Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------AHL20(2)                                 --------->ICU4                            ----------->GT1                                         <---------ICU4                          ---------->DOF2                                     <----------DOF2  ------                       --------->ANAC58                                    --------->ZAT6 <----------                       --------->ANAC58          ------>ZmHOX2a(1)       <-----------GT1  ----------- --------->GT1       ---------->DOF2            --------->TOE2(3)     <----------DOF2     --------->ZAT6   gttgtaaaattgtcttcaagtttaaaagcaaagtaataaatgttctatttcctaaaactctctctcaaaacactttaacactttcttcattacctctaaa  17204600                                ---------->DOF2                                                 -----                               --------->AHL20(2)               <---------MYB46(3)    --------->ICU4                  --------->AHL20(2)                    <--------ATHB1              --------->YAB1 --                  <---------AHL20(2)                    --------->ATHB51           <---------AHL20(2)      --------->ZAT6           <---------AHL20(2)       <---------ICU4          <---------AHL20(1) <-    <-----------GT1   <-----------GT1                  <---------ATHB12         --------->AHL20(1)--- ---->DOF2       --------->AHL20(2)                    <---------ATHB51        --------->AHL20(2)---- -----AGL15      <---------AHL20(2)                    --------->ICU4   ----------->GT1--------->ATHB12 ---->AGL15      <---------AHL20(1)                  --------->YAB1  <---------ANAC46 <---------YAB1   agaattttactctaaacaatttttttactcaaattaaagacttgtttttgctcaacaataattcagaggttgagtagaaaaatatataatgatttacaaa  17204700                                                                     <---------LBD16                                                                     --------->LBD16                                                                    <---------LBD16                                                                    --------->TOE1(2)                                                                  <------ZmHOX2a(2)                                                                  --------->CCA1(2) <---------HSFC1(1)                                                                 --------->ARR11(3) --------->HSFB2a(2)                                                                 --------->ARR14(2) <---------HSFB2a(2) ----->DOF2                                                      --------->AGP1  --------->GLK1(2) --------->GT1      <---------ANAC58                             <---------ARR14(2) --------->HSFC1(1) ---------ID1       <---------ANAC58                             <---------ARR11(3)<---------LBD16 -------->GT1     <---------YAB1                       --------->CCA1(2)     <---------TOE2(3) ----->DAG2      <---------ARR11(3)                   --------->ARR11(3)    ---------->DOF2    <-----   aaggaaaaacaaaacacaagatgcttgatgcttcagtttaagtgaaaatggtataagatttgtgtaagatccagggattaaagtttctggaaactcttga  17204800                                                      --------->HSFC1(2)                                                      <---------HSFC1(2)                                      <----------DOF2 <---------HSFB2a(1)                                      <---------DAG2  --------->HSFB2a(1)                                 <---------ANAC58    <---------TOE1(2)                                 <---------ANAC58    <---------TOE2(2)                            --------->ZAT2       <---------HSFB2a(2)                            <---------ZAT2 ---------->ID1                            <---------STY1(2)    --------->HSFB2a(2)                            --------->STY1(2) <---------DAG2                          ----------->GT1                 <---------At4g35610 <---------ANAC58<---------TOE1(3)        ---------->DOF2             <-------GAMYB ------>MYB46(1) <-----------GT1                 ------->GAMYB            ----------->GT1------>MYB83   <-----------GT1                ------>MYB46(1)            -            <---------MYB46(3)<---------ZAT18 <----------DOF2            ------>MYB83 --------->LBD16 ----WRKY18(1)   --------->At4g35610 <---------ANAC58<---------TOE2(3)   -------->P <---------LBD16 -   ccaatatagctagatggttagatgaaacctagctcgcttgcttttttccttttcgaaggttgcaagaaggaatccaacccaatagctccggttaaatcag  17204900                                                     --------->CCA1(2)                                                    --------->ARR11(3)                                                    <---------AHL20(1)                                             ----------->GT1                                            --------->LBD16                                          --------->ATERF1(1)                                          <---------LBD16                                         --------->ZAT2                                         <---------ZAT2                                         ------>NtERF2                                         <---------At4g35610           --------->ZAT18             <-----------RAV1(2)                                        ---           --------->ZAT14            <---------At4g35610                                 --------->ANAC58           <---------ZAT14            --------->At4g35610                                 --------->ANAC58           <---------ZAT18         --------->At4g35610              <----------DOF2  ----------->HVH21 -------->ANAC58           --------->RAP2.6(2)      <---------AHL20(2)      <---------ARR11(3)   <--- -------->ANAC58   <-------TEIL ---------->DOF2<--------P   <-------TEIL    --------->ARR11(3)   ----   ccaagacagccagtgcaccgattcatagaccgccaaaagctgcagccgggttaatatatgggttcagttccttttgaaggtctctaggtgacaagacaat  17205000                                                                             <---------CCA1(1)                                                                  <---------AHL20(2)                                                                 <---------ARR11(3)       <---------AHL20(2)                                        --------->ARR11(3)       --------->AHL20(2)                  <---------DAG2        <---------AHL20(1)     *TSS                                  <----------DOF2    --------->YAB1 <---------RVE1(1) --------->At4g35610                    --------->ZAT6       <---------YAB1 <---------ARR14(2) ------>RAP2.6(3)                     <-----------GT1<------------CBF       --------->ARR11(3) ------ARR14(2)              <-----------GT1       <---------ARR14(2)       <---------ARR11(3) ----->ARR14(2)       <-------TEIL <----------DOF2 --------->ICU4--------->AHL20(1)   atcggctaaaaaaatgtctctaaattcatattaactgctttaacacttttgcaaatattgtttatgatatatttagaagatattttctctgatatatgtt  17205100                  <-------PIF4                  <-------MYC3                  ------->MYC4                  <-------PIF5                  ------->MYC3                  ------->PIF4                  ------->PIF5                  <-------MYC2        --------->DAG2               <---------ANAC58      --------->DAG2                        --------->YAB1               <---------ANAC58     ---------->DOF2                 --------->REM1(1)              <-------TEIL      --------->At4g35610          --------->STY1(2)       --------->KAN4(2)  ----------->GT1 ------->MYC2--------->YAB1                 <---------STY1(2)   --------->YAB1   caactagtaaaataagtgcatgtgcaaaactatcagcaaaaaggtatgttttaaaaagtttctagctactacatctatagtaatggtcattccaccttca  17205200                                                            <------MYB83                                                            <------MYB46(1)                                                           --------->MYB46(2)                                                           <---------AtMYB61                                                           <---------DEAR3(1)                                                           <---------MYB46(3)                                                           --------->MYB111(1)                                                           --------->MYB111(2)                                                    ------>MYB46(1)                                                    ------>MYB83                                                    -------->P<---------ZAT6                                                 <---------MYB55(2)                                                 --------->MYB46(3)                                                 <---------MYB52(2)                                    --------->CCA1(1)     <--------P           <----------CDC5      --------->AHL20(2)------->GAMYB    --------->ALFIN1       ----------->GT1      --------->ANAC46  <---------ANAC46       ---------->DOF2        --------->ANAC58           --------->WOX13(1)  <---------ANAC58  <---------WOX13(1)          --------->ANAC58  --------->MYB59  <---------ANAC58--------->ATHB12  --------->RVE1(1)     <---------MYB55(1)    ----------->GT1    <-   aatggagtgtctcgctgagttgattgacaaagaaaaaaatatccaactacaaccaactaggttggtgttaggcatatcaatcgagttaatatgtgtttga  17205300                 <------NtERF2                --------->ANAC58                --------->ANAC58                --------->ANAC46               <---------LBD16               --------->ZAT18          ---------->DOF2                       <---------MYB52(1)      ------>NtERF2                            --------->LBD16    <---------RAP2.6(2)                       ----------->GT1               <---------GLK1(2)   --------->SPL7--------->LBD16              <---------ANAC46            --------->ICU4           <-   <---------LBD16                            <---------ANAC55(2)     <---------AHL20(2)       <----- --------------AtSPL3                      <---------MYB52(1)      ------->TEIL     <---------ALFIN1   gttagtccggcccaaagcccgcaaaactcacatatgtctgagtccggtccgtaaatttctgagcctatgtattttaaagattagccccgctctagcagga  17205400                                       <---------------AGL15                                      ----------------->AG                                      ----------------->AGL1                                      ----------------->AGL3                                      <-----------------AGL2                                      ----------------->AGL2                           <-------TEIL                                   <----------DOF2                       --------->AHL20(2)                                <-----------GT1                         <---------ATHB12               <---------ZAT14  ---------->ID1                   --------->ANAC58   ----------->GT1 --------REM1(2)     --------->MYB52(1)--------------->AGL15   ---------->DOF2     --------->ALFIN1 -ZmHOX2a(1)<---------ZAT6     <-----------GT1    ---------->DOF2--------->ANAC58  <---------------AtSPL8   ctacaaggtttttagagtgaagttaacagtttttttcctttccatatggagcaaaaggaagcttgaaaagccaaatgaattacaagtggtacataccttg  17205500  Previous    Next  AGI:  At1g46048.1    Description:  pseudogene, hypothetical protein Range:  from: 17204815    to: 17205005    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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