Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    <                                                                                                 ----                                                                                                <----                                                                                              -------                                                                                              <------                                                                                              -------                                                                                             <-------                                                                                             <-------           --------->ARR14(2)                                                                --------     <-----------GT1                     --------->YAB1                  <---------YAB1      --------  --------------->AtSPL8                <-------TEIL                    <-----------GT1      -------- --------->At4g35610       ----------->GT1                       ------>ZmHOX2a(1)         --------->YAB1 ---->RVE1(1) <-----------GT1         <---------GLK1(2)   <------ZmHOX2a(1)           <---------ATHB12   atcagttgtaccatatatactacttcaaacagttatatcagattcataaatggagagtgaggaggtcctaaaattatcgttcttccaaatcaaaaattat  17568600                                                                                                  ---                                                                                             --------   <---------YAB1                                                                           <-------- <---------AHL20(2)                                                                        --------->ANAC46 --------->ATHB12                                                                          --------->O2 -------->AHL20(2)                                                                         --------->bZIP60(1) ---------AHL20(2)                                                                         --------->TGA2(1) ----->AHL20(2)                                                                            <---------TGA1a -----YAB1                                                                                 <---------bZIP60(1) ->ATHB1                                                                                   <---------O2 ---ICU4                                      <----------DOF2                              --------->TGA1a -->YAB1                                  <---------GLK1(2)                               <---------- --YAB1<---------ZAT6                   <---------YAB1                                ===============bZIP_DOF --AHL20(2)        <---------ANAC46<---------CCA1(2)                                  ---------->DOF2 ->AHL20(1)  --------->DAG2      <---------ANAC58      --------->DAG2        ---------->DOF2<-------- ->ICU4----------->GT1 ---------->DOF2--------->YAB1  ===============================================bZIP_DOF ->AHL20(2) ---------->DOF2      <---------ANAC58     ---------->DOF2        ========================bZIP_DOF   tatttattagagtaaaaagttgcgctaaaggaatttcttatcttgattcttttacataaagtatgctctgttagaaaaaaaaagaattcaaagacgtcag  17568700                                <------ZmHOX2a(2)                                <---------GLK1(1)                                <<<<<<<<<GATA-1                                <<<<<<<<<GATA-2                    <---------ICU4                    --------->YAB1                    --------->MYB52(1)       --------->KAN4(2)        <<<<<<<<<GATA-4     --------->AHL20(1)         <<<<<<<<<GATA-3                                    ----------->GT1     <---------ARR11(3)        <---------AGP1                               --------->ANAC58     <---------AHL20(1)        <---------ARR11(3)                           <---------ANAC55(2) --------->YAB1    <---------ATHB51      <---------ATHB12                 --------->CCA1(2) ------>GLK1(1)    <---------AHL20(2)   --------->ANAC46   --------->TOE2(3)--------->ANAC46 ->TGA2(2)        --------->AHL20(1)   --------->WOX13(1)------>MYB46(1) --------->ARR14(2) ---HVH21        --------->YAB1--------->ARR11(3)        ------>MYB83 --------->AHL20(2) -------------TaNAC69(2)      <---------CCA1(2)         ----------->RAV1(1) --------->ANAC58 ---TGA1       --------->AHL20(2)------>ZmHOX2a(2)    --------->MYB46(3) <---------ARR14(2)     <----   aaatcaaaatattcccaaaaaataatggttttagatctctccaatcaactaattgaaccaacatcaaaattttaaaatacgcgaatagtatatcaatgct  17568800           --------->YAB1       <---------ARR11(3)       --------->ARR11(3)      <---------GLK1(2)                                   <-----------GT1   --------->YAB1                             --------->ARR14(2)             --------->YAB1    ------ -----ANAC46          --------->ARR14(2)      <---------ARR14(2) ------------>CBF            <-------   gtgtatcaaaatctcataatccaaaatactctatccaaactcgaagagaatacacccatataaccatatcaatagagaataatacaaaaactgatttaaa  17568900                            ------>MYB46(1)                                                         -                            ------>MYB83                                                           --                          --------->AtMYB61                                                       ---                          ------->GAMYB            *TSS                                           ---                         --------->MYB46(3)<---------------AtSPL3      --------->AHL20(2)     -------  <-----------TBP      <-----------GT1     <---------------AtSPL8   ----------->GT1           ------- ---->DOF2          --------->YAB1     <----------DOF2             ----------->GT1            ------- --AHL20(2)    ------------>CBF  ---------->DOF2 <---------ZAT6  --------->CCA1(2)            -------   agcgttttgtagcgaaacacaattttaaccatcccaaaagcctttttggtactgttaccagagtaagagacgataaaatacaaacaaaaacaaaacatgc  17569000         --------->AHL20(2)     --------->AHL20(2) ------>GAMYB ------->MYB46(3) ------>ANAC58 ------>ANAC58 -->AtLEC2              ---------->DOF2 -->ANAC46          <----------ID1                                         <----------DOF2 -->ANAC58   ---------->DOF2            ---------->DOF2         <----------DOF2 -->ANAC58--------->AHL20(2)       ----------->GT1--------->ZAT18   <-----------GT1       <---------ALFIN1   aaccaaaaaaaataaaaaagaagagacaaaggggagagagagaaaagaagagcgaacaaattccttctttttcccctctttctctctctctcccactctc  17569100                                                                                      --------->At5g28300                                                                              <---------MYB46(3)                                                                             --------->ALFIN1                                                         --------->AtLEC2   <---------MYB52(1)                          <---------ICU4             --------->ARR11(3)    <---------At4g35610              <---------YAB1 <-----------GT1         --------->GLK1(2)     <---------ZAT2      <<<<<<<<<TBF1<-----------GT1          ----------->RAV1(1)          <-----------RAV1(2)   tcatcttcttcttcttatgattttcaacttattacaacaacaacaacaacaaaataatcttgcaaagtttcagtctcaggtggttcacagttaatgctac  17569200                          <---------TOE1(2)               <-----------------AGL1         ------->TEIL     <---------TOE2(2)              <---------ANAC46      <---------YAB1     <---------MYB52(1)              <------MYB46(1)    --------->YAB1     <---------ANAC58                  <------MYB83        <---------ARR11(3)    <---------ICU4     <---------ANAC55(2) --------->HSFB2a(2)               --------->ARR11(3)   --------->ICU4      <---------ANAC46    <---------HSFB2a(2)         <-----------GT1   <---------ATHB12    <---------ANAC58  --------->At4g35610        <---------ICU4      <-------TEIL   ttgcaatgatgaatccatcccaatttcgtaagttaatcttctcttctgaaaattgaatttggtgtatcaattcttacattatcttgaagattcatctctg  17569300                                         <------NtERF2                                        --------->LBD16                ---------->DOF2                                       --------->ETT(1)       <------ZmHOX2a(2)                                       <---------ANAC46      <---------ARR14(3)                                      <---------LBD16        --------->ARR11(3)                                     --------->MYB52(1)      --------->ARR14(3)                  ----                                  <---------GLK1(1)          <---------ARR14(2)                  <---                                  --------->GLK1(1)          --------->ARR14(2)                 -----                                 <---------ARR14(2)          <---------ARR11(3)                 <----                                 --------->ARR14(2)          --------->AGP1                    <-----             <---------LBD16  --------->ETT(1)   ----------->GT1<----------DOF2        <---------ICU4         <---------AHL20(2)  ---------->ID1     ----------->GT1------>ZmHOX2a(2)   <---------AHL20(2)   aatttctcaaatttatgggggttttttgtttgtcggaattgccggagaaattggaaaaaacgagatctttgagtaaagggtttgtttaatctttagtctt  17569400                             <---------HSFB2a(2)                             --------->HSFB2a(2)                            ------>ZmHOX2a(2)                           --------->CCA1(2)                           <------ZmHOX2a(2)                          <---------ARR11(3)                          --------->ARR14(2)                          --------->ARR11(3)                          <---------ARR14(2)        ==========================HOX2a_HOX2a        ===========================HOX2a_HOX2a        ------>ZmHOX2a(1) <---------ARR14(3)       --------->TOE1(3)  --------->AGP1       --------->TOE2(3)  <---------AGP1   <----------DOF2        --------->ARR14(3)  <---------ANAC58       <---------CCA1(2)  <---------ANAC58      ----------->ARR10 ----->ATHB12     <---------ICU4 ------ICU4   <---------------AGL15                     ------>MYB83 ---->ICU4    --------------->AGL15                     ------>MYB46(1) -----YAB1   <-----------------AGL2                   <---------MYB59------>ZmHOX2a(1)              - -----DOF2  <---------At4g35610               <<<<<<<ZML2 <---------ATHB12                          -   tattgctttccttaagctaattttggcagatctggaacataaaccctagaacaagaccaaatcagtgtctccttactcttagggattttagtctctgtga  17569500  Previous    Next  AGI:  At1g47740.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61202.1); contains InterPro domain Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580) Range:  from: 17568951    to: 17571737    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version