Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                              <------                                                                                      <---------ZAT6                                                                                  --------->ZAT14  --                                                                           --------->REM1(2) <-------             <----------DOF2                                        --------->ZAT2<---------ZAT14  <-       --------->YAB1                                      <------ZmHOX2a(2)      --------->ZAT18 ---      <---------ATHB12                                    <---------ARR11(3) <---------ZAT14 --------    --------->WOX13(1)                                    --------->ARR11(3) --------->ZAT14<-------- --------->ANAC58     <---------------AtSPL8          ---------->DOF2   <---------ANAC46    --------- --------->ANAC58  <---------AHL20(2)         --------->YAB1        --------->At4g35610     <------ZmHOX2a(1) --------->ANAC46 --------->YAB1            --------->GLK1(2)      --------->GLK1(2)<---------ANAC46   aacactcaatcaaaactttataaaaatgtacaaagaaaacatcaagaatcaagacaaaaagatcagtagaagctgtgtgtatagtgtagtgggaggattc  20970400                             <---------ALFIN1                            --------->At4g35610                            <---------At4g35610                           ----------->RAV1(1)                         <---------At4g35610                         --------->ZAT2                         --------->At4g35610                        ----------->RAV1(1) -->GLK1(1)           <---------At4g35610 ---GLK1(1)           --------->At4g35610 ------->HSFB2a(2)    <---------ZAT2                           <------ZmHOX2a(2) --ARR14(2)           --------->ZAT2                          <---------ARR11(3)                ----- --------HSFB2a(2)   ----------->RAV1(1)                  ---------->DOF2                       ----- ------>LBD16     --------->ANAC58                 ----------->GT1                   ----------->GT1 ->ARR14(2)       --------->ANAC58              ----------->RAV1(1)           ---------->DOF2  <----- -HSFB2a(1)       --------->ANAC46        --------->MYB52(1)  --------->ARR11(3)  ---------->DOF2 >HSFB2a(1)     ---------->DOF2       ------>NtERF2------->GAMYB        ---------->DOF2        <-----   cctagaagacacaatccaaaacgcagcagcagcacattgcagccaaactgcaacagaaaaaaaagatcaatatacaaaggaaaagaaaggagaaacaatt  20970500                                                                                     <---------LBD16                                                                             <---------ALFIN1                                                                            --------->ZAT14                              --------->ANAC46                              <------NtERF2                              --------->ANAC58                              --------->ZAT18                          ------>MYB83                                      <---------ZAT14                     <-----------GT1       --------->AtMYB61                --------->At4g35610                 <---------AHL20(2)        <---------ALFIN1              --------->ATERF1(1) ---->AHL20(2)  --------->AHL20(2)      --------->ANAC46                 --------->At4g35610 ---->YAB1   ----------->GT1  --------->ANAC55(1)        ----------->HVH21  <---------At4g35610 ----YAB1 ---------->DOF2 ------>MYB46(1) --------->MYB46(3)            <---------ATERF1(1) ----ATHB51 ----------->GT1   --------->ANAC58    <----------DOF2     <------ZmHOX2a(1)           ---   atagatagatgaaaaagataaaattaccatccacgtaaaaatccaccactgcctttgctctgaccctcatgaggaggctgcacagtttggggagagtctt  20970600                                <-----------HVH21                              <------NtERF2                             ------>NtERF2                             --------->ABI4(2)                             --------->At4g35610                             <---------At4g35610                            <---------DEAR3(1)                           --------->ATERF1(1)                           <------NtERF2                           --------->RAP2.3(1)                          <---------RRTF1(1)                          ------>NtERF2                          <---------DEAR4(2)                          <---------RAP2.3(1)                          <---------ERF1                          <---------RAP2.6(1)                          <---------ORA47(2)                          <---------ATERF1(1)                         <---------RRTF1(3)                         <---------ANAC58                         <---------DREB2C(2)                         <---------RRTF1(2)                         <---------DEAR3(1)                         <---------ATERF1(2)                         <---------RAP2.6(2)                         <---------RAP2.3(3)                         <---------RAP2.3(2)                         --------->ATERF1(2)                         <---------ANAC46                         <---------ANAC58                        <---------ABI4(1)                        --------->ATERF1(1)                        <------NtERF2                       ------>NtERF2                       --------->ABI4(2)                       <---------MYB46(3)                                                     -------                       <---------ATERF1(1)                                    <---------AHL20(2)        --------->LBD16<---------ERF1                                        --------->AHL20(1)      <---------LBD16 ----------->HVH21                       <----------DOF2<---------AHL20(1)<----- --------->YAB1       --------->ALFIN1                      --------->At4g35610     <---------YAB1 <---------ICU4       <---------DEAR3(1)                    <---------At4g35610   --------->YAB1 ------>YAB1     --------->MYB52(1)               ------>NtERF2    --------->ARR14(2)    <-------TEIL   tcatcatcaccgggtaacccatcggtggcggcgctgtcacatactgtgtctctgccattgtctgcttcatttctgcatatatatttataaatacatcagt  20970700               <---------ARR14(2)      --------->AHL20(2)                                    --------->YAB1   --------->YAB1                                  --------------->AtSPL8         --------->YAB1 -->WOX13(1)   --------->ARR14(2)                  <---------------AtSPL8        <---------YAB1 ------HVH21--------->ANAC46           --------->ANAC46     <---------ICU4  <-------GAMYB   cacattgattatatgcgaaactgaacttaaaacatatatatcagcaattgtgtaatgtacaagaatgactcaccatgctgttgatgatactgagccattg  20970800                                                                                                 ----                                                                                        <---------MYB52(1)            -------->HAHB4                                                              --------->DOF5.7(2)            <---------ICU4                                                            <---------bZIP60(1)            --------->ATHB12                                                          --------->bZIP60(1)            --------->YAB1            <---------YAB1        ---------->DOF2        ----------->HVH21           <---------ATHB12         --------->ATHB12 ------------>CBF     <-----------GT1      <-----           --------->ICU4      <---------YAB1      <---------ANAC58     <---------AHL20(2)<---------ARR11(3)           <---------YAB1   --------->ICU4         <---------ANAC58   <-----------TBP<---------TOE2(3)         *TSS             <---------At4g35610  <------------CBF ----------->GT1    ----------->TGA1   ctatgtctgtgtaatgatgagttaagagagatgatgaatgatttttgtgaattgcttcaattcaaagtgtatatttatacattttctgacgttatcttcc  20970900                                                                                                   <-                                                                                                 <---       <------------CBF                      <---------MYB52(1)                                  <---     <---------AHL20(1)               <---------HSFB2a(1)        --------->ANAC58               <----     --------->AHL20(1)    --------->ALFIN1 --------->LBD16      --------->ANAC46               -----     <---------ARR11(3)  <---------ANAC46 <---------LBD16        --------->bZIP60(2)           <-----     --------->ARR11(3)  --------->ALFIN1--------->MYB52(1)      --------->ANAC58            <------ZmHOX2a(1)   <---------TOE2(3) <------ZmHOX2a(1)--------->HSFB2a(1)    ------>MYB46(1)          ---------->DOF2 ----->LBD16     <<<<<<<<<MYB98       <---------HSFC1(2)     ------>MYB83        <---------------AGL15 ----LBD16<---------AHL20(2)          --------->HSFC1(2)   <---------MYB59       --------------->AGL15   ggtttaagatattgaatttgttaggaggtgtgttcgtagaaacttccggtttctagccagaccgaacacgacacaacgcgtttcaaataaaagtaggagg  20971000                                                                                                   <-                                                                                                  <--                                                                                              -------                                                                                            ------>MYB83                                                                                            -------->P                               <-----------HVH21                                          ------->GAMYB                             --------->LBD16                                             <---------MYB52(2)                            <---------HSFB2a(2)                                          --------->MYB46(3)     <---------GLK1(2)      <-----------RAV1(2)                                        <-----------GT1  ------>ZmHOX2a(1)         --------->HSFB2a(2)                    ----------->HVH21--------->ANAC58 -----NtERF2           --------->HSFC1(2)                   <---------ANAC46        --------->ANAC55(2) ------ANAC58          --------->HSFB2a(1)                  <---------ANAC58        --------->ANAC58 ------ANAC58          <---------HSFB2a(1)                  <---------ANAC58        <---------ANAC55(2) --NtERF2              <---------HSFC1(2)                  ------->TEIL         --------->YAB1------- ---->ATERF1(1)       <---------TOE1(3)              <---------WRKY38(1)       <---------YAB1 <------ ----ATERF1(1)     ----------->HVH21                 <---------WRKY12    <---------MYB52(1) ------>MYB46(1)   cgtccttgattctggtcgtctctgaaggttccaggtcaaaacacttcataacgagtcaatggacgtgttctcaccggtgttttgataagtaaccaacctt  20971100      <---------------AtSPL3     <---------ANAC58     <---------ANAC46          ------->TEIL            --------->ANAC58     <---------ANAC58       <---------ANAC55(2)        --------->ANAC58--------->ZAT6 ----------RAV1(1)        --------->YAB1               --------->ANAC55(2) -------YAB1           --------->WOX13(1)    <---------ZAT6          <-----------GT1 -->TOE2(3)        --------->YAB1            ----------->GT1  --------->At4g35610 -->TOE1(3)--------->ANAC46 --------->ANAC55(2)        <---------ANAC55(2)              ------>ZmHOX2a(1) ---DAG2  --------->SPL7 <---------ATHB12 <---------ATHB12    <---------At4g35610       =============   attgttgccttgtacgacccataatcaatcatgtatttgggccaatggtgttaaatcacgaatcagcttattaactctctaaatgacatcctcttaaaac  20971200                                        <------MYB83                                        <------MYB46(1)                                        <---------ANAC58                         <---------ANAC55(2)                         --------->ANAC55(2)                <---------ATHB12        <---------ANAC58              ---------->DOF2          <---------AtMYB61         <------ZmHOX2a(2)      <---------ANAC58        <---------ARR11(3)      <---------ANAC58                               <---------AHL20(2)        --------->ARR11(3)      --------->ANAC55(2)                            --------->AHL20(2)  --------->ANAC46   --------->YAB1--------->ATHB12                        --------->ICU4 ===============HOX2a_HOX2a     <---------ANAC55(2)             <---------AHL20(2)         <---------YAB1   taatacacaagatcaccaaagattaataagtgattcgtgatttggtgtccaaactggacgttttatttatagatgagataattaaactaagtgataaatg  20971300  Previous    Next  AGI:  At1g56060.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G32190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68639.1); contains domain PD188784 (PD188784) Range:  from: 20970193    to: 20970809    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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