Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
--------->
ANAC55(2)
<---------
ANAC55(2)
--------->
ANAC58
--------->
ANAC58
--------->
ANAC55(2)
<---------
ANAC55(2)
--------->
ANAC58
--------->
ANAC55(1)
--------->
CCA1(2)
--------->
ANAC46
--------->
ARR11(3)
<---------
REM1(2)
<----------
DOF2
--------->
ARR14(2)
--------->
CCA1(2)
<---------
ZAT18
<---------
ARR11(3)
--------->
ARR11(3)
----------->
HVH21
<---------
ARR14(2)
<---------
ARR11(3)
--------->
MYB52(1)
--------->
ARR11(1)
----------->
ARR10
--------->
ANAC58
<---------
GLK1(2)
---------->
DOF2
--------->
YAB1
<-----
---------
At4g35610
--------->
MYB52(1)
<---------
YAB1
---------->
DOF2
------->
TEIL
<--------
ttagatgagatatgtatacacgtaacgtaacagtgacctttgttatagaattttaaacaaaagaaatcaaagatatggaccgtcataatatccaatggtg
26817900
<---------
HSFB2a(2)
--------->
HSFB2a(2)
--------->
MYB52(1)
--------->
LBD16
------->
TEIL
<---------
ANAC46
<---------
ANAC46
<---------
AtLEC2
<---------
ANAC58
-------->
HAHB4
<---------
ANAC58
<---------
ANAC58
<---------
YAB1
--------->
KAN4(1)
--------->
ARR11(3)
<---------
AHL20(2)
<----------
TaMYB80
<---------
AHL20(2)
--------->
AHL20(2)
---------->
TaMYB80
----------->
GT1
--------->
GLK1(2)
----
ANAC46
--------->
CCA1(2)
<---------
ANAC58
<-------
MYC3
<---------
CCA1(2)
-
ATHB12
<----------
DOF2
<---------
KAN4(2)
------->
MYC3
----------->
GT1
--------->
YAB1
-
gagaaaggctgctttagagagatgcgattggaatatgcgtggaacttacagaaaaacgtgttaatttcttggaatgtgaatcttttaattatagtttcag
26818000
<---------
AHL20(2)
<----------
DOF2
------>
ZmHOX2a(2)
--------->
ARR14(1)
--------->
CCA1(2)
--------->
AGP1
--------->
ARR11(3)
--------->
ARR14(2)
---------
<---------
ARR14(2)
<--------
<---------
ICU4
<---------
ARR11(3)
--------->
ARR11(3)
<---------
ATHB12
--------->
YAB1
--------->
ICU4
--------->
ICU4
----------->
GT1
--------->
GLK1(2)
<---------
TOE2(3)
----------->
GT1
--------->
DOF2
<---------
ANAC46
<------
ZmHOX2a(2)
--------->
ATHB12
<---------
STY1(2)
agaaaagataaatcattttggcttcgttgaagaatcaagatccgattttatggaaatgagtgaatggaagtaagtttttgctagatagtaaaaatcatgc
26818100
--------->
AHL20(2)
<---------
AHL20(1)
<---------
AHL20(2)
----------->
GT1
<---------
ANAC58
<------
MYB46(1)
<---------
ANAC46
<------
MYB83
<---------
ANAC58
--------->
ATHB12
<---------
bZIP60(2)
------>
ZmHOX2a(1)
<---------
AHL20(2)
<---------
AtLEC2
<---------
At4g35610
--------->
AHL20(2)
<---------
O2
=====================
RAV
<---------
AHL20(2)
<---------
ARR14(2)
<---------
YAB1
<---------
WOX13(1)
--------->
AHL20(2)
--------->
ARR14(2)
<-----------
RAV1(1)
--------->
AHL20(1)
<-------
TEIL
>
YAB1
<---------
CCA1(2)
<---------
YAB1
----------->
RAV1(2)
<---------
TOE2(3)
<--
-
ICU4
<-----------
GT1
--------->
O2
<---------
At4g35610
<---------
YAB1
--------->
AHL20(2)
<---------
ctctcttctcaccatttagtcatatccaagtggcatggcctctgattatgttgggctcctgattggtaaaatatttaatgtattaaattcatatttcaat
26818200
------->
TEIL
<---------
ARR11(1)
<---------
ARR14(2)
--------->
ARR14(2)
<---------
CCA1(2)
<---------
ARR14(1)
--------->
LBD16
<---------
ANAC55(2)
<---------
ANAC58
<---------
ANAC58
--------->
ANAC55(2)
<---------------
AGL15
<---------
AHL20(2)
----
===============================================================================
MADS_MADS
<---------
ICU4
<---------
LBD16
<---
--------->
ARR11(3)
<-----------
GT1
*
TSS
<---------
ARR11(3)
--------->
HSFC1(2)
<---------------
AGL15
--------->
YAB1
<---------
HSFB2a(1)
<---------
DAG2
--------------->
AGL15
---------->
DOF2
--------------->
AGL15
--------->
AHL20(2)
<---------
AHL20(2)
---------->
DOF2
-------
ANAC55(2)
<---------
HSFC1(2)
--------->
TOE2(3)
<-----------
GT1
<--------
--
GT1
--------->
GLK1(2)
--------->
HSFB2a(1)
<---------
MYB59
<----------
DOF2
----------
acttaaagataatcttttcaaaattcagaaatttccgtatctataaaatttagcctaacctttttaaaatggtctttacttctctaaaaagaa
ccgtcaa
26818300
--------->
SPL7
--------->
ARR14(2)
<---------
ZAT18
<---------
ANAC58
<---------
ARR14(2)
--------->
ARR11(3)
<---------
ANAC46
----->
ARR14(2)
<---------
ARR14(2)
<---------
ANAC58
------
ARR14(2)
--------->
ARR14(2)
--------->
ANAC58
-
---
HVH21
--------->
GLK1(2)
<---------
GLK1(2)
--------->
ANAC58
--------->
ARR14(2)
->
GT1
<---------
YAB1
<----------
DOF2
----------->
HVH21
---------->
DOF2
<---------
ARR14(2)
atacgaatacgattctaagttttttagtctttatagtcagtctctcacagattttgtgcattcaaatcacaaagcaagtcgcgtaca
atgggttctgcat
26818400
--------->
RAP2.6(2)
<---------
ATERF1(2)
--------->
ANAC58
--------->
ANAC58
--------->
ANAC46
--------->
RAP2.3(2)
--------->
RAP2.3(3)
--------->
RRTF1(2)
--------->
DEAR3(1)
--------->
RAP2.3(1)
--------->
RRTF1(1)
<------
NtERF2
--------->
ERF1
--------->
ATERF1(1)
--------->
RAP2.6(1)
<---------
WRKY38(1)
<---------
WRKY12
<---------
MYB52(1)
--------->
DOF5.7(2)
<------
NtERF2
------>
NtERF2
--------->
RRTF1(3)
<-----------
HVH21
--------->
DEAR3(1)
--------->
RAP2.6(2)
--------->
RAP2.3(3)
--------->
ATERF1(2)
--------->
RRTF1(2)
<---------
ATERF1(2)
--------->
RAP2.3(2)
--------->
RRTF1(3)
<------
NtERF2
<---------
RRTF1(1)
--------->
ATERF1(1)
--------->
RAP2.3(1)
--------->
ERF1
--------->
DEAR4(2)
--------->
RRTF1(1)
------>
NtERF2
--------->
ABI4(2)
--------->
ABI4(1)
<---------
ATERF1(1)
<---------
DEAR3(1)
--------->
RAP2.3(2)
--------->
ANAC46
--------->
ORA47(2)
--------->
DEAR3(1)
<---------
ALFIN1
--------->
RAP2.3(3)
<------
NtERF2
--------->
RRTF1(3)
--------->
ABI4(1)
--------->
RAP2.3(1)
------>
NtERF2
--------->
ERF1
<---------
DEAR4(2)
------>
ZmHOX2a(2)
<---------
ATERF1(1)
<---------
GLK1(1)
<---------
RAP2.3(1)
--------->
GLK1(1)
<---------
ORA47(2)
<-----------
ARR10
<---------
ERF1
--------->
GLK1(2)
<---------
RAP2.6(1)
--------->
ARR14(3)
------>
NtERF2
<---------
ARR14(2)
<---------
DEAR3(1)
<---------
AGP1
--------->
ANAC46
<---------
ARR14(3)
<---------
RAP2.3(2)
<---------
ARR11(3)
--------->
DEAR3(1)
--------->
ANAC58
--------->
ARR11(3)
--------->
RAP2.3(1)
--------->
ANAC58
--------->
ARR14(2)
--------->
ATERF1(1)
--------->
ANAC55(1)
--------->
ANAC58
--------->
ATERF1(1)
<---------
ATERF1(1)
--------->
ANAC58
--------->
ANAC58
<---------
ATERF1(1)
--------->
ATERF1(2)
<---------
ARR11(3)
<---------
At5g28300
--------->
DEAR4(2)
--------->
DREB2C(2)
--------->
ARR11(3)
<-----------
HVH21
<------
ZmHOX2a(2)
<------
NtERF2
--------->
ANAC58
---
<------
ZmHOX2a(2)
<------
ZmHOX2a(1)
<---------
ATERF1(1)
--------->
ANAC55(2)
------>
NtERF2
=============================
HOX2a_HOX2a
<---------
DEAR3(1)
<---------
ANAC55(2)
<--------
-------->
ARR14(2)
<---------
TOE2(3)
---------->
CDC5
--------->
ANAC46
--------->
DEAR3(1)
tcgatccccttgtcacggccactgaggatctcgccgccgtcaactcggcgccgccactctcaaacctcacgcaagaagaactcaagaaaatcgccgctta
26818500
<---------
ANAC58
<---------
ANAC46
<---------
ANAC46
<---------
bZIP60(2)
<---------
ANAC58
--------->
DEAR3(1)
<---------
O2
--------->
ANAC46
--------->
ANAC58
<--------
<---------
ALFIN1
<---------
GLK1(2)
------->
TEIL
--------->
ANAC46
--------->
ARR14(2)
<---------
ARR14(2)
<---------
ALFIN1
--------->
ALFIN1
<---------
At4g35610
--------->
ARR14(2)
<---------
ABI4(2)
--------->
LBD16
<---------
ZAT2
<------
NtERF2
--------->
GLK1(2)
<---------
TCP16(1)
<---------
ANAC58
<---------
ZAT18
--------->
DEAR3(1)
<-----------
HVH21
--------->
LBD16
<---------
ANAC58
---------
------->
DOF2
<---------
ARR14(2)
<---------
TCP20
--------->
ANAC58
--------->
At4g35610
-
At4g35610
--------->
ARR14(2)
<------
NtERF2
--------->
DEAR3(1)
<---------
CCA1(2)
---------
taaagccgtcgaattcgtcgaatctggaatggttatcggtctcggcactggctccaccgcgaaacacgccgtggctcgtatcagcgagcttctccgagaa
26818600
---
<--
<----
------
--------->
ARR14(2)
<---------
ARR14(2)
<-------
TEIL
--------->
ARR14(1)
--------->
CCA1(2)
<---------
ARR14(2)
<---------
GLK1(2)
--------->
ARR11(1)
<---------
GLK1(1)
--------->
ARR14(2)
--------->
GLK1(1)
--------->
ANAC58
----------->
ARR10
<---------
GLK1(2)
--------->
ANAC58
<------
ZmHOX2a(2)
<---
--------->
YAB1
--------->
AtMYB61
<---------
ARR14(2)
<---
-
HSFB2a(2)
<---------
AHL20(2)
--------->
TOE2(3)
--------->
ARR14(2)
----
>
HSFB2a(2)
<---------
YAB1
------->
GAMYB
<xxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
>
LBD16
--------->
CCA1(2)
--------->
MYB46(3)
--------->
ALFIN1
--------->
AGP1
<-------
ggaaaactcaaggatataatcggaatccctacttcaaccacaacgcatgagcaagcggtgtctctagggataccattatccgatctagattcgcatccgg
26818700
<---------
YAB1
------>
NtERF2
<---------
MYB52(1)
--------->
At1g77200
<-------
GAMYB
--------->
DREB2C(2)
------>
ZmHOX2a(2)
----------->
HVH21
================================
--------->
DEAR3(1)
=================================
--------->
RAP2.3(2)
--------->
ARR14(2)
--------->
ORA47(2)
<---------
ARR14(2)
--------->
RRTF1(1)
<------
NtERF2
<------
NtERF2
<---------
LBD16
<---------
DEAR3(2)
--------->
RAP2.6(1)
<---------
MYB46(3)
--------->
WOX13(1)
<------
NtERF2
<---------
DEAR3(1)
------>
ZmHOX2a(2)
--------->
RAP2.3(3)
<---------
ANAC46
<---------
AGP1
------>
NtERF2
==============================
HOX2a_HOX2a
<---------
ARR14(2)
--------->
RAP2.3(1)
------>
NtERF2
--------->
ARR14(2)
--------->
DEAR3(2)
<------
NtERF2
<---------
ARR11(3)
--------->
ERF1
=============================
HOX2a_HOX2a
--------->
ARR11(3)
--------->
ATERF1(1)
<---------
LBD16
<---------
MYB46(3)
<---------
ATERF1(1)
<---------
ATERF1(1)
------>
MYB55(2)
<---------
RAP2.3(1)
<---------
DEAR3(1)
-------
MYB46(3)
<---------
ANAC46
------>
ZmHOX2a(2)
<---------
LBD16
-----
MYB52(1)
<---------
DEAR3(1)
--------->
ATERF1(1)
--->
LBD16
<---------
ATHB12
--------->
ARR14(2)
<---------
bZIP60(2)
-
------
DEAR3(1)
--------->
ATERF1(1)
==================
HOX2a_HOX2a
<----
------
AtMYB61
<---------
ATERF1(1)
--------->
LBD16
<------
ZmHOX2a(1)
<---------
WOX13(1)
----->
ALFIN1
<---------
DEAR3(1)
<------
ZmHOX2a(2)
===================
HOX2a_HOX2a
--------->
ATHB12
--
LBD16
--------->
WOX13(1)
<---------
ARR14(2)
---------->
DOF2
<------
ZmHOX2a(2)
<---------
YAB1
tggtggatctatcaatcgatggcgccgacgaagtcgatccggctcttaatctggtgaaaggacgcggcggatcgttattgagagagaagatgattgaagg
26818800
Previous
Next
AGI:
At1g71100.1
Description:
RSW10 (RADIAL SWELLING 10); ribose-5-phosphate isomerase. similar to ribose-5-phosphate isomerase [Arabidopsis thaliana] (TAIR:AT2G01290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42241.1); contains InterPro domain Ribose 5-phosphate isomerase; (InterPro:IPR004788)
Range:
from: 26818294
to: 26819333
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.