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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
AHL20(2)
--------->
ICU4
----------->
GT1
<---------
ICU4
---------->
DOF2
<----------
DOF2
------
--------->
ANAC58
--------->
ZAT6
<----------
--------->
ANAC58
------>
ZmHOX2a(1)
<-----------
GT1
-----------
--------->
GT1
---------->
DOF2
--------->
TOE2(3)
<----------
DOF2
--------->
ZAT6
gttgtaaaattgtcttcaagtttaaaagcaaagtaataaatgttctatttcctaaaactctctctcaaaacactttaacactttcttcattacctctaaa
17204600
---------->
DOF2
-----
--------->
AHL20(2)
<---------
MYB46(3)
--------->
ICU4
--------->
AHL20(2)
<--------
ATHB1
--------->
YAB1
--
<---------
AHL20(2)
--------->
ATHB51
<---------
AHL20(2)
--------->
ZAT6
<---------
AHL20(2)
<---------
ICU4
<---------
AHL20(1)
<-
<-----------
GT1
<-----------
GT1
<---------
ATHB12
--------->
AHL20(1)
---
---->
DOF2
--------->
AHL20(2)
<---------
ATHB51
--------->
AHL20(2)
----
-----
AGL15
<---------
AHL20(2)
--------->
ICU4
----------->
GT1
--------->
ATHB12
---->
AGL15
<---------
AHL20(1)
--------->
YAB1
<---------
ANAC46
<---------
YAB1
agaattttactctaaacaatttttttactcaaattaaagacttgtttttgctcaacaataattcagaggttgagtagaaaaatatataatgatttacaaa
17204700
<---------
LBD16
--------->
LBD16
<---------
LBD16
--------->
TOE1(2)
<------
ZmHOX2a(2)
--------->
CCA1(2)
<---------
HSFC1(1)
--------->
ARR11(3)
--------->
HSFB2a(2)
--------->
ARR14(2)
<---------
HSFB2a(2)
----->
DOF2
--------->
AGP1
--------->
GLK1(2)
--------->
GT1
<---------
ANAC58
<---------
ARR14(2)
--------->
HSFC1(1)
---------
ID1
<---------
ANAC58
<---------
ARR11(3)
<---------
LBD16
-------->
GT1
<---------
YAB1
--------->
CCA1(2)
<---------
TOE2(3)
----->
DAG2
<---------
ARR11(3)
--------->
ARR11(3)
---------->
DOF2
<-----
aaggaaaaacaaaacacaagatgcttgatgcttcagtttaagtgaaaatggtataagatttgtgtaagatccagggattaaagtttctggaaactcttga
17204800
--------->
HSFC1(2)
<---------
HSFC1(2)
<----------
DOF2
<---------
HSFB2a(1)
<---------
DAG2
--------->
HSFB2a(1)
<---------
ANAC58
<---------
TOE1(2)
<---------
ANAC58
<---------
TOE2(2)
--------->
ZAT2
<---------
HSFB2a(2)
<---------
ZAT2
---------->
ID1
<---------
STY1(2)
--------->
HSFB2a(2)
--------->
STY1(2)
<---------
DAG2
----------->
GT1
<---------
At4g35610
<---------
ANAC58
<---------
TOE1(3)
---------->
DOF2
<-------
GAMYB
------>
MYB46(1)
<-----------
GT1
------->
GAMYB
----------->
GT1
------>
MYB83
<-----------
GT1
------>
MYB46(1)
-
<---------
MYB46(3)
<---------
ZAT18
<----------
DOF2
------>
MYB83
--------->
LBD16
----
WRKY18(1)
--------->
At4g35610
<---------
ANAC58
<---------
TOE2(3)
-------->
P
<---------
LBD16
-
ccaatatagctaga
tggttagatgaaacctagctcgcttgcttttttccttttcgaaggttgcaagaaggaatccaacccaatagctccggttaaatcag
17204900
--------->
CCA1(2)
--------->
ARR11(3)
<---------
AHL20(1)
----------->
GT1
--------->
LBD16
--------->
ATERF1(1)
<---------
LBD16
--------->
ZAT2
<---------
ZAT2
------>
NtERF2
<---------
At4g35610
--------->
ZAT18
<-----------
RAV1(2)
---
--------->
ZAT14
<---------
At4g35610
--------->
ANAC58
<---------
ZAT14
--------->
At4g35610
--------->
ANAC58
<---------
ZAT18
--------->
At4g35610
<----------
DOF2
----------->
HVH21
-------->
ANAC58
--------->
RAP2.6(2)
<---------
AHL20(2)
<---------
ARR11(3)
<---
-------->
ANAC58
<-------
TEIL
---------->
DOF2
<--------
P
<-------
TEIL
--------->
ARR11(3)
----
ccaagacagccagtgcaccgattcatagaccgccaaaagctgcagccgggttaatatatgggttcagttccttttgaaggtctctaggtgacaagacaat
17205000
<---------
CCA1(1)
<---------
AHL20(2)
<---------
ARR11(3)
<---------
AHL20(2)
--------->
ARR11(3)
--------->
AHL20(2)
<---------
DAG2
<---------
AHL20(1)
*
TSS
<----------
DOF2
--------->
YAB1
<---------
RVE1(1)
--------->
At4g35610
--------->
ZAT6
<---------
YAB1
<---------
ARR14(2)
------>
RAP2.6(3)
<-----------
GT1
<------------
CBF
--------->
ARR11(3)
------
ARR14(2)
<-----------
GT1
<---------
ARR14(2)
<---------
ARR11(3)
----->
ARR14(2)
<-------
TEIL
<----------
DOF2
--------->
ICU4
--------->
AHL20(1)
atcgg
ctaaaaaaatgtctctaaattcatattaactgctttaacacttttgcaaatattgtttatgatatatttagaagatattttctctgatatatgtt
17205100
<-------
PIF4
<-------
MYC3
------->
MYC4
<-------
PIF5
------->
MYC3
------->
PIF4
------->
PIF5
<-------
MYC2
--------->
DAG2
<---------
ANAC58
--------->
DAG2
--------->
YAB1
<---------
ANAC58
---------->
DOF2
--------->
REM1(1)
<-------
TEIL
--------->
At4g35610
--------->
STY1(2)
--------->
KAN4(2)
----------->
GT1
------->
MYC2
--------->
YAB1
<---------
STY1(2)
--------->
YAB1
caactagtaaaataagtgcatgtgcaaaactatcagcaaaaaggtatgttttaaaaagtttctagctactacatctatagtaatggtcattccaccttca
17205200
<------
MYB83
<------
MYB46(1)
--------->
MYB46(2)
<---------
AtMYB61
<---------
DEAR3(1)
<---------
MYB46(3)
--------->
MYB111(1)
--------->
MYB111(2)
------>
MYB46(1)
------>
MYB83
-------->
P
<---------
ZAT6
<---------
MYB55(2)
--------->
MYB46(3)
<---------
MYB52(2)
--------->
CCA1(1)
<--------
P
<----------
CDC5
--------->
AHL20(2)
------->
GAMYB
--------->
ALFIN1
----------->
GT1
--------->
ANAC46
<---------
ANAC46
---------->
DOF2
--------->
ANAC58
--------->
WOX13(1)
<---------
ANAC58
<---------
WOX13(1)
--------->
ANAC58
--------->
MYB59
<---------
ANAC58
--------->
ATHB12
--------->
RVE1(1)
<---------
MYB55(1)
----------->
GT1
<-
aatggagtgtctcgctgagttgattgacaaagaaaaaaatatccaactacaaccaactaggttggtgttaggcatatcaatcgagttaatatgtgtttga
17205300
<------
NtERF2
--------->
ANAC58
--------->
ANAC58
--------->
ANAC46
<---------
LBD16
--------->
ZAT18
---------->
DOF2
<---------
MYB52(1)
------>
NtERF2
--------->
LBD16
<---------
RAP2.6(2)
----------->
GT1
<---------
GLK1(2)
--------->
SPL7
--------->
LBD16
<---------
ANAC46
--------->
ICU4
<-
<---------
LBD16
<---------
ANAC55(2)
<---------
AHL20(2)
<-----
--------------
AtSPL3
<---------
MYB52(1)
------->
TEIL
<---------
ALFIN1
gttagtccggcccaaagcccgcaaaactcacatatgtctgagtccggtccgtaaatttctgagcctatgtattttaaagattagccccgctctagcagga
17205400
<---------------
AGL15
----------------->
AG
----------------->
AGL1
----------------->
AGL3
<-----------------
AGL2
----------------->
AGL2
<-------
TEIL
<----------
DOF2
--------->
AHL20(2)
<-----------
GT1
<---------
ATHB12
<---------
ZAT14
---------->
ID1
--------->
ANAC58
----------->
GT1
--------
REM1(2)
--------->
MYB52(1)
--------------->
AGL15
---------->
DOF2
--------->
ALFIN1
-
ZmHOX2a(1)
<---------
ZAT6
<-----------
GT1
---------->
DOF2
--------->
ANAC58
<---------------
AtSPL8
ctacaaggtttttagagtgaagttaacagtttttttcctttccatatggagcaaaaggaagcttgaaaagccaaatgaattacaagtggtacataccttg
17205500
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AGI:
At1g46048.1
Description:
pseudogene, hypothetical protein
Range:
from: 17204815
to: 17205005
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.