Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->AHL20(2)                                                               --------->AHL20(2)                                                           --------->AHL20(2)                                                 --------->AHL20(2)                                                --------->AHL20(1) <---------AHL20(2)                                                <---------AHL20(1) --------->AHL20(2)                                               --------->AHL20(2)<---------AHL20(2)                                           --------->AHL20(2)  <---------AHL20(2)                                           <---------AHL20(2)<---------AHL20(2)                                --------->AHL20(1)         <---------AHL20(2)                                --------->AHL20(2)       --------->AHL20(2)                                --------->ARR11(3)       <---------AHL20(2)                                <---------ARR11(3)   --------->AHL20(2)                                <---------AHL20(1)   <---------AHL20(2)                    ----------->GT1       --------->AHL20(2) --------->AHL20(2)                   --------->DAG2    <---------AHL20(2)--------->AHL20(2)        <---------TOE2(3)                  ---------->DOF2<---------AHL20(2)--------->AHL20(2)   ---------->DOF2                 <---------AHL20(2)  --------->AHL20(2)<---------AHL20(2)        <---------TOE1(3) -------GT1  --------->AHL20(2) <---------AHL20(2) <---------AHL20(2)  <---------AHL20(2)<---------AtLEC2   acctccatgtttcatatatataaagttaaaagaatatatttaaattaaaatatatatatatatatatatatatataaagaattagggtttttcatggtat  25689400                               <---------ANAC58                    ------>ZmHOX2a(1)                 ------>MYB46(1)       <---------------AGL15                 ------>MYB83  <---------ANAC46              --------->HSFC1(2)       ==============================================================              <---------HSFC1(2)       --------------->AGL15           <---------AtMYB61              --------->HSFB2a(1)     ----------------->AGL1      <---------MYB46(3)               --              <---------HSFB2a(1)   <-----------GT1       <---------HSFB2a(2)                    ----             ------->TEIL  <---------ANAC58             ----------->RAV1(2)                     -----            <---------ARR14(2) <---------ANAC58         --------->At4g35610              ------>ZmHOX2a(1)        <------ZmHOX2a(1)  <---------ANAC58<----------DOF2--------->HSFB2a(2)        <-----------GT1   gcataccagaggaagaaccttcctcgagggcttgcttattgccatctttagaaaaatcatctggaagattgttgaggtctaagtaattctcctcatgcct  25689500                                              <---------AHL20(2)                                              --------->AHL20(2)                                             --------->AHL20(2)                                         <------ZmHOX2a(1)                                ---------->DOF2  <---------HSFB2a(2)           <-----------------AG                                    <-------TEIL  --------->HSFB2a(2)          <---------AHL20(2)                         ------>ZmHOX2a(2) =================================================MADS_MADS              <------ZmHOX2a(2) ---->ZmHOX2a(1)       ----------->GT1 --------->MYB59                  --------->ARR11(3) ------->RAV1(2)   ---------->DOF2--------->ICU4                        <---------ARR11(3) ->NtERF2      ---------->DOF2 --------->AHL20(2)                 ---------->DOF2<---------PCF2   cctgccagaaatttcaaaaaagaaagtgtgaatttaaagattaggaaattaatagaagatagaactaagaaagcgatcttgtgggacatatacatagtgg  25689600                                                                                            ---------                                                                                        ----------->RAV1(1)                                                                                        -------------                                                                                        <------------                                                                                       <-------------                                                                                       --------------                                                                                       <------NtERF2                                                                                       --------->ANAC58                                                                                      ------>NtERF2                                                                                      ----------->RAV1(1)                                                                                     --------->PCF2                                                                                    --------->ATERF1(1)                                                                                   <---------DEAR4(2)                                                                                   <---------ATERF1(1)                                                                                   <---------ORA47(2)                                                                                   ------>NtERF2                                                                                   --------->RAP2.6(2)                                                                                   <---------RAP2.3(1)                                                         <---------AHL20(1)       <---------DEAR3(1)                                                       <---------ARR11(3)         <---------RAP2.6(2)                                                       <---------AHL20(1)         --------->ATERF1(2)                                             <---------ICU4                       <---------ATERF1(2)                                             --------->ATHB12                     <---------RAP2.3(3)                                             <--------ATHB1                       <---------RAP2.3(2)                                            --------->ICU4                       <------NtERF2                                --------->LBD16        --------->ARR11(3)        --------->ATERF1(1)                               --------->LBD16       --------->GLK1(2)          <---------ATERF1(1)                   --------->CCA1(2)      --------->YAB1 --------->AHL20(1)     <---------RAP2.3(1)            <---------ANAC46   --------->HSFB2a(2)<---------TOE2(3)            <---------DEAR3(1)   -            <---------ANAC58  <---------LBD16--------->ATHB51             <-------GAMYB--------->ANAC58            <---------ANAC58 <---------LBD16<---------YAB1           <----------DOF2<------NtERF2----   gaaatgagagattggcgtgagataagacttctcccggagagctagaataattgagaatatatattagaagactttcagttggaggcggcaccacaaaagg  25689700 ->DOF2 -->AGL15                                                               --------->AtMYB61 ---AGL15                                                              <---------MYB52(2) ----AGL1              ---------->DOF2                                 <---------ALFIN1 --->AGL3          ----------->GT1                                   ----------->RAV1(1) ---------->GT1  <---------ZAT14          <-------TEIL          <---------At4g35610            <----- -------------------->ANAC81 ---------->DOF2                    --------->At4g35610    <---------CCA1(2)   aagagaaaaacgaatagagagtagtaaaagttaaagaagagaggttcgaaagttttctatcagtttatctgccacaaaccctccctcccatctctctctt  25689800                                                --------->TOE1(3)            <----------DOF2                                                --------------->AGL15 <---------TGA1a                                                <---------------AGL15 --------->O2                                                --------->TOE2(3) <-----------HVH21                                               ----------------->AGL2 ==================bZIP_DOF                                               ----------------->AGL1 ==================bZIP_DOF                                            ----------->HVH21   --------->ALFIN1                                        <---------ANAC58        <---------AtMYB61                                        <---------ANAC58 ---------->DOF2--------->ALFIN1                ----------->GT1      <------MYB46(1)     =======================bZIP_DOF    <--------             --------->ALFIN1        <------MYB83    ---------->DOF2  <---------O2  ----------->GT1           <---------ANAC58    ---------->DOF2 ----------------->AGL3 --------->TGA1a       ---------           <---------ANAC58    =================================================bZIP_DOF<---------AHL20(2) -----DOF2 <---------ANAC46 *TSS   --------->ALFIN1  ===========================bZIP_DOF--------->AHL20(2)   tgtttctctctctgcgtgtggaaactaaattagcaaagtgggtcttgtgaccttaaaaagaaagaggtggtcatgtgggcttaagggggtttaattaaac  25689900                             ------->TEIL              <---------ANAC58                                                      <---------GLK1(1)    ---------->DOF2     <---------AtLEC2              --------->CCA1(2)             --------->GLK1(1) -AHL20(2)    <---------ANAC46               ---------->DOF2                  ---------->DOF2 >AHL20(2)    <---------ANAC58             <---------YAB1               ------>ZmHOX2a(1)   cagagagaaagtgtttgtgtgtgtgtgcatgtatgtgtgtgtgtgatgaaagagagagatgagagggacatttcctgagtgaaaggagatgctagggcta  25690000                                                                --------->ARR11(3)                                                                <---------ARR11(3)                                                           <---------AHL20(2)                      <-                                                        --------->AHL20(1)                         <-                                                        <---------AHL20(2)                         --                                ----------->GT1         --------->AHL20(2)                         <-                         --------->AHL20(2)       --------->TOE1(3)                               <--                         <---------AHL20(2)       --------->TOE2(3)  <----------DOF2     <---------ATHB12               <---------At5g28300       <----------ID1 <---------AHL20(1)             --------->WOX13(1)      <<<<<<<ZML2   <---------ZAT18    ---------->DOF2 <---------------AGL15     --------->AHL20(2)--   ctaccctagaaccctattactgtgcaattaattcatgttaaaaaagacaaacccttaatattttaagaactctttttctcaaaaaaaatcaatgagtttt  25690100  <----------DOF2           <------ZmHOX2a(1) ------>ZmHOX2a(2)      --------->TOE1(2) ==================================HOX2a_HOX2a --------AGP1          --------->YAB1 --------ARR14(2)     <---------YAB1 ------->ARR11(3) <---------ANAC55(2) --------ARR11(3) --------->ANAC55(2)                         ----------->GT1 -------CCA1(2) --------->CCA1(2)      ----------->GT1<----------DOF2 ------->ARR14(2)<-------TEIL  ---------->DOF2--------->AHL20(2)                     ----------->GT1   ggatcttttagttgtgagatacatatcataggaaaaagaaatagtaaaaaaaattcctttcaactagttaaaaaatcaaactgtagatagtaaaaacaaa  25690200                                                                     <---------MYB46(3)                                                          --------->DAG2                                <----------DOF2     ---------->DOF2 <--------P                        <---------YAB1     <-------TEIL  ---------->DOF2               --------->TOE1(3)                     <---------MYB52(1)   --------->CCA1(2)        <---------ANAC58    --------->TOE2(3)                     <---------YAB1      <---------ARR14(2)        <---------ANAC58  ------->TEIL  <---------TOE1(2) <-------GAMYB        --------->ARR14(2)   --------->CCA1(2)      -------->P   ttcccagttttgaagaaatgactgttattgtagacttttaggggatacatgaataaaagaaaagttatgggttgttctcatgaaatcaacctcaaaattt  25690300  Previous    Next  AGI:  At1g68480.1    Description:  JAG (JAGGED); nucleic acid binding / zinc ion binding. similar to JGL/NUB (NUBBIN), nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G13400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42145.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 25687977    to: 25689828    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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