Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         ---------->DOF2                                    --------------->AGL15                                    <---------------AGL15         <---------At4g35610                             <---------YAB1                --------->AHL20(2)            <---------ARR11(3)     ----------------->AGL2  <---------AHL20(2)   --------->ANAC46 -------DOF2--------->ARR11(3)--------->YAB1              --------->AHL20(2) <-------TEIL ---->TOE2(3)                <---------ATHB12    --------->YAB1   --------->At4g35610   tttaatcgaacataaatctttccttctgcctatcattcccaaaaatcgaaatcaaaaccattaaattcagcaaaacacatacacaaaatcaatgtgttta  26296300                                                              <---------DEAR3(1)                                                             --------->SPL7                                                           --------->REM1(2)                                            <---------At4g35610    <-------GAMYB                                            --------->LBD16--------->ZAT14                  --------->TOE1(2)         --------->At4g35610   <---------MYB46(3)                  --------->TOE2(2)       <---------LBD16<---------------AtSPL3               ----------->RAV1(1)      <---------ARR14(2) <---------ZAT14               --------->At4g35610         --------->MYB52(1)        <---------ATHB12     <------------------SPL14     <---------GLK1(2)       <---------MYB52(2)        --------->WOX13(1) ----------->HVH21          <----------DOF2    ---     <-----------GT1  <------ZmHOX2a(1) --------->ARR14(2) <---------SPL7     <---------DAG2     ----   ttagatttaactaacaacaacataggaactatattcaatcaatttccgctaaatgtgactgtgtacggcgattgagaaaaccttttcgattcgctgaaca  26296400                                                                               =================bZIP_DOF                                                         --------->At4g35610   --------->O2                                                      <-----------------AGL1   <---------TGA1a                                                     <---------ARR14(2)        --------->TGA1a                                                     --------->GLK1(2)         <---------O2                                                <------NtERF2                  =================bZIP_DOF                   --------->TGA2(1)           ------>NtERF2                  <------NtERF2                   <---------TGA2(1)          <---------DEAR3(1)             ------>NtERF2                   <---------bZIP60(1)        --------->ANAC46              <---------DEAR3(1)        <---------ANAC58                     --------->RAP2.6(3)     --------->ANAC58        <---------ANAC58                   --------->ANAC46          --------->ANAC58<----------DOF2 -------->GT1      --------->bZIP60(1)     ----------->HVH21 <---------TOE2(3)--------->ATERF1(1) --- ------->GT1  <---------At4g35610<---------At4g35610 --------->ARR14(2)     --------->ETT(2)      <--   gggaaaatttccttgaagatgacatcatccgattgagcggtttccacgacggcagtatccgatgaggtagcacgaatggcgacgggacttttgttcatcg  26296500            <----------DOF2            <---------DAG2         <---------ALFIN1           <---------MYB46(3)       ----------->RAV1(1)       ------------>MYB.PH3(2)      <---------ETT(1)     --------->ZAT14      --------->At1g77200  <---------ZAT14                                        --------->HSFC1(2)      --------->DEAR4(1)<---------ANAC46                                  <------MYB46(1)         <--      --------->DREB2C(2)  --------->ZAT18                                <------MYB83        -------      --------->DEAR3(1)<---------ANAC58                       <-------TEIL       <---------HSFC1(2) ------>At4g35610       <---------ANAC58              --------->MYB52(1) --------->MYB59    <-------- -------At4g35610----------------->AG      ----------->GT1  --------->GLK1(1)    ------->TEIL--------   agctaacaccgacactttttccaattgagtgtagtagtttgttagaagtgaaatgagaacggagattcaacgagataggtatgaagcttctatttccgcg  26296600   <----------DOF2                                               <---------ANAC58               >>>>> -------WOX13(1)      --------->CCA1(2)                          <---------ANAC46        ---------->DOF2 -->LBD16       <---------ANAC46                                 <---------ANAC58    --------->At4g35610 -LBD16      ----------->TGA1        ----------->ARR10   <---------ZAT18          --------->At4g35610 ->ANAC46    ----------->HVH21 <---------ANAC46          --------->ZAT14          <---------At4g35610   attgacttttgagttgtgacgaagataagaatggtggagaagagactcaatgggaacagtggacatggcgagagagagagagagagcagaagaaagaaga  26296700                                                               <---------AHL20(2)                                                              <---------YAB1                *TSS                                         <---------AHL20(2)   <---------RVE1(1)                                       <---------YAB1                          --   <---------CCA1(1)                                     <---------AHL20(2)                       <--  <---------ARR14(2)                                     --------->ATHB51                       -----  --------->ARR11(3)                            <---------MYB46(3) <---------AHL20(2)          <-----  <---------ARR11(3)                      --------->YAB1 --------->AHL20(2)                    ------ >>>>TBF1   <---------At4g35610    ----------->GT1      --------->ICU4                    <------NtERF2   agaagatattttgtagcagcgaatgttactgaagaagaggttaataagagtcgttggaattatttttattttttgagaaaatagtatttggcagagagat  26296800                                                                                                <----                                                                                                -----                                                                                                <----                                                                                              -------                                                                                              -------                                                                                            ---------                                                                                        --------->At4g35610                                                                                        <---------At4g35610                                                                                        <---------ZAT2                                                                                        --------->ZAT2                                                                                     --------->TGA2(2)                                                                                    <-----------TGA1                                                                                    <-----------HVH21                                                                                   --------->O2 -----                             <------ZmHOX2a(2)                                     <---------TGA1a                            --------->ARR14(2)                                     ==================                            --------->ARR11(3)                                     --------->bZIP60(1)                            <---------ARR11(3)                                     --------->TGA1a                            <---------ARR14(2)                                     --------->ANAC58                            --------->ARR14(3)                   --------->YAB1    --------->bZIP60(2)                            <---------ARR14(3)                  --------->ICU4     <---------bZIP60(1)                           --------->RVE1(1)                    <---------YAB1     --------->ANAC58                  ---------->DOF2                            <---------YAB1        <<<<<<<<<<AtbZIP1              <------MYB46(1)<---------RVE1(1)             ----------->GT1         <---------O2 -----     <----------DOF2    ---------->DOF2               --------->WRKY38(1)          --------->ANAC46 < ------->YAB1 <------MYB83----------->ARR10           <---------ZAT18             ------>NtERF2<----- -------YAB1  <---------ANAC46                     <---------ANAC58           --------->ANAC58<------ ---->CCA1(2)<---------MYB46(3)     <---------AHL20(2)--------->ZAT18         --------->ANAC46------- ----ARR11(3)<---------AtMYB61------>ZmHOX2a(2)    <---------ANAC46           --------->ANAC58<------ --->ARR11(3)--------->MYB46(2)<----------DOF2     <---------ANAC58<---------YAB1<---------ALFIN1 ---   atgataacttttggtttggtgaaaggaaaagatctttttttatttcgaataatgcgtggacttgttattatcaaactataacgccacgtcagcttagatc  26296900                                                                                                <----                                                                                           <---------AHL20(2)                                                                                           <--------HAHB4                                                                                           -------->ATHB1                                              --------->AHL20(2)                           --------->ATHB51                                              <---------AHL20(2)                           --------->YAB1                                             <---------AHL20(2)                            <---------ICU4                                          --------->AHL20(2)                              <---------YAB1  --------->LBD16                        <---------AHL20(2)                               --------->ICU4 <---------ANAC46                     <---------AHL20(2)                                  <---------ATHB51 -----HSFC1(2)      <-------GAMYB     --------->AHL20(2)                                <---------ICU4 ---->HSFC1(2)     <---------DEAR3(2) <---------AHL20(1)                                --------->YAB1 -----HSFB2a(1)   <---------DEAR3(1)  --------->AHL20(1)                               <---------AHL20(2) -->ARR14(2)    <-----------HVH21     --------->ARR11(3)                               --------->AHL20(2) -->ARR11(3)   <---------O2      <---------YAB1                                       <---------AHL20(2) -->ARR10  <-----------HVH21     <---------AHL20(2)                                <---------AHL20(1) ->ZmHOX2a(2)  --------->bZIP60(2)    <---------ARR11(3)                           <---------AHL20(2) ===========================MYC_MYB--------->AHL20(2)                              --------->ARR11(3) ---->HSFB2a(1)--------->O2      --------->AHL20(2)                                <---------ARR11(3) ---------LBD16=============MYC_MYB<---------AHL20(2)                              --------->AHL20(1) -ZmHOX2a(2)   --------->TGA1a--------->AHL20(1)                                   --------->AHL20(2) ---ARR11(3)   <---------TGA1a--------->AHL20(2)                                --------->AHL20(2) -->AGP1   ------>NtERF2      <---------AHL20(2)                                <---------AHL20(2) ---ARR14(2) <---------ALFIN1 <---------AHL20(1)                             --------->YAB1-------->HAHB4 --->ZmHOX2a(1)--------->ANAC46 --------->TOE2(3) <---------AHL20(2)       <---------ARR11(3)<-------   cttccgcgttctctgccacgtcggtagactaaaatattaatatattatttatttttttttttttttttttgagcaacgatattaatatattaattattat  26297000                                                                                    ----------->HVH21                                                                                  --------->At4g35610                                                                                  <---------At4g35610                                                                                 ------>NtERF2                                                                                <---------ATERF1(2)                                                                                <---------RAP2.3(3)                                                                                <---------RAP2.3(2)                                                                               --------->RAP2.6(3)                                                                              --------->MYB52(1)                      --------->ANAC58            <XXXXXXXXXXXXXXXXXXXXMIR157A-C--------->ATERF1(2)                      --------->ANAC58            <XXXXXXXXXXXXXXXXXXXMIR157D----------->HVH21  --------->YAB1      --------->ANAC46   <---------ARR14(2)                ----------->RAV1(2) <<<<<<<<<ARR1     <-------TEIL          <---------GLK1(2)                 --------->At4g35610 <<<<<<<<<ARR2    --------->CCA1(2)      --------->ARR11(3)                <---------At4g35610 -------GT1      <---------ARR11(3)    ----------->ARR10               <---------At5g28300 --YAB1        --------->ANAC46    --------->At4g35610                <-----------GT1   ------>ZmHOX2a(2)   acaatcttactaaatacaagatacaaggaaatttagtagctcagattttgtgttttctattttttgtctgatttaccatctgacggctgatcgatgagtt  26297100                                                              <------MYB83                                                              <------MYB46(1)                                                             --------->MYB46(2)                                                             <---------AtMYB61                                                             --------->MYB59                                                             --------->MYB111(1)                                                           <---------ANAC46                                                         <---------MYB46(3)                                                   ------>ZmHOX2a(2)                                                  <---------GLK1(1)           ----------->GT1                        --------->GLK1(1)           ------>ZmHOX2a(2)                      <------ZmHOX2a(2)          <------ZmHOX2a(2)                      <---------ARR14(2)         --------->ARR11(3)                      --------->ARR14(2)                        <---------         <---------ARR11(3)                      <---------AGP1                  --------->DAG2       <---------YAB1                            <---------ARR11(3)             ---------->DOF2   --------->TOE1(3)                             --------->ARR11(3)          --------->AHL20(2)   --------->TOE2(3)                             <-----------ARR10           <---------AHL20(2)  ----------->GT1  ----------->GT1              <---------CCA1(2)  <---------ANAC46        <---------DAG2   tggaacgttaagatcgtgaaatcgtttatttctgaaaaatagtgaagcacagatctcagtggtttggtatcgtagagatttaaaaagtagctactttttg  26297200  Previous    Next  AGI:  At1g69830.1    Description:  AMY3/ATAMY3 (ALPHA-AMYLASE-LIKE 3); alpha-amylase. similar to AMY2/ATAMY2 (ALPHA-AMYLASE-LIKE 2), alpha-amylase [Arabidopsis thaliana] (TAIR:AT1G76130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41039.1); similar to plastid alpha-amylase [Actinidia chinensis] (GB:AAX33233.1); similar to plastid alpha-amylase [Malus x domestica] (GB:AAX33231.1); contains InterPro domain Glycoside hydrolase family 13; (InterPro:IPR006046); contains InterPro domain Glycosyl hydrolase, family 13, catalytic region; (InterPro:IPR006047); contains InterPro domain Alpha-amylase, C-terminal beta-sheet; (InterPro:IPR012850); contains InterPro domain Range:  from: 26291941    to: 26296716    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version