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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(1)
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
ARR11(3)
<---------
AHL20(2)
<---------
ARR11(3)
--------->
AHL20(2)
<---------
AHL20(1)
<---------
AHL20(2)
----------->
GT1
--------->
AHL20(2)
--------->
AHL20(2)
--------->
DAG2
<---------
AHL20(2)
--------->
AHL20(2)
<---------
TOE2(3)
---------->
DOF2
<---------
AHL20(2)
--------->
AHL20(2)
---------->
DOF2
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
TOE1(3)
-------
GT1
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AtLEC2
acctccatgtttcatatatataaagttaaaagaatatatttaaattaaaatatatatatatatatatatatatataaagaattagggtttttcatggtat
25689400
<---------
ANAC58
------>
ZmHOX2a(1)
------>
MYB46(1)
<---------------
AGL15
------>
MYB83
<---------
ANAC46
--------->
HSFC1(2)
==============================================================
<---------
HSFC1(2)
--------------->
AGL15
<---------
AtMYB61
--------->
HSFB2a(1)
----------------->
AGL1
<---------
MYB46(3)
--
<---------
HSFB2a(1)
<-----------
GT1
<---------
HSFB2a(2)
----
------->
TEIL
<---------
ANAC58
----------->
RAV1(2)
-----
<---------
ARR14(2)
<---------
ANAC58
--------->
At4g35610
------>
ZmHOX2a(1)
<------
ZmHOX2a(1)
<---------
ANAC58
<----------
DOF2
--------->
HSFB2a(2)
<-----------
GT1
gcatac
cagaggaagaaccttcctcgagggcttgcttattgccatctttagaaaaatcatctggaagattgttgaggtctaagtaattctcctcatgcct
25689500
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<------
ZmHOX2a(1)
---------->
DOF2
<---------
HSFB2a(2)
<-----------------
AG
<-------
TEIL
--------->
HSFB2a(2)
<---------
AHL20(2)
------>
ZmHOX2a(2)
=================================================
MADS_MADS
<------
ZmHOX2a(2)
---->
ZmHOX2a(1)
----------->
GT1
--------->
MYB59
--------->
ARR11(3)
------->
RAV1(2)
---------->
DOF2
--------->
ICU4
<---------
ARR11(3)
->
NtERF2
---------->
DOF2
--------->
AHL20(2)
---------->
DOF2
<---------
PCF2
c
ctgccagaaatttcaaaaaagaaagtgtgaatttaaagattaggaaattaatagaagatagaactaagaaagcgatcttgtgggacatatac
at
agtgg
25689600
---------
----------->
RAV1(1)
-------------
<------------
<-------------
--------------
<------
NtERF2
--------->
ANAC58
------>
NtERF2
----------->
RAV1(1)
--------->
PCF2
--------->
ATERF1(1)
<---------
DEAR4(2)
<---------
ATERF1(1)
<---------
ORA47(2)
------>
NtERF2
--------->
RAP2.6(2)
<---------
RAP2.3(1)
<---------
AHL20(1)
<---------
DEAR3(1)
<---------
ARR11(3)
<---------
RAP2.6(2)
<---------
AHL20(1)
--------->
ATERF1(2)
<---------
ICU4
<---------
ATERF1(2)
--------->
ATHB12
<---------
RAP2.3(3)
<--------
ATHB1
<---------
RAP2.3(2)
--------->
ICU4
<------
NtERF2
--------->
LBD16
--------->
ARR11(3)
--------->
ATERF1(1)
--------->
LBD16
--------->
GLK1(2)
<---------
ATERF1(1)
--------->
CCA1(2)
--------->
YAB1
--------->
AHL20(1)
<---------
RAP2.3(1)
<---------
ANAC46
--------->
HSFB2a(2)
<---------
TOE2(3)
<---------
DEAR3(1)
-
<---------
ANAC58
<---------
LBD16
--------->
ATHB51
<-------
GAMYB
--------->
ANAC58
<---------
ANAC58
<---------
LBD16
<---------
YAB1
<----------
DOF2
<------
NtERF2
----
gaaatgagagattggcgtgagataagacttctcccggagagctagaataattgagaatatatattagaagactttcagttggaggcggcaccacaaaagg
25689700
->
DOF2
-->
AGL15
--------->
AtMYB61
---
AGL15
<---------
MYB52(2)
----
AGL1
---------->
DOF2
<---------
ALFIN1
--->
AGL3
----------->
GT1
----------->
RAV1(1)
---------->
GT1
<---------
ZAT14
<-------
TEIL
<---------
At4g35610
<-----
-------------------->
ANAC81
---------->
DOF2
--------->
At4g35610
<---------
CCA1(2)
aagagaaaaacgaatagagagtagtaaaagttaaagaagagaggttcgaaagttttctatcagtttatctgccacaaaccctccctcccatctctctctt
25689800
--------->
TOE1(3)
<----------
DOF2
--------------->
AGL15
<---------
TGA1a
<---------------
AGL15
--------->
O2
--------->
TOE2(3)
<-----------
HVH21
----------------->
AGL2
==================
bZIP_DOF
----------------->
AGL1
==================
bZIP_DOF
----------->
HVH21
--------->
ALFIN1
<---------
ANAC58
<---------
AtMYB61
<---------
ANAC58
---------->
DOF2
--------->
ALFIN1
----------->
GT1
<------
MYB46(1)
=======================
bZIP_DOF
<--------
--------->
ALFIN1
<------
MYB83
---------->
DOF2
<---------
O2
----------->
GT1
<---------
ANAC58
---------->
DOF2
----------------->
AGL3
--------->
TGA1a
---------
<---------
ANAC58
=================================================
bZIP_DOF
<---------
AHL20(2)
-----
DOF2
<---------
ANAC46
*
TSS
--------->
ALFIN1
===========================
bZIP_DOF
--------->
AHL20(2)
tgtttctctctctgcgtgtggaaactaa
attagcaaagtgggtcttgtgaccttaaaaagaaagaggtggtcatgtgggcttaagggggtttaattaaac
25689900
------->
TEIL
<---------
ANAC58
<---------
GLK1(1)
---------->
DOF2
<---------
AtLEC2
--------->
CCA1(2)
--------->
GLK1(1)
-
AHL20(2)
<---------
ANAC46
---------->
DOF2
---------->
DOF2
>
AHL20(2)
<---------
ANAC58
<---------
YAB1
------>
ZmHOX2a(1)
cagagagaaagtgtttgtgtgtgtgtgcatgtatgtgtgtgtgtgatgaaagagagagatgagagggacatttcctgagtgaaaggagatgctagggcta
25690000
--------->
ARR11(3)
<---------
ARR11(3)
<---------
AHL20(2)
<-
--------->
AHL20(1)
<-
<---------
AHL20(2)
--
----------->
GT1
--------->
AHL20(2)
<-
--------->
AHL20(2)
--------->
TOE1(3)
<--
<---------
AHL20(2)
--------->
TOE2(3)
<----------
DOF2
<---------
ATHB12
<---------
At5g28300
<----------
ID1
<---------
AHL20(1)
--------->
WOX13(1)
<<<<<<<
ZML2
<---------
ZAT18
---------->
DOF2
<---------------
AGL15
--------->
AHL20(2)
--
ctaccctagaaccctattactgtgcaattaattcatgttaaaaaagacaaacccttaatattttaagaactctttttctcaaaaaaaatcaatgagtttt
25690100
<----------
DOF2
<------
ZmHOX2a(1)
------>
ZmHOX2a(2)
--------->
TOE1(2)
==================================
HOX2a_HOX2a
--------
AGP1
--------->
YAB1
--------
ARR14(2)
<---------
YAB1
------->
ARR11(3)
<---------
ANAC55(2)
--------
ARR11(3)
--------->
ANAC55(2)
----------->
GT1
-------
CCA1(2)
--------->
CCA1(2)
----------->
GT1
<----------
DOF2
------->
ARR14(2)
<-------
TEIL
---------->
DOF2
--------->
AHL20(2)
----------->
GT1
ggatcttttagttgtgagatacatatcataggaaaaagaaatagtaaaaaaaattcctttcaactagttaaaaaatcaaactgtagatagtaaaaacaaa
25690200
<---------
MYB46(3)
--------->
DAG2
<----------
DOF2
---------->
DOF2
<--------
P
<---------
YAB1
<-------
TEIL
---------->
DOF2
--------->
TOE1(3)
<---------
MYB52(1)
--------->
CCA1(2)
<---------
ANAC58
--------->
TOE2(3)
<---------
YAB1
<---------
ARR14(2)
<---------
ANAC58
------->
TEIL
<---------
TOE1(2)
<-------
GAMYB
--------->
ARR14(2)
--------->
CCA1(2)
-------->
P
ttcccagttttgaagaaatgactgttattgtagacttttaggggatacatgaataaaagaaaagttatgggttgttctcatgaaatcaacctcaaaattt
25690300
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AGI:
At1g68480.1
Description:
JAG (JAGGED); nucleic acid binding / zinc ion binding. similar to JGL/NUB (NUBBIN), nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G13400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42145.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087)
Range:
from: 25687977
to: 25689828
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.