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Chromosome 1
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Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------------
AGL15
--------->
ARR14(2)
--------->
TOE2(3)
---------->
DOF2
---
<---------
GLK1(1)
--------->
ANAC58
--------->
CCA1(2)
<--
--------->
GLK1(1)
<---------
AtLEC2
--------->
ANAC58
---------->
DOF2
<--
<---------
AtLEC2
<---------
ARR14(2)
--------->
ANAC58
--------->
CCA1(2)
---
--->
ZmHOX2a(1)
------>
ZmHOX2a(1)
--------->
ANAC58
--------->
ANAC46
----------->
ARR10
----------
ctctgtccatggagttc
ctaaattccaaatttgcaagaaagtttcaaaaacaagaaacaaaaacagagatgagatttgggaaagagagaagaaaggttat
26368000
<------
MYB46(1)
<------
MYB83
<---------
ANAC46
<------
MYB83
<------
MYB46(1)
<---------
MYB52(1)
--------->
bZIP60(1)
<--------
P
<---------
O2
<-----------
TGA1
<---------
bZIP60(1)
<-----------
HVH21
<---------
DOF5.7(2)
--------->
DEAR3(1)
--------->
DOF5.7(2)
--------->
DREB2C(2)
<-----------
RAV1(2)
<---------
ANAC58
<---------
ALFIN1
<-------
GAMYB
<---------
ANAC58
<---------
ANAC58
<---------
MYB55(2)
<<<<<<<<<
MYB98
<---------
ANAC58
<---------
DEAR3(1)
--------->
MYB46(3)
<--------
P
<------
ZmHOX2a(1)
<-----------
GT1
<---------
LBD16
--------->
O2
--------->
ARR14(2)
<------
MYB83
===========
------>
AHL20(2)
--------->
MYB52(1)
--------->
At4g35610
<---------
MYB46(3)
-------
AHL20(2)
<---------
DOF5.7(2)
----------->
HVH21
<---------
ARR14(2)
<------
MYB46(1)
-------
AHL20(1)
<---------
REM1(2)
<---------
ANAC46
----------->
HVH21
<---------
DEAR3(2)
------>
AHL20(1)
--------->
DOF5.7(2)
<------
NtERF2
----------->
RAV1(2)
<---------
WRKY12
<------
ZmHOX2a(2)
->
GT1
<---------
ANAC46
--------->
LBD16
<-----------
HVH21
------->
GAMYB
<---------
MYB46(3)
--
tttattaac
ctcgtttgcgttcacggtttctaccggaggcgtgaacgacgtcgtctgaagcgtaaccaccgtcatcggttgggttgggatcaggagtttg
26368100
<
--
---
------>
NtERF2
---
--------->
ANAC46
---
--------->
ANAC58
---
--------->
RAP2.6(2)
<--
--------->
ANAC58
---
--------->
SPL7
---
<---------
ATERF1(1)
---
------>
NtERF2
----
<---------
bZIP60(2)
----
<---------
O2
<---
<---------
ANAC46
----
----------->
HVH21
----
<---------
MYB52(1)
----
----------->
TGA1
----
<-----------
HVH21
<----
--------->
LBD16
-----
<---------
ANAC55(2)
-----
<---------
ANAC46
-----
<---------
ANAC55(1)
<----------
DOF2
--------->
HSFC1(2)
<---------
ANAC58
<---------
At4g35610
--------->
RAP2.6(3)
<---------
HSFC1(2)
--------->
ATHB12
----
<---------
HSFB2a(2)
<---------
ANAC58
<---------
ICU4
<-----
--------->
HSFB2a(2)
<---------
ANAC58
--------->
DAG2
------
<---------------
AGL15
--------->
ANAC55(2)
<---------
YAB1
------
<----------
DOF2
--------->
HSFB2a(1)
---------->
DOF2
<------
=====
HOX2a_HOX2a
<---------
DAG2
------->
TEIL
<---------
LBD16
--------->
YAB1
-------
---->
ZmHOX2a(2)
--------->
ZAT6
<---------
REM1(1)
--------->
DEAR3(1)
<---------
ANAC58
atcgaattgagagagattgttcatactaacactttttctaaaacaagatgatgaagcttccgtgacgcggacgccaaaaagcatgatggctttctccccg
26368200
<-------
GAMYB
---------->
ID1
<----------
DOF2
------
NtERF2
---->
NtERF2
------>
RAP2.3(3)
------>
RRTF1(2)
------>
DREB2C(2)
------>
RAP2.6(2)
-------
ALFIN1
------>
RAP2.3(2)
------>
DEAR3(1)
------>
RRTF1(3)
----->
DEAR4(2)
----->
ATERF1(1)
---
NtERF2
----->
RRTF1(1)
----->
ORA47(2)
----->
ERF1
----->
RAP2.3(1)
--------->
MYB59
<-------
-----
ATERF1(1)
--------->
MYB111(1)
--------
---->
LBD16
<---------
MYB46(3)
----------->
HVH21
->
NtERF2
<--------
P
<-----------
RAV1(1)
--------->
O2
---->
ABI4(1)
<---------
MYB46(3)
------->
MYC2
--------->
ANAC46
----->
RAP2.6(1)
--------->
MYB55(2)
<-------
MYC3
<-----------
GT1
--------->
ANAC55(2)
----
ALFIN1
--------->
ALFIN1
------->
MYC4
<---------
MYB52(1)
<---------
O2
--->
DEAR3(1)
<---------
AtMYB61
<-------
MYC2
<-------
GAMYB
<---------
ANAC58
--->
ANAC46
<---------
MYB52(1)
------->
MYC3
<---------
MYB46(3)
<---------
ANAC58
---
LBD16
----------->
HVH21
----------->
HVH21
<---------
RAP2.6(2)
<---------
ANAC55(2)
-->
MYB46(3)
<-----------
HVH21
<-----------
HVH21
--------->
ALFIN1
<---------
ALFIN1
<-----------
HVH21
ccgcctttgtcgttgttgtcaccggtggtagttatgtccgtcggacatgtgcgagagttgtggccgttgtttccacactgtgagcaactacgtgacat
ct
26368300
----------->
TBP
<---------
YAB1
--------->
DAG2
--------------
--------->
ANAC58
--------->
DAG2
<-------------
--------->
ANAC58
---------->
DOF2
<---------
MYB46(3)
--------->
LBD16
--------->
GLK1(2)
--------->
MYB52(2)
<---------
HSFB2a(2)
--------->
ARR11(3)
>>>>>>>>>
TBF1
--------->
MYB59
--------->
HSFB2a(2)
<---------
ARR11(3)
*
TSS
<---------
TOE2(3)
--
ARR11(3)
<---------
GLK1(2)
---------->
DOF2
<---------
TOE1(3)
->
ARR11(3)
---------->
DOF2
<---------
RVE1(1)
----------->
GT1
---------->
DOF2
----------->
GT1
--
tcttcccgagccagagaaagagagagagagagagagagattttggaatgaaaaaggtaaaga
gaagaagaaaagagaggtttaggtttgttataaatggg
26368400
<-----------
GT1
<---------
At4g35610
--------->
WRKY12
<---------
GLK1(2)
----------->
HVH21
->
AGL15
--------->
ZAT18
----------------------->
TaNAC69(2)
<-----
--
AGL15
<----------
DOF2
--------->
At4g35610
<---------
ICU4
<---------
ATHB12
------->
ICU4
<---------
At4g35610
<----------
DOF2
--------->
TOE2(3)
-
aatgattctgcttcttttttttatgtctgtttttgagagctcaccacaaaaacatttgacctttattacttctctgttttaaatctcaaatgactctgtt
26368500
--------->
ARR11(3)
<---------
ARR11(3)
<---------
AHL20(1)
<---------
ICU4
<---------
WRKY18(1)
--------->
AHL20(1)
--------->
WRKY12
<---------
AHL20(2)
--------->
WRKY38(1)
<---------
AHL20(1)
<---------
WOX13(1)
--------->
YAB1
--------->
ATHB12
<---------
YAB1
<---------
YAB1
--------->
AHL20(2)
<----------
DOF2
<---------
AHL20(2)
<---------
DAG2
--------->
AHL20(1)
--------->
ARR11(3)
--------->
YAB1
<-----------
ARR10
<---------
ATHB51
<---------
ARR11(3)
<---------
ATHB12
---------->
DOF2
<---------
DAG2
----
MYB52(1)
<----------
DOF2
--------->
ATHB12
--------->
CCA1(1)
<-
--------->
ID1
<---------
AHL20(2)
<---------
YAB1
--------->
RVE1(1)
-------->
ZAP1
<-
ttgtccaattataatattttcttttgtccatcttagtttctattttcattggcccaaagaaaacaaaaaatctcccttttcattgacctagtttgtgatc
26368600
--------->
ICU4
------------>
AtMYB77
<---------
YAB1
<---------
WOX13(1)
--------->
At5g28300
--------->
ATHB12
--------->
MYB52(1)
<-------
GAMYB
<---------
AHL20(2)
------------>
AtMYB77
<---------
At5g28300
<---------
YAB1
------------>
MYB.PH3(1)
----------->
GT1
<-----------
GT1
<---------------
AGL15
---------->
DOF2
<---------
MYB46(3)
<---------
ALFIN1
<---------
MYB52(1)
---------
DOF2
--------->
TOE1(3)
--------->
ICU4
<---------
AHL20(2)
<---------
ANAC58
--------
DAG2
--------->
TOE2(3)
----------->
GT1
<---------
MYB52(1)
<---------
ANAC58
-
actttttttaattggtaacctcaataacggttagaaagaaataatcgacggttattatttgaatttaccacttctaagcacttgtttgccattagccact
26368700
---------->
DOF2
--------->
TOE2(3)
----------------->
AGL1
<-----------------
AGL1
<---------
ANAC58
<-----------------
AGL3
--------->
ANAC55(2)
----------------->
AGL3
<---------
ANAC55(2)
<-----------------
AGL2
<---------
ANAC55(1)
----------------->
AGL2
>>>>>>>>>>
GT-3b
<---------
ANAC58
<-----------------
AG
----------->
GT1
<---------
ANAC46
<---------
ANAC58
<-------
GAMYB
<---------
MYB52(1)
<
<---------
ANAC58
----------->
GT1
<------
MYB46(1)
<------
<---------
ANAC46
------>
ZmHOX2a(2)
<------
MYB83
------->
TEIL
--------
-------------------->
WRI1
--------->
ALFIN1
<---------
MYB46(3)
<---------
AtMYB61
<--------
tccctagttaatatcaccatggagtcgaagcgtggccagttttggatcgttagaaagaaaaatatggataggttgtcgttacgtatataagtattttaaa
26368800
<----------
DOF2
<---------
ZAT18
<
--------->
MYB52(2)
--
<---------
ANAC58
<-
<---------
ANAC58
<---------
GLK1(1)
<-
<-------
TEIL
--------->
GLK1(1)
<-
<---------
HSFB2a(1)
<---------
ANAC46
<-
-----------
RAV1(1)
<---------
ANAC46
<---------
ANAC55(2)
---
---
AHL20(2)
--------->
HSFB2a(1)
--------->
CCA1(2)
<---
->
AHL20(2)
<---------
HSFC1(2)
--------->
ICU4
--------->
ANAC58
<---------
MYB46(3)
<-
-
AHL20(2)
--------->
HSFC1(2)
<-------
TEIL
--------->
ANAC58
--------->
ALFIN1
<----
ttttgtggccaattgcaaggttcgtggacttttgtgaatagtttcatgaaatgtttagtgctgcaagttacgagaaatccgagtggatgaagtttctctt
26368900
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AGI:
At1g70000.1
Description:
DNA-binding family protein. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G47390.1); similar to unknown [Populus trichocarpa] (GB:ABK95405.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447)
Range:
from: 26366941
to: 26368362
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.