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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
-------
<------
<---------
ZAT6
--------->
ZAT14
--
--------->
REM1(2)
<-------
<----------
DOF2
--------->
ZAT2
<---------
ZAT14
<-
--------->
YAB1
<------
ZmHOX2a(2)
--------->
ZAT18
---
<---------
ATHB12
<---------
ARR11(3)
<---------
ZAT14
--------
--------->
WOX13(1)
--------->
ARR11(3)
--------->
ZAT14
<--------
--------->
ANAC58
<---------------
AtSPL8
---------->
DOF2
<---------
ANAC46
---------
--------->
ANAC58
<---------
AHL20(2)
--------->
YAB1
--------->
At4g35610
<------
ZmHOX2a(1)
--------->
ANAC46
--------->
YAB1
--------->
GLK1(2)
--------->
GLK1(2)
<---------
ANAC46
aacactcaatcaaaactttataaaaatgtacaaagaaaacatcaagaatcaagacaaaaagatcagtagaagctgtgtgtatagtgtagtgggaggattc
20970400
<---------
ALFIN1
--------->
At4g35610
<---------
At4g35610
----------->
RAV1(1)
<---------
At4g35610
--------->
ZAT2
--------->
At4g35610
----------->
RAV1(1)
-->
GLK1(1)
<---------
At4g35610
---
GLK1(1)
--------->
At4g35610
------->
HSFB2a(2)
<---------
ZAT2
<------
ZmHOX2a(2)
--
ARR14(2)
--------->
ZAT2
<---------
ARR11(3)
-----
--------
HSFB2a(2)
----------->
RAV1(1)
---------->
DOF2
-----
------>
LBD16
--------->
ANAC58
----------->
GT1
----------->
GT1
->
ARR14(2)
--------->
ANAC58
----------->
RAV1(1)
---------->
DOF2
<-----
-
HSFB2a(1)
--------->
ANAC46
--------->
MYB52(1)
--------->
ARR11(3)
---------->
DOF2
>
HSFB2a(1)
---------->
DOF2
------>
NtERF2
------->
GAMYB
---------->
DOF2
<-----
c
ctagaagacacaatccaaaacgcagcagcagcacattgcagccaaa
ctgcaacagaaaaaaaagatcaatatacaaaggaaaagaaaggagaaacaatt
20970500
<---------
LBD16
<---------
ALFIN1
--------->
ZAT14
--------->
ANAC46
<------
NtERF2
--------->
ANAC58
--------->
ZAT18
------>
MYB83
<---------
ZAT14
<-----------
GT1
--------->
AtMYB61
--------->
At4g35610
<---------
AHL20(2)
<---------
ALFIN1
--------->
ATERF1(1)
---->
AHL20(2)
--------->
AHL20(2)
--------->
ANAC46
--------->
At4g35610
---->
YAB1
----------->
GT1
--------->
ANAC55(1)
----------->
HVH21
<---------
At4g35610
----
YAB1
---------->
DOF2
------>
MYB46(1)
--------->
MYB46(3)
<---------
ATERF1(1)
----
ATHB51
----------->
GT1
--------->
ANAC58
<----------
DOF2
<------
ZmHOX2a(1)
---
atagatagatgaaaaagataaaattac
catccacgtaaaaatccaccactgcctttgctctgaccctcatgaggaggctgcacagtttggggagagtctt
20970600
<-----------
HVH21
<------
NtERF2
------>
NtERF2
--------->
ABI4(2)
--------->
At4g35610
<---------
At4g35610
<---------
DEAR3(1)
--------->
ATERF1(1)
<------
NtERF2
--------->
RAP2.3(1)
<---------
RRTF1(1)
------>
NtERF2
<---------
DEAR4(2)
<---------
RAP2.3(1)
<---------
ERF1
<---------
RAP2.6(1)
<---------
ORA47(2)
<---------
ATERF1(1)
<---------
RRTF1(3)
<---------
ANAC58
<---------
DREB2C(2)
<---------
RRTF1(2)
<---------
DEAR3(1)
<---------
ATERF1(2)
<---------
RAP2.6(2)
<---------
RAP2.3(3)
<---------
RAP2.3(2)
--------->
ATERF1(2)
<---------
ANAC46
<---------
ANAC58
<---------
ABI4(1)
--------->
ATERF1(1)
<------
NtERF2
------>
NtERF2
--------->
ABI4(2)
<---------
MYB46(3)
-------
<---------
ATERF1(1)
<---------
AHL20(2)
--------->
LBD16
<---------
ERF1
--------->
AHL20(1)
<---------
LBD16
----------->
HVH21
<----------
DOF2
<---------
AHL20(1)
<-----
--------->
YAB1
--------->
ALFIN1
--------->
At4g35610
<---------
YAB1
<---------
ICU4
<---------
DEAR3(1)
<---------
At4g35610
--------->
YAB1
------>
YAB1
--------->
MYB52(1)
------>
NtERF2
--------->
ARR14(2)
<-------
TEIL
tcatcatcaccgggtaacccatcggtggcggcgctgtcacatactgtgtctctgccattgtctgcttcattt
ctgcatatatatttataaatacatcagt
20970700
<---------
ARR14(2)
--------->
AHL20(2)
--------->
YAB1
--------->
YAB1
--------------->
AtSPL8
--------->
YAB1
-->
WOX13(1)
--------->
ARR14(2)
<---------------
AtSPL8
<---------
YAB1
------
HVH21
--------->
ANAC46
--------->
ANAC46
<---------
ICU4
<-------
GAMYB
cacattgattatatgcgaaactgaacttaaaacatatatatcagcaattgtgtaatgtacaagaatgactcac
catgctgttgatgatactgagccat
tg
20970800
----
<---------
MYB52(1)
-------->
HAHB4
--------->
DOF5.7(2)
<---------
ICU4
<---------
bZIP60(1)
--------->
ATHB12
--------->
bZIP60(1)
--------->
YAB1
<---------
YAB1
---------->
DOF2
----------->
HVH21
<---------
ATHB12
--------->
ATHB12
------------>
CBF
<-----------
GT1
<-----
--------->
ICU4
<---------
YAB1
<---------
ANAC58
<---------
AHL20(2)
<---------
ARR11(3)
<---------
YAB1
--------->
ICU4
<---------
ANAC58
<-----------
TBP
<---------
TOE2(3)
*
TSS
<---------
At4g35610
<------------
CBF
----------->
GT1
----------->
TGA1
ctatgtctg
tgtaatgatgagttaagagagatgatgaatgatttttgtgaattgcttcaattcaaagtgtatatttatacattttctgacgttatcttcc
20970900
<-
<---
<------------
CBF
<---------
MYB52(1)
<---
<---------
AHL20(1)
<---------
HSFB2a(1)
--------->
ANAC58
<----
--------->
AHL20(1)
--------->
ALFIN1
--------->
LBD16
--------->
ANAC46
-----
<---------
ARR11(3)
<---------
ANAC46
<---------
LBD16
--------->
bZIP60(2)
<-----
--------->
ARR11(3)
--------->
ALFIN1
--------->
MYB52(1)
--------->
ANAC58
<------
ZmHOX2a(1)
<---------
TOE2(3)
<------
ZmHOX2a(1)
--------->
HSFB2a(1)
------>
MYB46(1)
---------->
DOF2
----->
LBD16
<<<<<<<<<
MYB98
<---------
HSFC1(2)
------>
MYB83
<---------------
AGL15
----
LBD16
<---------
AHL20(2)
--------->
HSFC1(2)
<---------
MYB59
--------------->
AGL15
ggtttaagatattgaatttgttaggaggtgtgttcgtagaaacttccggtttctagccagaccgaacacgacacaacgcgtttcaaataaaagtaggagg
20971000
<-
<--
-------
------>
MYB83
-------->
P
<-----------
HVH21
------->
GAMYB
--------->
LBD16
<---------
MYB52(2)
<---------
HSFB2a(2)
--------->
MYB46(3)
<---------
GLK1(2)
<-----------
RAV1(2)
<-----------
GT1
------>
ZmHOX2a(1)
--------->
HSFB2a(2)
----------->
HVH21
--------->
ANAC58
-----
NtERF2
--------->
HSFC1(2)
<---------
ANAC46
--------->
ANAC55(2)
------
ANAC58
--------->
HSFB2a(1)
<---------
ANAC58
--------->
ANAC58
------
ANAC58
<---------
HSFB2a(1)
<---------
ANAC58
<---------
ANAC55(2)
--
NtERF2
<---------
HSFC1(2)
------->
TEIL
--------->
YAB1
-------
---->
ATERF1(1)
<---------
TOE1(3)
<---------
WRKY38(1)
<---------
YAB1
<------
----
ATERF1(1)
----------->
HVH21
<---------
WRKY12
<---------
MYB52(1)
------>
MYB46(1)
cgtccttgattctggtcgtctctgaaggttccaggtcaaaacacttcataacgagtcaatggacgtgttctcaccggtgttttgataagtaaccaacctt
20971100
<---------------
AtSPL3
<---------
ANAC58
<---------
ANAC46
------->
TEIL
--------->
ANAC58
<---------
ANAC58
<---------
ANAC55(2)
--------->
ANAC58
--------->
ZAT6
----------
RAV1(1)
--------->
YAB1
--------->
ANAC55(2)
-------
YAB1
--------->
WOX13(1)
<---------
ZAT6
<-----------
GT1
-->
TOE2(3)
--------->
YAB1
----------->
GT1
--------->
At4g35610
-->
TOE1(3)
--------->
ANAC46
--------->
ANAC55(2)
<---------
ANAC55(2)
------>
ZmHOX2a(1)
---
DAG2
--------->
SPL7
<---------
ATHB12
<---------
ATHB12
<---------
At4g35610
=============
attgttgccttgtacgacccataatcaatcatgtatttgggccaatggtgttaaatcacgaatcagcttattaactctctaaatgacatcctcttaaaac
20971200
<------
MYB83
<------
MYB46(1)
<---------
ANAC58
<---------
ANAC55(2)
--------->
ANAC55(2)
<---------
ATHB12
<---------
ANAC58
---------->
DOF2
<---------
AtMYB61
<------
ZmHOX2a(2)
<---------
ANAC58
<---------
ARR11(3)
<---------
ANAC58
<---------
AHL20(2)
--------->
ARR11(3)
--------->
ANAC55(2)
--------->
AHL20(2)
--------->
ANAC46
--------->
YAB1
--------->
ATHB12
--------->
ICU4
===============
HOX2a_HOX2a
<---------
ANAC55(2)
<---------
AHL20(2)
<---------
YAB1
taatacacaagatcaccaaagattaataagtgattcgtgatttggtgtccaaactggacgttttatttatagatgagataattaaactaagtgataaatg
20971300
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AGI:
At1g56060.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G32190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68639.1); contains domain PD188784 (PD188784)
Range:
from: 20970193
to: 20970809
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.