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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ATHB12
<---------------
AGL15
--------------->
AGL15
<-----------------
AGL3
--------->
DAG2
<-------
TEIL
---------->
DOF2
--------->
At4g35610
----->
At4g35610
----------------->
AGL2
----
GAMYB
------->
GAMYB
<<<<<<<<<<<<<<<<<
LFY
--------->
YAB1
------
At4g35610
----------------->
AGL3
<-----------
GT1
------->
TEIL
---->
AtMYB77
<---------
At4g35610
<---------
YAB1
<---------
YAB1
<---------
YAB1
--------
gttgcataaagttgcaactcccaaaattagctacattggattattggttcttaacttcttataacaacatagtttttatgaatctaaacttgctataaaa
18798500
<---------
YAB1
--------->
ZAT6
<------
MYB46(1)
<-----------
GT1
<------
MYB83
<--------
HAHB4
--------->
ALFIN1
<---------
ICU4
--------->
ZAT6
<---------
ANAC46
--------->
ICU4
<-----------
GT1
<------
MYB46(1)
<---------
YAB1
<---------
YAB1
--------->
MYB46(2)
--------->
YAB1
--------->
TOE2(3)
--------->
MYB59
<---------
YAB1
--------->
GLK1(1)
--------->
YAB1
--------->
MYB111(1)
<---------
AHL20(2)
<---------
GLK1(1)
<---------
TOE2(3)
->
YAB1
<------
MYB83
------->
TEIL
<---------
ANAC46
--------->
ATHB51
<---------
AHL20(1)
actcaaattaggtgggtttatgaatttttaatgagataatagttggacttcttatgtggaattctctcataattaacactaacattatttttaactctac
18798600
------>
ZmHOX2a(1)
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
ARR14(3)
<---------
GLK1(2)
<---------
ARR14(3)
--------->
AGP1
--------->
ARR14(2)
--------->
AHL20(2)
<---------
ARR14(2)
--------->
YAB1
<-----------
GT1
--------->
ZAT14
---------->
DOF2
--------->
TOE2(3)
<---------
ICU4
<---------
ALFIN1
--------->
ANAC58
--------->
YAB1
--------->
AHL20(2)
<---------
ZAT14
--------->
ANAC58
<-----------
GT1
<---------
AHL20(2)
<---------
ZAT18
--------->
ANAC46
<---------
AHL20(2)
<---------
LBD16
taattttttcaagatcctccactgctctcaaataatatcaaacacacaaaaaaagagagaactaatttaacttgtttcagtcttaattcggagtagacat
18798700
<------
MYB46(1)
<------
MYB83
<-------
GAMYB
--------->
MYB59
<------
MYB83
--------->
ZAT2
<------
MYB46(1)
<---------
At4g35610
<---------
MYB46(3)
----------->
GT1
------------>
CBF
<---------
TOE2(3)
<---------
MYB52(1)
<---------
MYB46(3)
--------->
WRKY12
--------->
At4g35610
<------
MYB83
--------->
MYB111(2)
--------->
WRKY38(1)
----------->
GT1
<------
MYB46(1)
<---------
MYB46(3)
<---------
O2
<---------
ZAT2
--------->
MYB59
gagactcacaagttgttggttataagaaaaaaaaaaaactcacgttgacaaaatcaattcagctggttaagtttggtttagttcggtttgttcttgggtt
18798800
------------>
CBF
--------->
ANAC46
--------->
ANAC58
--------
<---------
TGA1a
----------->
GT1
<-------
<---------
O2
--------->
ANAC58
---------->
DOF2
=============================
bZIP_DOF
<-----------
GT1
<---------
HSFB2a(2)
--------->
TGA1a
--------->
ANAC58
<---------
ARR14(2)
--------->
ANAC58
--------->
ANAC46
<---------
YAB1
--------->
ARR14(2)
--------->
O2
<----------
DOF2
------>
NtERF2
<---------
MYB46(3)
<---------
ANAC55(2)
--------->
YAB1
--------->
At5g28300
<---------
AtMYB61
<-------
<---------
ALFIN1
<-----------
GT1
<---------
ALFIN1
---------->
DOF2
--------->
HSFB2a(2)
agaatttttgttttgggacacgtctactccaatttgacttttcataaaacgacaccgtaaaatcaccattaagcgttgtggttcttctcaaagcagaatc
18798900
<------
NtERF2
--------->
ATERF1(1)
<-----------
HVH21
------>
NtERF2
--------->
ANAC58
<---------
ATERF1(1)
<---------
LBD16
<---------
DEAR3(1)
------>
ZmHOX2a(2)
<---------
O2
<------
ZmHOX2a(2)
--------->
O2
<---------
ARR14(2)
--------->
DEAR3(1)
--------->
ARR14(2)
------>
NtERF2
--------->
ARR11(3)
--------->
LBD16
<---------
ARR11(3)
--------->
ANAC58
<---------
LBD16
--------->
TOE2(3)
<-----------
ARR10
<---------------------
WRI1
<---------
RAP2.6(2)
--------->
ANAC46
->
ARR14(2)
--------->
ANAC58
--------->
ANAC58
<---------
LBD16
<---------
ALFIN1
--
GLK1(2)
--------->
LBD16
--------->
YAB1
--------->
GLK1(1)
<---------
At4g35610
---
--
ARR14(2)
--------->
CCA1(2)
---------->
DOF2
<---------
GLK1(1)
--------->
At4g35610
<---------
ARR11(3)
gcagatcgtctccggagagacgacaacgagaatcacaaagcc
atggagttggaattccggcgtcgcgactatggagctacacataaatctcaatttcttc
18799000
-------->
P
------>
MYB46(1)
--------->
O2
--------->
WRKY38(1)
<---------
O2
<---------
DEAR3(1)
--------->
ZAT18
<---------
ALFIN1
------>
MYB83
<---------
ZAT14
<---------
REM1(2)
--------->
MYB52(1)
=================
HOX2a_HOX2a
<----------
DOF2
<---------
ANAC58
<---------
ARR14(2)
--------->
DOF5.7(2)
--------->
ANAC58
--------->
ZAT14
----------->
RAV1(1)
<---------
ANAC58
---------->
DOF2
------>
ZmHOX2a(1)
----------->
HVH21
--------->
CCA1(2)
<---------
ANAC58
<-----------
HVH21
------>
ZmHOX2a(1)
<---------
ANAC58
--------->
ARR14(2)
<------
ZmHOX2a(1)
--->
ZmHOX2a(1)
--------->
ANAC58
<---------
ZAT14
--------->
MYB46(3)
<------
ZmHOX2a(2)
ctcggtcacaaactcaaaagcatcctctttcctctacacttgcttctcgtgaccaacag
gtctgcgatacgatcccttagaggagcgttcactagctata
18799100
<--------
<---------
YAB1
<---------
ICU4
--------->
ICU4
<---------
ZAT6
<---------
YAB1
----------->
GT1
<---------
AHL20(1)
<---------
MYB52(1)
--------->
ATHB12
<---------
AHL20(2)
<---------
DAG2
--------->
ICU4
--------->
AHL20(1)
---------->
ID1
--------->
ATHB12
<---------
GLK1(1)
--------->
AHL20(2)
--------------->
AtSPL8
--------->
GLK1(1)
--------->
ARR11(3)
-----
<---------
ALFIN1
--------->
AHL20(2)
------>
ZmHOX2a(1)
<---------
ARR11(3)
<----
tcaattcccacatttttgttcccttatccaattcattagtcttctctgaattcctagtgattagagtaaaaaacttcaatatattgtttgattattactg
18799200
<---------
AHL20(1)
<---------
YAB1
--------->
AHL20(1)
<----------
DOF2
--------->
AHL20(2)
<---------
ANAC58
<---------
WOX13(1)
<---------
WOX13(1)
-
---
GT1
<---------
ANAC58
<------
ZmHOX2a(1)
----------->
GT1
--------->
AHL20(2)
<
---->
At4g35610
<---------
HSFB2a(2)
--------->
YAB1
--------->
ATHB12
<----
-----
At4g35610
--------->
ARR11(3)
--------->
YAB1
<---------
AHL20(2)
----------->
GT1
ctgaatttgatggcttttgatttttagttcttgaagaggattgatgcataataagacttgaaaaaattgatttataaaatatatatgtag
gctaaaactg
18799300
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ARR11(3)
<---------
ARR11(3)
<---------
ARR14(2)
---------
--------->
ARR14(2)
<---------
CCA1(2)
<------
NtERF2
<---------
ANAC46
--------->
ARR14(2)
---
-------->
At4g35610
<---------
ANAC58
<---------
At4g35610
<---------
ARR11(3)
----
---------
At4g35610
------>
ZmHOX2a(2)
--------->
At4g35610
--------->
ARR11(3)
------
-------
HVH21
<----------
DOF2
<---------
ANAC58
<---------
At4g35610
<---------
ARR14(2)
<-----
tcagaggtcgcgatcttcacttctttgatccattgaggggcttggatgtgaatgcttctgctgaagagaatgttgaagatacttgtatatccattgaagc
18799400
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AGI:
At1g50730.1
Description:
similar to unnamed protein product [Vitis vinifera] (GB:CAO38919.1); contains domain PTHR13673 (PTHR13673)
Range:
from: 18798943
to: 18806931
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.