Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           <------NtERF2                                                                                        ------>NtERF2                                                                                       --------->RAP2.3(2)                                                                                       --------->RAP2.3(3)                ------->TEIL                                                           --------->DEAR3(1)          --------->GLK1(2)            <---------ALFIN1                                --------->RAP2.6(2)          <---------KAN4(2)           <---------SPL7                                  --------->RAP2.3(1)          <---------ARR14(2)          <---------ZAT14                               --------->ANAC58          --------->ARR14(2)          <---------ABI4(2)                             --------->ANAC58          ---------->TaMYB80          --------->ZAT14                               --------->ANAC46    --------->TOE1(2)                --------->DEAR3(1)                       <---------MYB52(2)   <---------ANAC55(2)              --------->ANAC46                      <---------RAP2.6(3)       <   --------->ANAC55(2)  <---------At4g35610                              --------->RAP2.6(2)     <---   <---------ANAC58     --------->ZAT2--------->ABI4(1)                 <---------------------WRI1  -   <---------ANAC55(1)  --------->At4g35610                            --------->At4g35610  <--------   <---------ANAC58  <---------At4g35610       <---------AtLEC2     <------ZmHOX2a(1) --------->DEAR3(2) ----->ICU4    <---------AtLEC2    <---------At5g28300            --------->MYB59 ---------->DOF2<---   tgaatacgtgagaatatgcatgtagcagctaagaactcaccgcaccggtgcaaggcgaaactcgaggttaggaagccgaaacgaacaagccgccgttttc  26765600                                                                                                 <---                                                                                        <---------MYB52(1)                                                                                      --------->DEAR3(1) <---------ANAC58                                                                     <---------ATERF1(2) <---------ANAC58                                                                     --------->ATERF1(2) ---------STY1(2)                        <---------AtMYB61                           <---------LBD16 ------ANAC58                         --------->ALFIN1                              --------->MYB52(1) -------->STY1(2)                   <---------ANAC58                              <------ZmHOX2a(2) -MYB52(1)                          <---------ANAC58                       <----------DOF2       ---- ------ANAC58                 --------->CCA1(2)  ------>ZmHOX2a(1)<----------DOF2<-----------HVH21   cttgctagcctcatccataagcttcttccatgatacgagcgtggtggtctcctattggagaagttcgactttaagtactttccgatcaccggcagtcaat  26765700                                                      --------->LBD16                                                 ----------->HVH21                  --------->GLK1(2)                   <---------ARR14(2)           <------MYB83                        --------->ARR14(2)             <-----------GT1                    <------MYB46(1)                     <---------ARR14(2)         --------->ARR11(3)                   <--------P                           <---------GLK1(2)         <---------ARR11(3)---------->DOF2    <---------MYB52(1)               ----------------->AGL1  ----------->HVH21--------->ARR14(2)       <---------DEAR3(2)          <---------ZAT14  ----------->TGA1 <---------GLK1(2)        <---------MYB46(3)          --------->ZAT14      <------ZmHOX2a(1) ------ARR11(3)  --------->ANAC46       <---------WRKY12     <---------ZAT6    <-----------------AGL1 ----->ARR11(3)<-----------GT1        <-----------HVH21 <-----------HVH21    <---------GLK1(1)   atctctgacgagattttacacgattcgccgaaagttggaccgtcatcggttgggaccgggtcagagttagactctgtagagacccgaatcggagaggaag  26765800                                                                       <---------ANAC58                                                                      <-------TEIL                                                                   <---------ZAT2                                                                   --------->ZAT2                                   --------->ANAC58                <---------At4g35610                                   --------->ANAC46        <-------MYC3<---------ANAC46                                   --------->ANAC58        ------->MYC3<---------ANAC58                           <---------YAB1                 --------->ANAC58<---------ARR14(2)                          ------------>CBF                --------->ANAC55(2)                    ------------>CBF               ---------->DOF2 --------->At4g35610      <--------       <---------ATHB12  --------->YAB1---------->DOF2    --------->ANAC58<---------ZAT14   ------>ZmHOX2a(1)   tgaaggcccatgaataagcccatacaattacaattccaaggaaaagaagtatacaaagacacgttttggagctgcgtaaactgtccccataatcctttgc  26765900                          --------->ANAC46                                         --------->LBD16                          --------->ANAC58                                        --------->LBD16                   ------>NtERF2                                                 <---------HSFB2a(2)                 --------->LBD16                                                 --------->HSFB2a(2)                --------->LBD16                                                <------ZmHOX2a(2)                <---------LBD16                                       --------->LBD16               <---------LBD16                                       <---------ANAC58               <---------ANAC46                                      <---------ANAC58  --------->ARR11(3)              <---------LBD16                                        <---------ANAC55(2)            <---------ARR14(2)                                       <---------ANAC46  <---------ARR11(3)   --------->MYB46(3)     --------->ANAC58        <---------TOE1(3)  <---------ANAC55(1)  ----------- --DOF2     --------->ARR14(2)                    <---------TOE2(3)  --------->ANAC55(2)<------ZmHOX2a(2)   catcaacaacttcgattccggggactacaagcctctgtcttctctctcgtttagggttttattccaaaattccgtgcttcgatcccgaagatcagaaaaa  26766000                                    ------>NtERF2                                   --------->RAP2.6(2)                                   --------->DEAR3(1)               <---------ZAT14                                  --------->MYB46(3)                --------->ZAT14                                  --------->ATERF1(1)              --------->ALFIN1                         --------->GLK1(2)                      --------->ANAC46                    --------->LBD16--------->RAP2.3(2)       ------>ZmHOX2a(2)                    ------>NtERF2 --------->ERF1            <---------GLK1(1)                   <---------DEAR3(1)<------NtERF2         ------->TEIL ---------->DOF2                  <---------LBD16<---------At4g35610       <---------ARR11(3)                  --------->ATERF1(1)--------->RAP2.3(1)   <---------AGP1--------->DAG2                  --------->SPL7 --------->At4g35610       <---------ARR14(2)                 <---------ATERF1(1)--------->LBD16        --------->ARR14(2) >GT1            ------>NtERF2<---------MYB52(1)           --------->ARR11(3)                    <---   atgggtgatgagattgtgcctccggcgaatcagttagccgccgataacttggaaaacgatggatctacggtgcagaaagcgcaattttcagacagggttc  26766100                       --------->At4g35610                       <---------At4g35610                      <-----------ARR10                     <------NtERF2                    --------->LBD16                   <---------ANAC46                   <---------DEAR3(1)                   --------->ALFIN1                  --------->At4g35610                  <---------At4g35610                  --------->ATERF1(1)                  <---------ABI4(1)                  <---------LBD16                  <------NtERF2                 <---------RAP2.3(1)                         <------MYB46(1)                 <---------DEAR4(2)                          <------MYB83                 <---------ATERF1(1)                         ----------->GT1                 <---------ORA47(2)                          <---------ANAC46                 ------>NtERF2                              <------MYB83                 <---------RRTF1(1)                         <------MYB46(1)                 <---------ERF1                         --------->MYB55(2)                --------->ATERF1(2)                     <---------MYB46(3)                <---------ATERF1(2)                    --------->ALFIN1                <---------RAP2.3(2)                    <---------AtMYB61                <---------RAP2.3(3)               --------->GLK1(2)                <---------RAP2.6(2)              <---------GLK1(2)                <---------DEAR3(1)             ----------->ARR10                <---------RRTF1(3)         ----------->GT1<--------P <---------LBD16                <                <---------DREB2C(2)       --------->DAG2--------->MYB111(2)                        <-                <---------RRTF1(2)    <---------WRKY38(1)<-------GAMYB --------->LBD16             <-               <---------ORA47(1)    --------->WRKY18(1)--------->MYB52(2)            ---------->DOF2 ------YAB1    <---------ABI4(1)    <-----------HVH21 <---------MYB52(1) --------->SPL7       <------   tgattcgatcgattttgggcggcggagctaaactcgccggtcaaaaggttagaatcggtggttgggttaaaaccggaagacagcaagggaaagggacttt  26766200                                                  <--------P                          <---------RAP2.6(2)                                                  <---------WOX13(1)              <---------ANAC58                                               <---------TOE1(3)                  <-------GAMYB                                               <---------YAB1                     <---------ANAC58              <---------TOE2(3)     --------->GLK1(1)                            <---------DEAR3(2)              <---------TOE1(3)    --------->GLK1(2)                             --------->MYB55(2)             --------->MYB52(1)    --------->ARR14(2)                            <---------MYB46(3)             <---------DOF5.7(2)   <---------ARR11(1)                            --------->MYB52(2)        <---------TOE2(3)          <---------ARR14(2)                            <------MYB46(1)        <---------TOE1(3)          <-----------ARR10                             <------MYB83    <---------ANAC58               ------->TEIL<---------TOE2(3)      ------>ZmHOX2a(2)    <---------ANAC58              <---------ARR14(1)                --------->ARR11(3)<---------ANAC58 ----------DOF2        <---------ANAC58        <---------AtMYB61  <---------YAB1--------->MYB111(1) --------ANAC58        <---------ANAC58  --------->LBD16  <---------CCA1(2)     <---------AtMYB61 --------ANAC58    <---------MYB46(3)   <-----------RAV1(2)   <----------DOF2  <--------P          <- ----DOF2  --------->DOF5.7(2)    <---------CCA1(2)    <-------TEIL <---------ARR11(3)<---------ANAC58   tgctttccttgaggttaacgatgggtcttgtccagcgaatctccaggttatggttgattcatctctttatgatctctctaggttggttgcgactggaact  26766300                                       ---------->DOF2                                   <---------MYB46(3)                                    <------MYB46(1)                                     <---------ANAC46                                    <------MYB83                                        --------->ALFIN1                                 <---------MYB52(1)                                  <---------ANAC46                                --------->LBD16                                      <---------ANAC58                               --------->ANAC46                                 --------->ATHB12                               <---------HSFB2a(2)                              <---------MYB46(3)                               --------->HSFB2a(2)                             <---------YAB1     <---------ZAT6           <---------LBD16                                 --------->At5g28300     <-----------RAV1(1)     ------>ZmHOX2a(1)                      <---------ANAC46 <---------ANAC58   <---------At5g28300  <---------ARR14(2)        <---------At4g35610       <---------DEAR3(1)  <-----------GT1       <---------GLK1(2)<---------TOE1(3)    --------->At4g35610   <---------LBD16 --------ZAT6           --------->KAN4(2)<---------TOE2(3)    <---------At4g35610 <---------WOX13(1)   tgtgttactgttgatggagttttgaagattcctccggaaggtaaaggtttgaagcagagtattgagcttagcgttgagacggtgattgcggtgggaactg  26766400                --------->At4g35610                                         <------ZmHOX2a(1)            ------->TEIL --------->ZAT6                                  <---------HSFB2a(2)   ------            <---------ARR14(2)                                           --------->HSFB2a(2)  <------            --------->ARR14(2)        ----------->RAV1(2)                <---------HSFC1(1) ---------         --------->ANAC55(2)     --------->WRKY12                        --------->HSFC1(1) <--------         <---------ANAC55(2)     --------->WRKY38(1)                     >>>>>>>ZML2    ------>ZmHOX2a(2)  ===========================HOX2a_HOX2a------>ZmHOX2a(1)     --------->REM1(1)       <---------ARR11(3)  ------>ZmHOX2a(2)   ------>ZmHOX2a(1) --------->LBD16     <----------DOF2 ===================HOX2a_HOX2a   ttgatccgactacgtatccgcttcctaagactaagttgactcctgagtttctcagagatgtgcttcatcttcgttctaggactaacttgatctcagcagt  26766500  Previous    Next  AGI:  At1g70980.1    Description:  SYNC3; ATP binding / aminoacyl-tRNA ligase/ asparagine-tRNA ligase/ aspartate-tRNA ligase/ nucleic acid binding / nucleotide binding. Identical to Asparaginyl-tRNA synthetase, cytoplasmic 3 (SYNC3) [Arabidopsis Thaliana] (GB:Q9SSK1); similar to SYNC1 (EMBRYO DEFECTIVE 2755), ATP binding / aminoacyl-tRNA ligase/ asparagine-tRNA ligase/ aspartate-tRNA ligase/ nucleic acid binding / nucleotide binding [Arabidopsis thaliana] (TAIR:AT5G56680.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ72488.1); similar to hypothetical protein OsI_001933 [Oryza sativa (indica cultivar-group)] (GB:EAY74086.1); similar to hypothetic Range:  from: 26766001    to: 26768285    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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