Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------------AGL15                         --------->ARR14(2)              --------->TOE2(3)   ---------->DOF2                                                 ---          <---------GLK1(1)     --------->ANAC58                --------->CCA1(2)                 <--          --------->GLK1(1)   <---------AtLEC2   --------->ANAC58            ---------->DOF2      <--    <---------AtLEC2     <---------ARR14(2)      --------->ANAC58      --------->CCA1(2)          --- --->ZmHOX2a(1)------>ZmHOX2a(1)--------->ANAC58 --------->ANAC46   ----------->ARR10      ----------   ctctgtccatggagttcctaaattccaaatttgcaagaaagtttcaaaaacaagaaacaaaaacagagatgagatttgggaaagagagaagaaaggttat  26368000                                                                                  <------MYB83                                                                                  <------MYB46(1)                                                                              <---------ANAC46                                                                             <---------MYB46(3)                                                                             <------MYB83                                                                           <--------P                                             --------->bZIP60(1)           <---------MYB52(1)                                             --------->O2          <-----------HVH21                                             <---------bZIP60(1)   <-----------TGA1                                        <---------DOF5.7(2)       --------->DEAR3(1)                                      --------->DOF5.7(2)         --------->DREB2C(2)  <-----------RAV1(2)                                    <---------ANAC58           ------->GAMYB <------MYB46(1)              <---------ANAC58      <---------ANAC58          <---------MYB55(2)<<<<<<<<<MYB98              <---------ANAC58   <---------DEAR3(1)           --------->MYB46(3)<--------P<------ZmHOX2a(1)   <-----------GT1           <---------LBD16 <---------O2   <---------ARR14(2)<------MYB46(1) ------>AHL20(2)            --------->MYB52(1)    --------->At4g35610    <---------MYB46(3) -------AHL20(2)  <---------DOF5.7(2) ----------->HVH21     --------->ARR14(2)<------MYB83=========== -------AHL20(1) <---------REM1(2)  <---------ANAC46----------->HVH21    <---------DEAR3(2) ------>AHL20(1)--------->DOF5.7(2)<------NtERF2  ----------->RAV1(2)<---------WRKY12 <------ZmHOX2a(2) ->GT1        <---------ANAC46 --------->LBD16<-----------HVH21<---------ALFIN1<-------GAMYB       --   tttattaacctcgtttgcgttcacggtttctaccggaggcgtgaacgacgtcgtctgaagcgtaaccaccgtcatcggttgggttgggatcaggagtttg  26368100                                                                                                    <                                                                                                   --                                                                                                  ---                                                                     ------>NtERF2                ---                                                                    --------->ANAC46              ---                                                                    --------->ANAC58              ---                                                                    --------->RAP2.6(2)           <--                                                                    --------->ANAC58              ---                                                                   --------->SPL7                 ---                                                                  <---------ATERF1(1)             ---                                                                  ------>NtERF2                  ----                                                              <---------bZIP60(2)                ----                                                              <---------O2                       <---                                                              <---------ANAC46                   ----                                                           ----------->HVH21                     ----                                                           <---------MYB52(1)                    ----                                                           ----------->TGA1                      ----                                                          <-----------HVH21                     <----                                                          --------->LBD16                       -----                                                         <---------ANAC55(2)                    -----                                                         <---------ANAC46                       -----                                                         <---------ANAC55(1)           <----------DOF2                                                    --------->HSFC1(2)                <---------ANAC58                                                    <---------At4g35610           --------->RAP2.6(3)                                                    <---------HSFC1(2)           --------->ATHB12----                                   <---------HSFB2a(2)   <---------ANAC58        <---------ICU4<-----                                   --------->HSFB2a(2)   <---------ANAC58  --------->DAG2      ------                                   <---------------AGL15 --------->ANAC55(2)    <---------YAB1 ------                             <----------DOF2        --------->HSFB2a(1)   ---------->DOF2     <------ =====HOX2a_HOX2a            <---------DAG2        ------->TEIL<---------LBD16--------->YAB1  ------- ---->ZmHOX2a(2)          --------->ZAT6        <---------REM1(1)--------->DEAR3(1)   <---------ANAC58   atcgaattgagagagattgttcatactaacactttttctaaaacaagatgatgaagcttccgtgacgcggacgccaaaaagcatgatggctttctccccg  26368200        <-------GAMYB      ---------->ID1  <----------DOF2 ------NtERF2 ---->NtERF2 ------>RAP2.3(3) ------>RRTF1(2) ------>DREB2C(2) ------>RAP2.6(2) -------ALFIN1 ------>RAP2.3(2) ------>DEAR3(1) ------>RRTF1(3) ----->DEAR4(2) ----->ATERF1(1) ---NtERF2 ----->RRTF1(1) ----->ORA47(2) ----->ERF1 ----->RAP2.3(1)              --------->MYB59                                                <------- -----ATERF1(1)           --------->MYB111(1)                                                -------- ---->LBD16               <---------MYB46(3)                                             ----------->HVH21 ->NtERF2                <--------P                    <-----------RAV1(1)             --------->O2 ---->ABI4(1)          <---------MYB46(3)    ------->MYC2                              --------->ANAC46 ----->RAP2.6(1)       --------->MYB55(2)    <-------MYC3          <-----------GT1     --------->ANAC55(2) ----ALFIN1           --------->ALFIN1       ------->MYC4      <---------MYB52(1)      <---------O2 --->DEAR3(1)         <---------AtMYB61      <-------MYC2     <-------GAMYB            <---------ANAC58 --->ANAC46          <---------MYB52(1)      ------->MYC3    <---------MYB46(3)        <---------ANAC58 ---LBD16      ----------->HVH21       ----------->HVH21 <---------RAP2.6(2)           <---------ANAC55(2) -->MYB46(3)  <-----------HVH21     <-----------HVH21  --------->ALFIN1 <---------ALFIN1<-----------HVH21   ccgcctttgtcgttgttgtcaccggtggtagttatgtccgtcggacatgtgcgagagttgtggccgttgtttccacactgtgagcaactacgtgacatct  26368300                                                                                         <---------YAB1                                                                                         ----------->TBP                                                  --------->DAG2                       --------------     --------->ANAC58                            --------->DAG2                        <-------------     --------->ANAC58                           ---------->DOF2                     <---------MYB46(3)   --------->LBD16                  --------->GLK1(2)                               --------->MYB52(2)  <---------HSFB2a(2)              --------->ARR11(3)          >>>>>>>>>TBF1   --------->MYB59  --------->HSFB2a(2)              <---------ARR11(3)         *TSS             <---------TOE1(3) --ARR11(3)                        <---------GLK1(2)  ---------->DOF2          <---------TOE2(3) ->ARR11(3)  ---------->DOF2      <---------RVE1(1)----------->GT1 ---------->DOF2  ----------->GT1--   tcttcccgagccagagaaagagagagagagagagagagattttggaatgaaaaaggtaaagagaagaagaaaagagaggtttaggtttgttataaatggg  26368400                                                               <-----------GT1      <---------At4g35610                            ----------->HVH21 <---------GLK1(2)                                   --------->WRKY12 ->AGL15                             --------->ZAT18----------------------->TaNAC69(2)         <----- --AGL15   <----------DOF2         <---------At4g35610      <---------ICU4             <---------ATHB12 ------->ICU4                      --------->At4g35610    <----------DOF2        --------->TOE2(3)  -   aatgattctgcttcttttttttatgtctgtttttgagagctcaccacaaaaacatttgacctttattacttctctgttttaaatctcaaatgactctgtt  26368500            --------->ARR11(3)            <---------AHL20(1)            <---------ICU4            <---------ARR11(3)                                                   <---------WRKY18(1)            --------->AHL20(1)                                                  --------->WRKY12          <---------AHL20(1)                                                    --------->WRKY38(1)          <---------AHL20(2)                                                   <---------WOX13(1)         --------->YAB1                                                      --------->ATHB12        <---------YAB1                                                      <---------YAB1       <---------AHL20(2)                                                <----------DOF2       --------->AHL20(2)                                                <---------DAG2       --------->AHL20(1)                                         <---------ARR11(3)      --------->YAB1                                              --------->ARR11(3)     <---------ATHB12                                             <-----------ARR10     <---------ATHB51                               ---------->DOF2     <---------DAG2 ----MYB52(1)     <----------DOF2          --------->ATHB12      --------->RVE1(1)                 <- --------->ID1 <---------AHL20(2)         <---------YAB1         --------->CCA1(1) -------->ZAP1   <-   ttgtccaattataatattttcttttgtccatcttagtttctattttcattggcccaaagaaaacaaaaaatctcccttttcattgacctagtttgtgatc  26368600                                                   --------->ICU4                      ------------>AtMYB77         <---------YAB1        <---------WOX13(1)                     --------->At5g28300      --------->ATHB12--------->MYB52(1)       <-------GAMYB     <---------AHL20(2)                    ------------>AtMYB77<---------At5g28300     <---------YAB1   ------------>MYB.PH3(1) ----------->GT1 <-----------GT1   <---------------AGL15       ---------->DOF2<---------MYB46(3) <---------ALFIN1       <---------MYB52(1) ---------DOF2  --------->TOE1(3)     --------->ICU4<---------AHL20(2)           <---------ANAC58 --------DAG2   --------->TOE2(3)----------->GT1<---------MYB52(1)               <---------ANAC58   -   actttttttaattggtaacctcaataacggttagaaagaaataatcgacggttattatttgaatttaccacttctaagcacttgtttgccattagccact  26368700                                                  ---------->DOF2                                             --------->TOE2(3)                                ----------------->AGL1                                <-----------------AGL1                        <---------ANAC58                                <-----------------AGL3                        --------->ANAC55(2)                                ----------------->AGL3                        <---------ANAC55(2)                                <-----------------AGL2                        <---------ANAC55(1)                                ----------------->AGL2 >>>>>>>>>>GT-3b        <---------ANAC58                                <-----------------AG----------->GT1           <---------ANAC46                           <---------ANAC58  <-------GAMYB                 <---------MYB52(1)       <                           <---------ANAC58 ----------->GT1        <------MYB46(1)            <------                           <---------ANAC46 ------>ZmHOX2a(2)      <------MYB83  ------->TEIL-------- -------------------->WRI1 --------->ALFIN1 <---------MYB46(3)    <---------AtMYB61         <--------   tccctagttaatatcaccatggagtcgaagcgtggccagttttggatcgttagaaagaaaaatatggataggttgtcgttacgtatataagtattttaaa  26368800                          <----------DOF2                      <---------ZAT18                                                               <                   --------->MYB52(2)                                                              --                   <---------ANAC58                                                                <-                   <---------ANAC58                                     <---------GLK1(1)          <-                  <-------TEIL                                          --------->GLK1(1)          <-               <---------HSFB2a(1)                                 <---------ANAC46                <- -----------RAV1(1)<---------ANAC46                                <---------ANAC55(2)            --- ---AHL20(2)   --------->HSFB2a(1)                               --------->CCA1(2)               <--- ->AHL20(2)    <---------HSFC1(2)               --------->ICU4--------->ANAC58   <---------MYB46(3)<- -AHL20(2)     --------->HSFC1(2)       <-------TEIL          --------->ANAC58  --------->ALFIN1<----   ttttgtggccaattgcaaggttcgtggacttttgtgaatagtttcatgaaatgtttagtgctgcaagttacgagaaatccgagtggatgaagtttctctt  26368900  Previous    Next  AGI:  At1g70000.1    Description:  DNA-binding family protein. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G47390.1); similar to unknown [Populus trichocarpa] (GB:ABK95405.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 26366941    to: 26368362    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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