Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->ATHB12                  <---------------AGL15                  --------------->AGL15                 <-----------------AGL3     --------->DAG2          <-------TEIL    ---------->DOF2       --------->At4g35610 ----GAMYB     ------->GAMYB<<<<<<<<<<<<<<<<<LFY ----->At4g35610 ----------------->AGL3                    <-----------GT1 ------At4g35610 ----------------->AGL2                    --------->YAB1     ------->TEIL ---->AtMYB77<---------At4g35610     <---------YAB1    <---------YAB1      <---------YAB1    --------   gttgcataaagttgcaactcccaaaattagctacattggattattggttcttaacttcttataacaacatagtttttatgaatctaaacttgctataaaa  18798500                 <---------YAB1                                          --------->ZAT6           <------MYB83                                                <-----------GT1           <------MYB46(1)                                         --------->ATHB51         --------->ALFIN1                                          <---------ICU4          --------->ZAT6       <------MYB46(1)                                            <---------YAB1         <-----------GT1       <---------ANAC46                                           --------->ICU4    <---------YAB1      --------->MYB111(1)                                       --------->YAB1  --------->TOE2(3)      --------->MYB59    <---------AHL20(2)              --------->GLK1(1)     --------->YAB1      --------->MYB46(2)<---------YAB1                   <---------GLK1(1)    <---------TOE2(3) ->YAB1<------MYB83 ------->TEIL                   <---------ANAC46<--------HAHB4  <---------AHL20(1)   actcaaattaggtgggtttatgaatttttaatgagataatagttggacttcttatgtggaattctctcataattaacactaacattatttttaactctac  18798600              ------>ZmHOX2a(1)            ------>ZmHOX2a(2)           <------ZmHOX2a(2)          <---------ARR11(3)          --------->ARR11(3)          --------->ARR14(3)          <---------GLK1(2)          <---------ARR14(3)          --------->AGP1          --------->ARR14(2)  --------->AHL20(2)          <---------ARR14(2)  --------->YAB1    <-----------GT1 --------->ZAT14             ---------->DOF2               --------->YAB1 <---------AHL20(2) <---------ZAT14      --------->ANAC58                     --------->TOE2(3) --------->AHL20(2) <---------ZAT18      --------->ANAC58        <-----------GT1 <---------ICU4 <---------ALFIN1         --------->ANAC46      <---------AHL20(2)   <---------LBD16   taattttttcaagatcctccactgctctcaaataatatcaaacacacaaaaaaagagagaactaatttaacttgtttcagtcttaattcggagtagacat  18798700                                                                       <------MYB83                                                                       <------MYB46(1)               <-------GAMYB                                          --------->MYB59              <------MYB46(1)                             <---------At4g35610              <---------MYB46(3)                          --------->ZAT2             <---------MYB46(3)              ----------->GT1                     ------------>CBF<---------TOE2(3)<---------MYB52(1)              <------MYB83                --------->WRKY38(1)----------->GT1     <------MYB83          <---------MYB46(3)              --------->WRKY12--------->At4g35610    <------MYB46(1)          --------->MYB111(2)          <---------O2       <---------ZAT2        --------->MYB59   gagactcacaagttgttggttataagaaaaaaaaaaaactcacgttgacaaaatcaattcagctggttaagtttggtttagttcggtttgttcttgggtt  18798800                         ------------>CBF                       --------->ANAC46                 --------->ANAC58                                                            --------                 <---------TGA1a                    ----------->GT1                          <-------                 <---------O2                 --------->ANAC58                        ---------->DOF2                 =============================bZIP_DOF      <-----------GT1         <---------HSFB2a(2)                 --------->TGA1a              --------->ANAC58                <---------ARR14(2)                 --------->ANAC58             --------->ANAC46<---------YAB1  --------->ARR14(2)                 --------->O2      <----------DOF2------>NtERF2             <---------MYB46(3)                 <---------ANAC55(2)   --------->YAB1--------->At5g28300   <---------AtMYB61 <-------               <---------ALFIN1 <-----------GT1  <---------ALFIN1 ---------->DOF2   --------->HSFB2a(2)   agaatttttgttttgggacacgtctactccaatttgacttttcataaaacgacaccgtaaaatcaccattaagcgttgtggttcttctcaaagcagaatc  18798900                                                           <------NtERF2                                                           --------->ATERF1(1)                                                          <---------ATERF1(1)                                                          ------>NtERF2                 --------->ANAC58                         <-----------HVH21        <---------LBD16                                  <---------O2   ------>ZmHOX2a(2)                                     --------->O2  <------ZmHOX2a(2)                                      <---------DEAR3(1) <---------ARR14(2)                                      --------->DEAR3(1) --------->ARR14(2)                                    ------>NtERF2 --------->ARR11(3)                                    --------->LBD16 <---------ARR11(3)                --------->ANAC58   <---------LBD16                --------->TOE2(3) <-----------ARR10    <---------------------WRI1      <---------RAP2.6(2)     --------->ANAC46 ->ARR14(2)      --------->ANAC58  --------->ANAC58  <---------LBD16        <---------ALFIN1 --GLK1(2)--------->LBD16     --------->YAB1      --------->GLK1(1)     --------->At4g35610       --- --ARR14(2)    --------->CCA1(2) ---------->DOF2  <---------GLK1(1)     <---------At4g35610<---------ARR11(3)   gcagatcgtctccggagagacgacaacgagaatcacaaagccatggagttggaattccggcgtcgcgactatggagctacacataaatctcaatttcttc  18799000                                                    -------->P                                                    ------>MYB46(1)                                            --------->O2                             --------->WRKY38(1)                                            <---------O2  <---------DEAR3(1)         --------->ZAT18                                 <---------ALFIN1   ------>MYB83                     <---------ZAT14                                <---------ZAT14    --------->MYB52(1)=================HOX2a_HOX2a                        <----------DOF2<---------ANAC58 <---------ARR14(2)          --------->DOF5.7(2)               --------->ANAC58 --------->ZAT14    ----------->RAV1(1)            <---------ANAC58             ---------->DOF2 ------>ZmHOX2a(1)----------->HVH21 --------->CCA1(2) <---------ANAC58 <-----------HVH21    ------>ZmHOX2a(1)<---------ANAC58 --------->ARR14(2)     <------ZmHOX2a(1) --->ZmHOX2a(1)--------->ANAC58 <---------REM1(2)--------->MYB46(3)  <------ZmHOX2a(2)   ctcggtcacaaactcaaaagcatcctctttcctctacacttgcttctcgtgaccaacaggtctgcgatacgatcccttagaggagcgttcactagctata  18799100                                                                                            <--------                                                                                           <---------YAB1                                                                                         <---------ICU4                                                                                        --------->ICU4                                                             <---------ZAT6             <---------YAB1                                                             ----------->GT1 <---------AHL20(1)                    <---------MYB52(1)                 --------->ATHB12      <---------AHL20(2)                   <---------DAG2                     --------->ICU4         --------->AHL20(1)               ---------->ID1 --------->ATHB12<---------GLK1(1)              --------->AHL20(2)            --------------->AtSPL8            --------->GLK1(1)              --------->ARR11(3) -----     <---------ALFIN1        --------->AHL20(2)    ------>ZmHOX2a(1)         <---------ARR11(3) <----   tcaattcccacatttttgttcccttatccaattcattagtcttctctgaattcctagtgattagagtaaaaaacttcaatatattgtttgattattactg  18799200                                                                             --------->AHL20(1)              <---------YAB1                                                 <---------AHL20(1)           <----------DOF2                                                  --------->AHL20(2)          <---------ANAC58           <---------WOX13(1)            <---------WOX13(1)               < ---GT1   <---------ANAC58         <------ZmHOX2a(1)   ----------->GT1  --------->AHL20(2)          - ---->At4g35610            <---------HSFB2a(2)--------->YAB1     --------->ATHB12               <---- -----At4g35610         --------->ARR11(3) --------->YAB1   <---------AHL20(2)         ----------->GT1   ctgaatttgatggcttttgatttttagttcttgaagaggattgatgcataataagacttgaaaaaattgatttataaaatatatatgtaggctaaaactg  18799300           ------>ZmHOX2a(2)          <------ZmHOX2a(2)         --------->ARR14(2)         <---------ARR14(2)         --------->ARR11(3)                                                                 ---------         <---------ARR11(3)                                                         <---------CCA1(2)      <------NtERF2                  <---------ANAC46                      --------->ARR11(3)     --- ---------At4g35610                  <---------ANAC58   <---------At4g35610--------->ARR14(2)    ---- -------->At4g35610       ------>ZmHOX2a(2)             --------->At4g35610<---------ARR11(3)  ------ -------HVH21       <----------DOF2  <---------ANAC58<---------At4g35610   <---------ARR14(2)  <-----   tcagaggtcgcgatcttcacttctttgatccattgaggggcttggatgtgaatgcttctgctgaagagaatgttgaagatacttgtatatccattgaagc  18799400  Previous    Next  AGI:  At1g50730.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO38919.1); contains domain PTHR13673 (PTHR13673) Range:  from: 18798943    to: 18806931    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version