Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <---------At4g35610                                         --------->MYB46(3)                                         <---------ATHB12                                        ------>MYB83                                        -------->P    --------->ANAC58                                        ------>MYB46(1)            --------->TOE2(3)           --------->ANAC58                          --------->HSFB2a(1)            --------->TOE1(3)         ------->GAMYB   --------->ANAC58           <---------TOE1(2)            --------->YAB1           --------->MYB46(3)               --------->ANAC58      --------->TOE2(3)              <---------MYB52(2)          --------->At4g35610 ---->ZmHOX2a(1)              ------>ZmHOX2a(1)  --------->At4g35610  --------->ANAC58         <----- ------>TOE2(3)        <---------ALFIN1 --------->ANAC58         ----------->RAV1(2)           ======   cctcaaatccctaatcttaatcgaaacacttcctacataaccaaccaattcagcccaagcactaatcttctgaagccatttcgaatgtttcgcatcgatc  17572200                                                           --------->ANAC58                                                           --------->ANAC58                                                           --------->ANAC46                                                          --------->SPL7                                                        <---------SPL7          <---------MYB52(1)                        --------->DEAR3(1)          --------->DOF5.7(2)                       <---------ALFIN1         --------->TOE2(3)                          --------->AtMYB61         --------->TOE1(3)                         --------->MYB46(3)  ------>ZmHOX2a(1)                  ----------->GT1------------------>SPL14  --------->ICU4                ------->GAMYB    --------->REM1(1) <---------YAB1    --------->ATHB12 -ZmHOX2a(2)<---------DOF5.7(2)--------->ANAC46------>ZmHOX2a(1) --------->YAB1<---------ZAT2 ========HOX2a_HOX2a        <---------WRKY12  --------->TOE1(3) --------->ICU4 --------->ZAT2   agtcctgatttcgttaaccatatgaattgttcaacgaaatagtataatccttcaccaccgtacgcgattatgagtaagacgagctcgtgatttgaatccc  17572300               <---------ANAC46               <---------ANAC58               <---------ANAC58        ------>ZmHOX2a(2)       <------ZmHOX2a(2)          --------->HSFB2a(1)      <---------ARR14(2)          <---------HSFB2a(1)      <---------ARR11(3)          --------->HSFC1(2)      --------->ARR14(2)          <---------HSFC1(2)                                          <------NtERF2      <---------ARR14(3)         ------->TEIL                             --------->ATHB12   <-------      --------->ARR11(3) <---------------AtSPL8                   --------->DEAR3(1)        <--------      --------->ARR14(3) <---------------AtSPL3     <----------DOF2------>NtERF2            <--------      <-----------ARR10 <---------ANAC46    --------->ANAC58      ----------->HVH21 <----------DOF2--      --------->GLK1(2) <---------ANAC58    --------->ANAC58----------->HVH21     --------->HSFC1(2)     <------ZmHOX2a(1)  <---------ANAC58--------->LBD16 <---------RAP2.6(2)       <---------HSFC1(2)   atcgtgaggatcttaatgcgttgatgtcttgtacgaattttccgagacggaaggctttgcgactgactccgacgcttgattcgaagcttttgagtcgggg  17572400                                                             <---------GLK1(2)       ------>ZmHOX2a(2)                                     --------->ARR11(3)       ====================================HOX2a_HOX2a       <---------ARR11(3)     ------->TEIL                                 <---------ANAC58     --------->ARR11(3)                           <---------ANAC55(1)     <---------ARR14(2)    --------->ICU4         <---------ANAC58     <---------AGP1        <---------YAB1         --------->ANAC55(2)           --------->REM1(1)     --------->ARR14(2)  --------->YAB1           <---------ANAC55(2)<------ZmHOX2a(1)             --  <---------TOE2(3)     <---------ZAT6       <-----------RAV1(1)  <---------LBD16        <----------DOF2 --LBD16       <---------HSFB2a(2)       <---------YAB1     <---------RVE1(1)   --------->ANAC46   <- -ANAC46       --------->HSFB2a(2)    <---------YAB1  <XXXXXXXXXXXXXXXXXXXXMIR426  --------->AtMYB61- -DEAR3(1)    <---------ANAC46      <------ZmHOX2a(1)--------->MYB52(1)      --------->ETT(2)    ---- ------->ICU4 <---------LBD16   <---------ANAC46  <---------ANAC46<-----------RAV1(2)<---------CCA1(2)   gattatggatctggtttctgggattagtgatgatgcgaggatgatttttgttgcgtaacgagagattttcaggagtttgtctacaccatctcttttggag  17572500                                         <------MYB83        --------->HSFB2a(2)              <------MYB46(1)      <---------ANAC58        <---------HSFB2a(2)     <----------DOF2     <---------LBD16 ------->ARR11(3)     <---------GLK1(1)  ----------->GT1      <---------ANAC58        <----------DOF2 --------ARR11(3)     --------->GLK1(1) <---------MYB46(3) <----------DOF2            <---------DAG2 -------->CCA1(2)   <------ZmHOX2a(1)   --------->MYB46(2)<---------HSFB2a(1)   --------->ALFIN1 ------->ARR10    <---------TOE2(3)     <---------AtMYB61<---------At4g35610<------ZmHOX2a(1)      *TSS   agatatgtttcgagatgatttaggaaatctctgtcttttggtttggtgattttctctggagctttcgtagccattggaggagatggagctttttcaattg  17572600                                                 <---------ARR14(2)                                                 --------->ARR14(2)      <---------ANAC58           --------->ANAC58                   --------->ANAC46           <---------ANAC46         <--           --------->ANAC58                  <---------LBD16     <---------WOX13(1)               ---        ----------->HVH21                  --------->MYB52(1)   <------------CBF              -------       --------->ANAC58                  <---------ARR11(3)    --------->ATHB12        <------------CBF       --------->ANAC46           <------------CBF        <---------YAB1 <---------ANAC58   <--------       --------->ANAC58       <------ZmHOX2a(1)--------->LBD16<---------AHL20(2)    --------->LBD16      <---------LBD16        ----------->GT1--------->MYB52(1)--------->AHL20(2)   <---------HSFB2a(2)    <---------REM1(2)   >>>>>>>>>TBF1    --------->ARR11(3)  <---------WOX13(1)    --------->HSFB2a(2)   ttgttcttcacggacgcgaagatgaagaagaaggagaattgaagataaccggaatcgagtttgattaattggtttgcgtgccattcccgaattgtccggt  17572700            --------->LBD16                                                                       ---           <---------ANAC58                                                                      ----           <---------MYB46(3)                                                                   -----           <---------ANAC46                                                                    ------           <---------ANAC58                                                                --------->ANAC58          <---------DEAR3(1)                                                               --------->ANAC58     <-----------RAV1(1)                                                                 --------->CCA1(2)   ---------->DOF2                                                                       --------->ARR14(1)  <---------AHL20(2)                                                                    --------->ARR14(2)  <---------ICU4                                                                        --------->ARR11(1) -------AHL20(2)                                                                        <---------ARR14(2) ------>AHL20(2)    ----------->GT1    ------>ZmHOX2a(2)                            ------>ZmHOX2a(2) ---->GT1------>NtERF2   --------->AHL20(2)                                <----------DOF2<-------TEIL -LBD16<---------RAP2.6(2)<---------AHL20(2)                     ---------->DOF2  --------->ARR11(3)   ttaattaatgcggccgtggaaaatgtataaaattggtttgatctatttttcgcaaacagcttgagaagaaagttggactttattgatctagatacgaaaa  17572800                                                  ------>MYB83                                   <---------ARR11(3)                                   --------->ARR11(3)                                  <---------CCA1(2)                                 <---------AHL20(2)                                --------->YAB1    -------->P                             --------->YAB1       ------>MYB46(1)                             <---------ICU4     <---------MYB59                       <-----------HVH21    <<<<<<<<<<<<<<<<<LFY    <---------YAB1  ----------->HVH21                        <---------DEAR3(2) -------->GT1            --------->ICU4     --------->WRKY12                        ------>ZmHOX2a(2) ----->DAG2             <---------MYB59     --------->WRKY38(1)             --------->ZAT18 ---->DAG2    <------NtERF2 --------->ICU4<----------DOF2 <---------WRKY38(1)   ----------->HVH21 ---->DOF2 --------->At4g35610 <---------YAB1<---------WRKY18(1)           --------->ALFIN1   -------   aggtcaatacattggctgcatagggaccttattattatatcttcctttgacctactagggtcgactcaaaaatgaaggtggactgatcggtcccaagtat  17572900                                                    --------->ATHB12                                                   <---------YAB1                                                 <---------At4g35610                                                 --------->At4g35610                                      <---------ALFIN1       --------->MYB52(1)             --------->ANAC46                           --------->MYB52(1)       ------>MYB83<---------WOX13(1) --------->ANAC58 ----------->HVH21 <---------WOX13(1)       <--       ------>MYB46(1)      <------ZmHOX2a(2) <-------TEIL              <---------ARR14(2)      <---- -->AHL20(2)    <---------YAB1        --------->ANAC58<---------WOX13(1)--------->ARR14(2)   <-------   atatagacctatcggtctctgattgtctggatcagtttccacaccagtttcatctgattgacatgtcttaagtagattggccataacgtcttatttcact  17573000                                                                                                    -                                                                                                    -                                                <---------ANAC46                                    -                                                <---------ANAC58                     --------->GLK1(2)                                               <---------STY1(2)                     <---------ARR11(3)                                     ====================================HOX2a_HOX2a --------->ARR14(3)                                     <------ZmHOX2a(2)                               <-----------ARR10                                    <---------ARR11(3)                               <---------ARR14(3)                                    --------->ARR11(3) --------->YAB1                <---------ARR14(2)                                   --------->YAB1      <-----------GT1               --------->ARR11(3)  <---------ARR11(3)              ----------->ARR10 <---------CCA1(2)           ----------->GT1   <--  <---------GLK1(2)               --------->ICU4<---------ANAC58          --------->MYB52(1)   ------  --------->ARR11(3)         --------->ANAC58  --------->STY1(2)       --------->CCA1(2)       ------ -------MYB52(1)             --------->ANAC58 ------>MYB83            --------->ARR11(3)     -------- -----ZAT6                 ---------->DOF2    ------>MYB46(1)         <---------ARR11(3)     -------- ----GT1      <---------ATHB12  ---------->DOF2<---------ZAT2     <------ZmHOX2a(1)  --------->ARR14(2)   gttagattttcttcaaatcacttggaaataaaagcaaagatcatcacctagcttgtatcacaatatgaggaagatataacggtggaaaatcttccacatg  17573100  Previous    Next  AGI:  At1g47750.1    Description:  PEX11A. similar to PEX11B [Arabidopsis thaliana] (TAIR:AT3G47430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61205.1); contains InterPro domain Peroxisomal biogenesis factor 11; (InterPro:IPR008733) Range:  from: 17571696    to: 17572599    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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