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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
---------->
DOF2
--------------->
AGL15
<---------------
AGL15
<---------
At4g35610
<---------
YAB1
--------->
AHL20(2)
<---------
ARR11(3)
----------------->
AGL2
<---------
AHL20(2)
--------->
ANAC46
-------
DOF2
--------->
ARR11(3)
--------->
YAB1
--------->
AHL20(2)
<-------
TEIL
---->
TOE2(3)
<---------
ATHB12
--------->
YAB1
--------->
At4g35610
tttaatcgaacataaatctttccttctgc
ctatcattcccaaaaatcgaaatcaaaaccattaaattcagcaaaacacatacacaaaatcaatgtgttta
26296300
<---------
DEAR3(1)
--------->
SPL7
--------->
REM1(2)
<---------
At4g35610
<-------
GAMYB
--------->
LBD16
--------->
ZAT14
--------->
TOE1(2)
--------->
At4g35610
<---------
MYB46(3)
--------->
TOE2(2)
<---------
LBD16
<---------------
AtSPL3
----------->
RAV1(1)
<---------
ARR14(2)
<---------
ZAT14
--------->
At4g35610
--------->
MYB52(1)
<---------
ATHB12
<------------------
SPL14
<---------
GLK1(2)
<---------
MYB52(2)
--------->
WOX13(1)
----------->
HVH21
<----------
DOF2
---
<-----------
GT1
<------
ZmHOX2a(1)
--------->
ARR14(2)
<---------
SPL7
<---------
DAG2
----
ttagatttaactaacaacaacataggaactatattcaatcaatttccgctaaatgtgactgtgtacggcgattgagaaaac
cttttcgattcgctgaaca
26296400
=================
bZIP_DOF
--------->
At4g35610
--------->
O2
<-----------------
AGL1
<---------
TGA1a
<---------
ARR14(2)
--------->
TGA1a
--------->
GLK1(2)
<---------
O2
<------
NtERF2
=================
bZIP_DOF
--------->
TGA2(1)
------>
NtERF2
<------
NtERF2
<---------
TGA2(1)
<---------
DEAR3(1)
------>
NtERF2
<---------
bZIP60(1)
--------->
ANAC46
<---------
DEAR3(1)
<---------
ANAC58
--------->
RAP2.6(3)
--------->
ANAC58
<---------
ANAC58
--------->
ANAC46
--------->
ANAC58
<----------
DOF2
-------->
GT1
--------->
bZIP60(1)
----------->
HVH21
<---------
TOE2(3)
--------->
ATERF1(1)
---
------->
GT1
<---------
At4g35610
<---------
At4g35610
--------->
ARR14(2)
--------->
ETT(2)
<--
gggaaaatttccttgaagatgacatcatccgattgagcggtttccacgacggcagtatccgatgaggtagcacgaatggcgacgggacttttgttcatcg
26296500
<----------
DOF2
<---------
DAG2
<---------
ALFIN1
<---------
MYB46(3)
----------->
RAV1(1)
------------>
MYB.PH3(2)
<---------
ETT(1)
--------->
ZAT14
--------->
At1g77200
<---------
ZAT14
--------->
HSFC1(2)
--------->
DEAR4(1)
<---------
ANAC46
<------
MYB46(1)
<--
--------->
DREB2C(2)
--------->
ZAT18
<------
MYB83
-------
--------->
DEAR3(1)
<---------
ANAC58
<-------
TEIL
<---------
HSFC1(2)
------>
At4g35610
<---------
ANAC58
--------->
MYB52(1)
--------->
MYB59
<--------
-------
At4g35610
----------------->
AG
----------->
GT1
--------->
GLK1(1)
------->
TEIL
--------
agctaacaccgacactttttccaattgagtgtagtagtttgttagaagtgaaatgagaacggagattcaacgagataggtatgaagcttctatttccgcg
26296600
<----------
DOF2
<---------
ANAC58
>>>>>
-------
WOX13(1)
--------->
CCA1(2)
<---------
ANAC46
---------->
DOF2
-->
LBD16
<---------
ANAC46
<---------
ANAC58
--------->
At4g35610
-
LBD16
----------->
TGA1
----------->
ARR10
<---------
ZAT18
--------->
At4g35610
->
ANAC46
----------->
HVH21
<---------
ANAC46
--------->
ZAT14
<---------
At4g35610
attgacttttgagttgtgacgaagataagaatggtggagaagagactcaatgggaacagtggacat
ggcgagagagagagagagagcagaagaaagaaga
26296700
<---------
AHL20(2)
<---------
YAB1
*
TSS
<---------
AHL20(2)
<---------
RVE1(1)
<---------
YAB1
--
<---------
CCA1(1)
<---------
AHL20(2)
<--
<---------
ARR14(2)
--------->
ATHB51
-----
--------->
ARR11(3)
<---------
MYB46(3)
<---------
AHL20(2)
<-----
<---------
ARR11(3)
--------->
YAB1
--------->
AHL20(2)
------
>>>>
TBF1
<---------
At4g35610
----------->
GT1
--------->
ICU4
<------
NtERF2
agaagatattttgtag
cagcgaatgttactgaagaagaggttaataagagtcgttggaattatttttattttttgagaaaatagtatttggcagagagat
26296800
<----
-----
<----
-------
-------
---------
--------->
At4g35610
<---------
At4g35610
<---------
ZAT2
--------->
ZAT2
--------->
TGA2(2)
<-----------
TGA1
<-----------
HVH21
--------->
O2
-----
<------
ZmHOX2a(2)
<---------
TGA1a
--------->
ARR14(2)
==================
--------->
ARR11(3)
--------->
bZIP60(1)
<---------
ARR11(3)
--------->
TGA1a
<---------
ARR14(2)
--------->
ANAC58
--------->
ARR14(3)
--------->
YAB1
--------->
bZIP60(2)
<---------
ARR14(3)
--------->
ICU4
<---------
bZIP60(1)
--------->
RVE1(1)
<---------
YAB1
--------->
ANAC58
---------->
DOF2
<---------
YAB1
<<<<<<<<<<
AtbZIP1
<------
MYB46(1)
<---------
RVE1(1)
----------->
GT1
<---------
O2
-----
<----------
DOF2
---------->
DOF2
--------->
WRKY38(1)
--------->
ANAC46
<
------->
YAB1
<------
MYB83
----------->
ARR10
<---------
ZAT18
------>
NtERF2
<-----
-------
YAB1
<---------
ANAC46
<---------
ANAC58
--------->
ANAC58
<------
---->
CCA1(2)
<---------
MYB46(3)
<---------
AHL20(2)
--------->
ZAT18
--------->
ANAC46
-------
----
ARR11(3)
<---------
AtMYB61
------>
ZmHOX2a(2)
<---------
ANAC46
--------->
ANAC58
<------
--->
ARR11(3)
--------->
MYB46(2)
<----------
DOF2
<---------
ANAC58
<---------
YAB1
<---------
ALFIN1
---
atgataacttttggtttggtgaaaggaaaagatctttttttatttcgaataatgcgtggacttgttattatcaaactataacgccacgtcagcttagatc
26296900
<----
<---------
AHL20(2)
<--------
HAHB4
-------->
ATHB1
--------->
AHL20(2)
--------->
ATHB51
<---------
AHL20(2)
--------->
YAB1
<---------
AHL20(2)
<---------
ICU4
--------->
AHL20(2)
<---------
YAB1
--------->
LBD16
<---------
AHL20(2)
--------->
ICU4
<---------
ANAC46
<---------
AHL20(2)
<---------
ATHB51
-----
HSFC1(2)
<-------
GAMYB
--------->
AHL20(2)
<---------
ICU4
---->
HSFC1(2)
<---------
DEAR3(2)
<---------
AHL20(1)
--------->
YAB1
-----
HSFB2a(1)
<---------
DEAR3(1)
--------->
AHL20(1)
<---------
AHL20(2)
-->
ARR14(2)
<-----------
HVH21
--------->
ARR11(3)
--------->
AHL20(2)
-->
ARR11(3)
<---------
O2
<---------
YAB1
<---------
AHL20(2)
-->
ARR10
<-----------
HVH21
<---------
AHL20(2)
<---------
AHL20(1)
->
ZmHOX2a(2)
--------->
bZIP60(2)
<---------
ARR11(3)
<---------
AHL20(2)
===========================
MYC_MYB
--------->
AHL20(2)
--------->
ARR11(3)
---->
HSFB2a(1)
--------->
O2
--------->
AHL20(2)
<---------
ARR11(3)
---------
LBD16
=============
MYC_MYB
<---------
AHL20(2)
--------->
AHL20(1)
-
ZmHOX2a(2)
--------->
TGA1a
--------->
AHL20(1)
--------->
AHL20(2)
---
ARR11(3)
<---------
TGA1a
--------->
AHL20(2)
--------->
AHL20(2)
-->
AGP1
------>
NtERF2
<---------
AHL20(2)
<---------
AHL20(2)
---
ARR14(2)
<---------
ALFIN1
<---------
AHL20(1)
--------->
YAB1
-------->
HAHB4
--->
ZmHOX2a(1)
--------->
ANAC46
--------->
TOE2(3)
<---------
AHL20(2)
<---------
ARR11(3)
<-------
cttccgcgttctctgccacgtcggtagactaaaatattaatatattatttatttttttttttttttttttgagcaacgatattaatatattaattattat
26297000
----------->
HVH21
--------->
At4g35610
<---------
At4g35610
------>
NtERF2
<---------
ATERF1(2)
<---------
RAP2.3(3)
<---------
RAP2.3(2)
--------->
RAP2.6(3)
--------->
MYB52(1)
--------->
ANAC58
<XXXXXXXXXXXXXXXXXXXX
MIR157A-C
--------->
ATERF1(2)
--------->
ANAC58
<XXXXXXXXXXXXXXXXXXX
MIR157D
----------->
HVH21
--------->
YAB1
--------->
ANAC46
<---------
ARR14(2)
----------->
RAV1(2)
<<<<<<<<<
ARR1
<-------
TEIL
<---------
GLK1(2)
--------->
At4g35610
<<<<<<<<<
ARR2
--------->
CCA1(2)
--------->
ARR11(3)
<---------
At4g35610
-------
GT1
<---------
ARR11(3)
----------->
ARR10
<---------
At5g28300
--
YAB1
--------->
ANAC46
--------->
At4g35610
<-----------
GT1
------>
ZmHOX2a(2)
acaatcttactaaatacaagatacaaggaaatttagtagctcagattttgtgttttctattttttgtctgatttaccatctgacggctgatcgatgagtt
26297100
<------
MYB83
<------
MYB46(1)
--------->
MYB46(2)
<---------
AtMYB61
--------->
MYB59
--------->
MYB111(1)
<---------
ANAC46
<---------
MYB46(3)
------>
ZmHOX2a(2)
<---------
GLK1(1)
----------->
GT1
--------->
GLK1(1)
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
ARR14(2)
--------->
ARR11(3)
--------->
ARR14(2)
<---------
<---------
ARR11(3)
<---------
AGP1
--------->
DAG2
<---------
YAB1
<---------
ARR11(3)
---------->
DOF2
--------->
TOE1(3)
--------->
ARR11(3)
--------->
AHL20(2)
--------->
TOE2(3)
<-----------
ARR10
<---------
AHL20(2)
----------->
GT1
----------->
GT1
<---------
CCA1(2)
<---------
ANAC46
<---------
DAG2
tggaacgttaagatcgtgaaatcgtttatttctgaaaaatagtgaagcacagatctcagtggtttggtatcgtagagatttaaaaagtagctactttttg
26297200
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AGI:
At1g69830.1
Description:
AMY3/ATAMY3 (ALPHA-AMYLASE-LIKE 3); alpha-amylase. similar to AMY2/ATAMY2 (ALPHA-AMYLASE-LIKE 2), alpha-amylase [Arabidopsis thaliana] (TAIR:AT1G76130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41039.1); similar to plastid alpha-amylase [Actinidia chinensis] (GB:AAX33233.1); similar to plastid alpha-amylase [Malus x domestica] (GB:AAX33231.1); contains InterPro domain Glycoside hydrolase family 13; (InterPro:IPR006046); contains InterPro domain Glycosyl hydrolase, family 13, catalytic region; (InterPro:IPR006047); contains InterPro domain Alpha-amylase, C-terminal beta-sheet; (InterPro:IPR012850); contains InterPro domain
Range:
from: 26291941
to: 26296716
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.