------->ARR14(2)       <-----------RAV1(1)   --------->AHL20(1)<-------TEIL >YAB1             <---------CCA1(2)   <---------YAB1 ----------->RAV1(2) <---------TOE2(3)       <-- -ICU4<-----------GT1    --------->O2<---------At4g35610<---------YAB1 --------->AHL20(2)  <---------   ctctcttctcaccatttagtcatatccaagtggcatggcctctgattatgttgggctcctgattggtaaaatatttaatgtattaaattcatatttcaat  26818200                                   ------->TEIL                                   <---------ARR11(1)                                   <---------ARR14(2)                                   --------->ARR14(2)                                  <---------CCA1(2)                                  <---------ARR14(1)                                 --------->LBD16                                <---------ANAC55(2)                                <---------ANAC58                                <---------ANAC58                                --------->ANAC55(2)                <---------------AGL15     <---------AHL20(2)                                     ----                ===============================================================================MADS_MADS          <---------ICU4       <---------LBD16                                                   <---     --------->ARR11(3)      <-----------GT1                                                  *TSS     <---------ARR11(3)    --------->HSFC1(2)                                  <---------------AGL15    --------->YAB1         <---------HSFB2a(1)          <---------DAG2         --------------->AGL15 ---------->DOF2--------------->AGL15    --------->AHL20(2)   <---------AHL20(2)    ---------->DOF2 -------ANAC55(2)          <---------HSFC1(2)           --------->TOE2(3)<-----------GT1    <-------- --GT1  --------->GLK1(2)  --------->HSFB2a(1)     <---------MYB59     <----------DOF2     ----------   acttaaagataatcttttcaaaattcagaaatttccgtatctataaaatttagcctaacctttttaaaatggtctttacttctctaaaaagaaccgtcaa  26818300                                                                                 --------->SPL7   --------->ARR14(2)                                 <---------ZAT18         <---------ANAC58   <---------ARR14(2)                          --------->ARR11(3)             <---------ANAC46 ----->ARR14(2)                                <---------ARR14(2)             <---------ANAC58 ------ARR14(2)                                --------->ARR14(2)    --------->ANAC58               - ---HVH21--------->GLK1(2)                     <---------GLK1(2)     --------->ANAC58    --------->ARR14(2) ->GT1<---------YAB1      <----------DOF2----------->HVH21         ---------->DOF2       <---------ARR14(2)   atacgaatacgattctaagttttttagtctttatagtcagtctctcacagattttgtgcattcaaatcacaaagcaagtcgcgtacaatgggttctgcat  26818400                                                --------->RAP2.6(2)                                                <---------ATERF1(2)                                                --------->ANAC58                                                --------->ANAC58                                                --------->ANAC46                                                --------->RAP2.3(2)                                                --------->RAP2.3(3)                                                --------->RRTF1(2)                                                --------->DEAR3(1)                                               --------->RAP2.3(1)                                               --------->RRTF1(1)                                               <------NtERF2                                               --------->ERF1                                               --------->ATERF1(1)                                               --------->RAP2.6(1)                                     <---------WRKY38(1)                                     <---------WRKY12                                    <---------MYB52(1)                                    --------->DOF5.7(2)                                    <------NtERF2                                   ------>NtERF2--------->RRTF1(3)                                   <-----------HVH21                                  --------->DEAR3(1)                                  --------->RAP2.6(2)                                  --------->RAP2.3(3)                                  --------->ATERF1(2)                                  --------->RRTF1(2)                                  <---------ATERF1(2)                                  --------->RAP2.3(2)                                  --------->RRTF1(3)                                 <------NtERF2<---------RRTF1(1)                                 --------->ATERF1(1)                                 --------->RAP2.3(1)                                 --------->ERF1--------->DEAR4(2)                                 --------->RRTF1(1)                                ------>NtERF2 --------->ABI4(2)                                --------->ABI4(1)                                <---------ATERF1(1)                               <---------DEAR3(1)                               --------->RAP2.3(2)                               --------->ANAC46--------->ORA47(2)                               --------->DEAR3(1)  <---------ALFIN1                               --------->RAP2.3(3)<------NtERF2                               --------->RRTF1(3)--------->ABI4(1)                              --------->RAP2.3(1)------>NtERF2                              --------->ERF1  <---------DEAR4(2)                          ------>ZmHOX2a(2)   <---------ATERF1(1)                         <---------GLK1(1)    <---------RAP2.3(1)                         --------->GLK1(1)    <---------ORA47(2)                        <-----------ARR10     <---------ERF1                        --------->GLK1(2)     <---------RAP2.6(1)                        --------->ARR14(3)    ------>NtERF2                        <---------ARR14(2)   <---------DEAR3(1)                        <---------AGP1       --------->ANAC46                        <---------ARR14(3)   <---------RAP2.3(2)                        <---------ARR11(3)   --------->DEAR3(1)                  --------->ANAC58                        --------->ARR11(3)  --------->RAP2.3(1)   --------->ANAC58                        --------->ARR14(2)  --------->ATERF1(1)   --------->ANAC55(1)            --------->ANAC58  --------->ATERF1(1)<---------ATERF1(1)             --------->ANAC58            --------->ANAC58 <---------ATERF1(1)--------->ATERF1(2)        <---------ARR11(3)           <---------At5g28300--------->DEAR4(2)--------->DREB2C(2)        --------->ARR11(3)        <-----------HVH21<------ZmHOX2a(2)  <------NtERF2         --------->ANAC58                --- <------ZmHOX2a(2)     <------ZmHOX2a(1)   <---------ATERF1(1)    --------->ANAC55(2)       ------>NtERF2 =============================HOX2a_HOX2a <---------DEAR3(1)      <---------ANAC55(2)       <-------- -------->ARR14(2)   <---------TOE2(3)    ---------->CDC5         --------->ANAC46         --------->DEAR3(1)   tcgatccccttgtcacggccactgaggatctcgccgccgtcaactcggcgccgccactctcaaacctcacgcaagaagaactcaagaaaatcgccgctta  26818500                                                                       <---------ANAC58                                                                       <---------ANAC46                                                                  <---------ANAC46                                                                  <---------bZIP60(2)                                                                  <---------ANAC58                                                                  --------->DEAR3(1)                                                                  <---------O2                                                               --------->ANAC46                                                               --------->ANAC58             <--------                                                             <---------ALFIN1        <---------GLK1(2)                  ------->TEIL                          --------->ANAC46    --------->ARR14(2)         <---------ARR14(2)                        <---------ALFIN1 --------->ALFIN1<---------At4g35610         --------->ARR14(2)                       <---------ABI4(2)--------->LBD16  <---------ZAT2     <------NtERF2--------->GLK1(2)             <---------TCP16(1)<---------ANAC58<---------ZAT18   --------->DEAR3(1)              <-----------HVH21   --------->LBD16 <---------ANAC58     --------- ------->DOF2     <---------ARR14(2)            <---------TCP20--------->ANAC58 --------->At4g35610 -At4g35610       --------->ARR14(2)     <------NtERF2--------->DEAR3(1)   <---------CCA1(2)---------   taaagccgtcgaattcgtcgaatctggaatggttatcggtctcggcactggctccaccgcgaaacacgccgtggctcgtatcagcgagcttctccgagaa  26818600                                                                                                  ---                                                                                                  <--                                                                                                <----                                                                                               ------                                                                                           --------->ARR14(2)                                                                                           <---------ARR14(2)                                                                                       <-------TEIL                                                                                      --------->ARR14(1)                                                                                      --------->CCA1(2)                                                                                     <---------ARR14(2)                                                                                     <---------GLK1(2)                                                                                     --------->ARR11(1)                     <---------GLK1(1)                                               --------->ARR14(2)                     --------->GLK1(1)  --------->ANAC58                           ----------->ARR10                    <---------GLK1(2)   --------->ANAC58                        <------ZmHOX2a(2)<---                 --------->YAB1    --------->AtMYB61                           <---------ARR14(2)<--- -HSFB2a(2)  <---------AHL20(2)    --------->TOE2(3)                           --------->ARR14(2)---- >HSFB2a(2)  <---------YAB1        ------->GAMYB                 <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3) >LBD16    --------->CCA1(2)      --------->MYB46(3)   --------->ALFIN1        --------->AGP1<-------   ggaaaactcaaggatataatcggaatccctacttcaaccacaacgcatgagcaagcggtgtctctagggataccattatccgatctagattcgcatccgg  26818700                                                                       <---------YAB1                       ------>NtERF2                                   <---------MYB52(1)                      --------->At1g77200                             <-------GAMYB                      --------->DREB2C(2)                            ------>ZmHOX2a(2)                      ----------->HVH21                              ================================                      --------->DEAR3(1)                            =================================                      --------->RAP2.3(2)                          --------->ARR14(2)                     --------->ORA47(2)                            <---------ARR14(2)                     --------->RRTF1(1)                           <------NtERF2                     <------NtERF2 <---------LBD16               <---------DEAR3(2)                     --------->RAP2.6(1)                         <---------MYB46(3)      --------->WOX13(1)<------NtERF2                           <---------DEAR3(1)     ------>ZmHOX2a(2)--------->RAP2.3(3)                       <---------ANAC46   <---------AGP1   ------>NtERF2 ==============================HOX2a_HOX2a   <---------ARR14(2)--------->RAP2.3(1)                       ------>NtERF2   --------->ARR14(2)--------->DEAR3(2)                        <------NtERF2   <---------ARR11(3)--------->ERF1=============================HOX2a_HOX2a   --------->ARR11(3)--------->ATERF1(1)                       <---------LBD16 <---------MYB46(3) <---------ATERF1(1)                       <---------ATERF1(1) ------>MYB55(2)    <---------RAP2.3(1)                      <---------DEAR3(1) -------MYB46(3)   <---------ANAC46------>ZmHOX2a(2)        <---------LBD16 -----MYB52(1)     <---------DEAR3(1)                       --------->ATERF1(1) --->LBD16  <---------ATHB12     --------->ARR14(2)        <---------bZIP60(2)                      - ------DEAR3(1)   --------->ATERF1(1)                    ==================HOX2a_HOX2a          <---- ------AtMYB61   <---------ATERF1(1) --------->LBD16     <------ZmHOX2a(1)                <---------WOX13(1) ----->ALFIN1   <---------DEAR3(1)<------ZmHOX2a(2)      ===================HOX2a_HOX2a --------->ATHB12 --LBD16  --------->WOX13(1)     <---------ARR14(2)  ---------->DOF2<------ZmHOX2a(2)  <---------YAB1   tggtggatctatcaatcgatggcgccgacgaagtcgatccggctcttaatctggtgaaaggacgcggcggatcgttattgagagagaagatgattgaagg  26818800  Previous    Next  AGI:  At1g71100.1    Description:  RSW10 (RADIAL SWELLING 10); ribose-5-phosphate isomerase. similar to ribose-5-phosphate isomerase [Arabidopsis thaliana] (TAIR:AT2G01290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42241.1); contains InterPro domain Ribose 5-phosphate isomerase; (InterPro:IPR004788) Range:  from: 26818294    to: 26819333    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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