Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    ------>ZmHOX2a(2)                                                                 --------->CCA1(2)                                                                 <------ZmHOX2a(2)                                                                --------->AGP1                                                                <---------ARR14(2)                                                    <-----------ARR10                                                    --------->ARR11(3)                                                    <---------ARR11(3)                                                   --------->CCA1(1)                                                   --------->RVE1(1)                    <---------ATHB12             --------->AHL20(2)                  ------>MYB83               --------->AHL20(2) <---------ARR11(3)          --------->AtLEC2                  --------->AHL20(2)  <---------AGP1 --------->TOE2(3)     --------->ANAC46 ---------->DOF2    --------->AHL20(2)     --------->ARR14(2) -----ZAT6--------->ANAC46              <---------ATHB12        --------->ARR11(3)   <-----------GT1 ------>GT1       ------>MYB46(1)       --------->AHL20(2)      <-----------ARR10 --------->MYB52(2)   gttaaatactccatggaaccaaatcaaagtgaaacaagctcaataaataaaaaaaatctcatcgaagatctaatctaatttcattagttacaaaatgaaa  22269300                                                  ----------------->AGL1                                              <---------ANAC58                                              <---------ANAC58                                       --------->SPL7                                    <---------ANAC58                              <------ZmHOX2a(1)                                    <---------ANAC55(2)                       =======================                    --------->CCA1(2)<---------SPL7                           =======================               ---------->DOF2      <---------ANAC58  --------->ARR14(2)      <------ZmHOX2a(1)            <---------WOX13(1)      --------->ANAC55(2)                    <---------LBD16         <-         <---------YAB1            ------>ZmHOX2a(2)  <---------ARR14(2)<---------GLK1(1)--------->GLK1(2)       --------->YAB1              --------------->AtSPL3        ---------->DOF2  ===================     <---------TOE2(3)             --------------->AtSPL8       <---------ATHB12  ===================   tgcgattaatgctaattgaaagataagaaaatggtgatccgtaccattttgtgccgaatttgaacaatgaagcgatatcaggaaggagaagaatcgaatc  22269400                      <------ZmHOX2a(2)                     --------->ARR14(2)                     <---------ARR14(2)                     --------->ARR11(3)                     <---------ARR11(3)                     <---------ARR14(3)         <---------At4g35610         --------->At4g35610        <-----------RAV1(1)       ------>ZmHOX2a(2)      --------->CCA1(2)      <------ZmHOX2a(2)     --------->AGP1  --------->AGP1     --------->ARR11(3)     --------->ARR14(2)     <---------ARR14(2)     <---------ARR11(3)------>ZmHOX2a(2)     <---------AGP1  <---------AGP1   ----------->ARR10 --------->ARR14(3)                                                      --------   <-------TEIL    ----------->ARR10                                                         --------  <--------P     --------->YAB1                                                              <------- ============HOX2a_HOX2a                                                                    --------- =============HOX2a_HOX2a                            <---------DOF5.7(2)                  <---------- --------TOE1(2)--------->ICU4                  <---------TOE2(3)                  --------->DAG2 =============HOX2a_HOX2a               --------->YAB1    <---------WOX13(1)      ---------->DOF2 ============HOX2a_HOX2a              --------->GLK1(2) --------->ATHB12    ---------->DOF2 ---------   gaaggtagatctgctgcaattaagatcttggatatataagaatcagaatttaggtgaacgattgattctatagatgaagaaagaaaaagtttttacctaa  22269500                                                                                                 <---                                                                                               <-----                                                                                               ------                                                                                             <-------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                           <---------AtMYB61                                                                                           <---------DEAR3(1)                                                                                          <------NtERF2                                                                                         <---------RRTF1(1)                                                                                        <---------RRTF1(3)                                                                                        <---------RAP2.3(2)                                                                                        <---------DEAR3(1)                                                                                        <---------ANAC46                                                                                        <---------RAP2.3(3)                                                                                        <---------RRTF1(2)                                                                                        <---------ANAC58                                                                                        <---------RAP2.6(2)       --------->AGP1                                                                   <---------ANAC58   <------ZmHOX2a(2)               ---------->DOF2                                 <---------bZIP60(2)  <---------ARR11(3)             --------->ANAC58                --------->At5g28300   <---------LBD16 ->TOE2(3)                       --------->ANAC46         <---------ZAT18          <---------REM1(1) ->TOE1(3)                       --------->ANAC58         --------->ZAT18          <-----------RAV1(1) --MYB59<------ZmHOX2a(2)  <---------ANAC46           --------->DAG2    <---------ARR14(2)--------->ATERF1(1) -------->AG               <---------ANAC58          ---------->DOF2    --------->ARR14(2)------>NtERF2 -GT1 --------->At4g35610  <---------ANAC58       <---------ANAC46      --------->GLK1(2)<---------RAP2.3(1) -------->AGL1        <----------DOF2    <------ZmHOX2a(1)--------->ZAT14   ------>ZmHOX2a(1)<-------GAMYB   acgagatcagatcaatttcaacttctttagcgtctacgaaagaggaaagactgcgtaaagttcacacggtgaagaatccttcgtgatgttgcggcggtcg  22269600                            <---------ZAT2                            <---------At4g35610                            <------NtERF2                            --------->At4g35610                           <---------DEAR3(2)                           ------>NtERF2                           <---------ATERF1(1)                          <---------ATERF1(2)    ----------------->AGL1--------->DEAR3(1) ---NtERF2                <---------DEAR3(1) ----DEAR3(1)             --------->ATERF1(2) --->ETT(1)              --------->DEAR4(2)                           --------->DAG2 ----HVH21               --------->ATERF1(1)                         ---------->DOF2 -DEAR3(2)               <---------LBD16       ----------->GT1     *TSS                     >>>>>>>>>TBF1 -MYB46(3)      <---------At4g35610   --------->ARR11(3)          <------ZmHOX2a(1)      >>>>>>>>>TBF1 -SPL7          --------->At4g35610>>>>>>>>>TBF1----------->GT1 ----------->GT1  --------------------   gagattgtcttattgggaagcttaatcgccggctgaagaagaaattgaaatggaaaatcgacgaagtaggaaaaaggaatgaagaacagaagaagaagaa  22269700                   ------->MYC4                   <-------MYC4                   ------->MYC2                   <-------MYC2                   <-------MYC3                          --------->LBD16       --------->LBD16                   ------->MYC3                         <---------ANAC46      <---------RAP2.6(2)                  <---------ANAC46                      <---------LBD16      <---------LBD16                  --------->O2                      <---------SPL7         --------->ARR14(2)                  <---------O2                  <---------ANAC58      --------->TOE2(3)                  <---------TGA1a           <------------CBF     --------->MYB46(3)                  --------->TGA1a         <-------TEIL <---------LBD16--------->YAB1                  --------->ANAC55(2)  ----------->GT1--------->MYB52(1)   <---------ARR14(2)                  <--------ABF1       <---------------AtSPL8     ------------>CBF                  <---------ANAC55(2) --------->ALFIN1--------->SPL7 ----------->GT1 ---->ANAC81 ----------->HVH21     ------->TEIL <---------ANAC58>>>>>>>>>>>>>>>>>LFY   <----------DOF2   gacagagaggtatggatgacacgtgtaagactccatgaatgtggtacattgcttcgtaccgggagtaaccaatgttaaatccggcttagctttgattttt  22269800                                                       --------->REM1(1)                                                      <-------TEIL            ----------->GT1                                                   <------MYB83              --------->ALFIN1                                                   <------MYB46(1)         <---------ANAC46                                                  --------->MYB59     --------->YAB1                                                  <---------------AtSPL8   <---------bZIP60(2)                               <---------ANAC58   --------------->AtSPL8--------->ICU4                          <------MYB83  --------->AtMYB61             <---------ICU4                <                       >>>>>>>>>SARD1   <---------ALFIN1             --------->ICU4                 <                       >>>>>>>>>CBP60g --------->MYB46(3)          ------>MYB46(1)                  <              <---------AHL20(2)      <<<<<<<<<<<<<<<<<LFY         ------>MYB83  <-------TEIL      <-             <---------AHL20(2)<---------ANAC58   --------->MYB46(2) <---------ATHB12        <-------TEIL        <---------MYB52(1)<------MYB46(1)         --------->MYB111(1)<---------ATHB51     <---------DEAR3(2)   gagtttctcggtttttttatttgaaatttggtttcttatcgaccactggaattaggtacatcaaaaaccaaataatgatgtggttcattcttcggttcag  22269900                       <---------LBD16                     <-----------GT1                     <---------WRKY18(1)           ---------->DOF2                        --------->MYB46(3)        --------->TOE2(3)                      --------->YAB1       --------->REM1(1) --------->LBD16      <---------ATHB12 ---------ANAC58    --------->WRKY38(1)     --------->WOX13(1)                                   ---- ---------ANAC46    ----------->HVH21   ------>ZmHOX2a(2)                                <---------MYB52(1) ---------ANAC58    --------->WRKY12  <---------ARR11(3)                            --------->GLK1(2) --------LBD16  <---------MYB46(3)    --------->ARR11(3) ----------->RAV1(1) <-----------HVH21   <---   tttcgggttacatcaaagtggtttgaccggattaaacattgatcttcaatcaacaacaacaacaaaatgtccatataagtgtcaagtttctgttatttct  22270000                                                                                       --------->LBD16                        --------->ANAC46                                              --------->DEAR3(1)                        --------->ANAC58                                             <---------At4g35610               ----------->GT1   --------->ANAC46             ---------->DOF2        <---------LBD16    ----------->GT1     --------->ANAC58                      --------->GLK1(1)     ------->TEIL ----->At4g35610    <---------ANAC55(2)                      --------->ARR14(2)   <---------ZAT14 ------At4g35610    --------->ANAC55(2)         ---------->DOF2  --------->ZAT18  --------->ZAT14   gctgaatggataaaaacttgttacataagcaatatacaaaacttagtaaacaaaggctaaacagaaatgcacaaatacttgcaatgcaccggactaaacc  22270100                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                       <---------YAB1                            <---------ICU4                         <-------TEIL        <---------AHL20(2)           --------->ARR11(3)                                     <<<<<<<<<<<<<<<<<LFY --------->AHL20(2)    ---------->DOF2     <---------AHL20(2)              <---------------AtSPL8        --------->YAB1   <---------AHL20(2)  --------->AHL20(2)  <----------DOF2     --------->ANAC46     ------->TEIL    -   gagatttaaagaagctctagtgagatttaataagtgtgtttgattctttgtgtgatatatagtacaagttacattggtcatacatgaatattaatacgtg  22270200  Previous    Next  AGI:  At1g60430.1    Description:  ARPC3 (actin-related protein C3); structural molecule. similar to unnamed protein product [Vitis vinifera] (GB:CAO69281.1); contains InterPro domain ARP2/3 complex, 21 kDa p21-Arc subunit; (InterPro:IPR007204) Range:  from: 22268050    to: 22269667    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g60440.1    Description:  ATCOAA/ATPANK1 (PANTOTHENATE KINASE 1); pantothenate kinase. Identical to Pantothenate kinase 1 (COAA) [Arabidopsis Thaliana] (GB:O80765;GB:Q66GL8); similar to ATPANK2 (PANTOTHENATE KINASE 2), pantothenate kinase [Arabidopsis thaliana] (TAIR:AT4G32180.2); similar to ATPANK2 (PANTOTHENATE KINASE 2) [Arabidopsis thaliana] (TAIR:AT4G32180.3); similar to ATPANK2 (PANTOTHENATE KINASE 2), pantothenate kinase [Arabidopsis thaliana] (TAIR:AT4G32180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66085.1); contains InterPro domain Eukaryotic pantothenate kinase; (InterPro:IPR004567); contains InterPro domain Fumble; (InterPro:IPR011602 Range:  from: 22270162    to: 22272908    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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