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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
At4g35610
--------->
MYB46(3)
<---------
ATHB12
------>
MYB83
-------->
P
--------->
ANAC58
------>
MYB46(1)
--------->
TOE2(3)
--------->
ANAC58
--------->
HSFB2a(1)
--------->
TOE1(3)
------->
GAMYB
--------->
ANAC58
<---------
TOE1(2)
--------->
YAB1
--------->
MYB46(3)
--------->
ANAC58
--------->
TOE2(3)
<---------
MYB52(2)
--------->
At4g35610
---->
ZmHOX2a(1)
------>
ZmHOX2a(1)
--------->
At4g35610
--------->
ANAC58
<-----
------>
TOE2(3)
<---------
ALFIN1
--------->
ANAC58
----------->
RAV1(2)
======
cctcaaatccctaatcttaatcgaaacacttcctacataaccaaccaattcagcccaagcactaatcttctgaagccatttcgaatgtttcgcatcgatc
17572200
--------->
ANAC58
--------->
ANAC58
--------->
ANAC46
--------->
SPL7
<---------
SPL7
<---------
MYB52(1)
--------->
DEAR3(1)
--------->
DOF5.7(2)
<---------
ALFIN1
--------->
TOE2(3)
--------->
AtMYB61
--------->
TOE1(3)
--------->
MYB46(3)
------>
ZmHOX2a(1)
----------->
GT1
------------------>
SPL14
--------->
ICU4
------->
GAMYB
--------->
REM1(1)
<---------
YAB1
--------->
ATHB12
-
ZmHOX2a(2)
<---------
DOF5.7(2)
--------->
ANAC46
------>
ZmHOX2a(1)
--------->
YAB1
<---------
ZAT2
========
HOX2a_HOX2a
<---------
WRKY12
--------->
TOE1(3)
--------->
ICU4
--------->
ZAT2
agtcctgatttcgttaaccatatgaattgttcaacgaaatagtataatccttcaccaccgtacgcgattatgagtaagacgagctcgtgatttgaatccc
17572300
<---------
ANAC46
<---------
ANAC58
<---------
ANAC58
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
HSFB2a(1)
<---------
ARR14(2)
<---------
HSFB2a(1)
<---------
ARR11(3)
--------->
HSFC1(2)
--------->
ARR14(2)
<---------
HSFC1(2)
<------
NtERF2
<---------
ARR14(3)
------->
TEIL
--------->
ATHB12
<-------
--------->
ARR11(3)
<---------------
AtSPL8
--------->
DEAR3(1)
<--------
--------->
ARR14(3)
<---------------
AtSPL3
<----------
DOF2
------>
NtERF2
<--------
<-----------
ARR10
<---------
ANAC46
--------->
ANAC58
----------->
HVH21
<----------
DOF2
--
--------->
GLK1(2)
<---------
ANAC58
--------->
ANAC58
----------->
HVH21
--------->
HSFC1(2)
<------
ZmHOX2a(1)
<---------
ANAC58
--------->
LBD16
<---------
RAP2.6(2)
<---------
HSFC1(2)
atcgtgaggatcttaatgcgttgatgtcttgtacgaattttccgagacggaaggctttgcgactgactccgacgcttgattcgaagcttttgagtcgggg
17572400
<---------
GLK1(2)
------>
ZmHOX2a(2)
--------->
ARR11(3)
====================================
HOX2a_HOX2a
<---------
ARR11(3)
------->
TEIL
<---------
ANAC58
--------->
ARR11(3)
<---------
ANAC55(1)
<---------
ARR14(2)
--------->
ICU4
<---------
ANAC58
<---------
AGP1
<---------
YAB1
--------->
ANAC55(2)
--------->
REM1(1)
--------->
ARR14(2)
--------->
YAB1
<---------
ANAC55(2)
<------
ZmHOX2a(1)
--
<---------
TOE2(3)
<---------
ZAT6
<-----------
RAV1(1)
<---------
LBD16
<----------
DOF2
--
LBD16
<---------
HSFB2a(2)
<---------
YAB1
<---------
RVE1(1)
--------->
ANAC46
<-
-
ANAC46
--------->
HSFB2a(2)
<---------
YAB1
<XXXXXXXXXXXXXXXXXXXX
MIR426
--------->
AtMYB61
-
-
DEAR3(1)
<---------
ANAC46
<------
ZmHOX2a(1)
--------->
MYB52(1)
--------->
ETT(2)
----
------->
ICU4
<---------
LBD16
<---------
ANAC46
<---------
ANAC46
<-----------
RAV1(2)
<---------
CCA1(2)
gattatggatctggtttctgggattagtgatgatgcgaggatgatttttgttgcgtaacgagagattttcaggagtttgtctacaccatctcttttggag
17572500
<------
MYB83
--------->
HSFB2a(2)
<------
MYB46(1)
<---------
ANAC58
<---------
HSFB2a(2)
<----------
DOF2
<---------
LBD16
------->
ARR11(3)
<---------
GLK1(1)
----------->
GT1
<---------
ANAC58
<----------
DOF2
--------
ARR11(3)
--------->
GLK1(1)
<---------
MYB46(3)
<----------
DOF2
<---------
DAG2
-------->
CCA1(2)
<------
ZmHOX2a(1)
--------->
MYB46(2)
<---------
HSFB2a(1)
--------->
ALFIN1
------->
ARR10
<---------
TOE2(3)
<---------
AtMYB61
<---------
At4g35610
<------
ZmHOX2a(1)
*
TSS
agatatgtttcgagatgatttaggaaatctctgtcttttggtttggtgattttctctggagctttcgtagccat
tggaggagatggagctttttcaatt
g
17572600
<---------
ARR14(2)
--------->
ARR14(2)
<---------
ANAC58
--------->
ANAC58
--------->
ANAC46
<---------
ANAC46
<--
--------->
ANAC58
<---------
LBD16
<---------
WOX13(1)
---
----------->
HVH21
--------->
MYB52(1)
<------------
CBF
-------
--------->
ANAC58
<---------
ARR11(3)
--------->
ATHB12
<------------
CBF
--------->
ANAC46
<------------
CBF
<---------
YAB1
<---------
ANAC58
<--------
--------->
ANAC58
<------
ZmHOX2a(1)
--------->
LBD16
<---------
AHL20(2)
--------->
LBD16
<---------
LBD16
----------->
GT1
--------->
MYB52(1)
--------->
AHL20(2)
<---------
HSFB2a(2)
<---------
REM1(2)
>>>>>>>>>
TBF1
--------->
ARR11(3)
<---------
WOX13(1)
--------->
HSFB2a(2)
ttgttcttcacggacgcgaagatgaagaagaaggagaattgaagataaccggaatcgagtttgattaattggtttgcgtgccattcccgaattgtccggt
17572700
--------->
LBD16
---
<---------
ANAC58
----
<---------
MYB46(3)
-----
<---------
ANAC46
------
<---------
ANAC58
--------->
ANAC58
<---------
DEAR3(1)
--------->
ANAC58
<-----------
RAV1(1)
--------->
CCA1(2)
---------->
DOF2
--------->
ARR14(1)
<---------
AHL20(2)
--------->
ARR14(2)
<---------
ICU4
--------->
ARR11(1)
-------
AHL20(2)
<---------
ARR14(2)
------>
AHL20(2)
----------->
GT1
------>
ZmHOX2a(2)
------>
ZmHOX2a(2)
---->
GT1
------>
NtERF2
--------->
AHL20(2)
<----------
DOF2
<-------
TEIL
-
LBD16
<---------
RAP2.6(2)
<---------
AHL20(2)
---------->
DOF2
--------->
ARR11(3)
ttaattaatgcggccgtggaaaatgtataaaattggtttgatctatttttcgcaaacagcttgagaagaaagttggactttattgatctagatacgaaaa
17572800
------>
MYB83
<---------
ARR11(3)
--------->
ARR11(3)
<---------
CCA1(2)
<---------
AHL20(2)
--------->
YAB1
-------->
P
--------->
YAB1
------>
MYB46(1)
<---------
ICU4
<---------
MYB59
<-----------
HVH21
<<<<<<<<<<<<<<<<<
LFY
<---------
YAB1
----------->
HVH21
<---------
DEAR3(2)
-------->
GT1
--------->
ICU4
--------->
WRKY12
------>
ZmHOX2a(2)
----->
DAG2
<---------
MYB59
--------->
WRKY38(1)
--------->
ZAT18
---->
DAG2
<------
NtERF2
--------->
ICU4
<----------
DOF2
<---------
WRKY38(1)
----------->
HVH21
---->
DOF2
--------->
At4g35610
<---------
YAB1
<---------
WRKY18(1)
--------->
ALFIN1
-------
aggtcaatacattggctgcatagggaccttattattatatcttcctttgacctactagggtcgactcaaaaatgaaggtggactgatcggtcccaagtat
17572900
--------->
ATHB12
<---------
YAB1
<---------
At4g35610
--------->
At4g35610
<---------
ALFIN1
--------->
MYB52(1)
--------->
ANAC46
--------->
MYB52(1)
------>
MYB83
<---------
WOX13(1)
--------->
ANAC58
----------->
HVH21
<---------
WOX13(1)
<--
------>
MYB46(1)
<------
ZmHOX2a(2)
<-------
TEIL
<---------
ARR14(2)
<----
-->
AHL20(2)
<---------
YAB1
--------->
ANAC58
<---------
WOX13(1)
--------->
ARR14(2)
<-------
atatagacctatcggtctctgattgtctggatcagtttccacaccagtttcatctgattgacatgtcttaagtagattggccataacgtcttatttcact
17573000
-
-
<---------
ANAC46
-
<---------
ANAC58
--------->
GLK1(2)
<---------
STY1(2)
<---------
ARR11(3)
====================================
HOX2a_HOX2a
--------->
ARR14(3)
<------
ZmHOX2a(2)
<-----------
ARR10
<---------
ARR11(3)
<---------
ARR14(3)
--------->
ARR11(3)
--------->
YAB1
<---------
ARR14(2)
--------->
YAB1
<-----------
GT1
--------->
ARR11(3)
<---------
ARR11(3)
----------->
ARR10
<---------
CCA1(2)
----------->
GT1
<--
<---------
GLK1(2)
--------->
ICU4
<---------
ANAC58
--------->
MYB52(1)
------
--------->
ARR11(3)
--------->
ANAC58
--------->
STY1(2)
--------->
CCA1(2)
------
-------
MYB52(1)
--------->
ANAC58
------>
MYB83
--------->
ARR11(3)
--------
-----
ZAT6
---------->
DOF2
------>
MYB46(1)
<---------
ARR11(3)
--------
----
GT1
<---------
ATHB12
---------->
DOF2
<---------
ZAT2
<------
ZmHOX2a(1)
--------->
ARR14(2)
gttagattttcttcaaatcacttggaaataaaagcaaagatcatcacctagcttgtatcacaatatgaggaagatataacggtggaaaatcttccacatg
17573100
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AGI:
At1g47750.1
Description:
PEX11A. similar to PEX11B [Arabidopsis thaliana] (TAIR:AT3G47430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61205.1); contains InterPro domain Peroxisomal biogenesis factor 11; (InterPro:IPR008733)
Range:
from: 17571696
to: 17572599
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.