Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <------MYB83                  --------->YAB1                                         <------MYB46(1)                 <---------ATHB12                                      <---------WOX13(1)        <---       ------>ZmHOX2a(1)                          ------->TEIL       --------->ATHB12            ----      --------->TOE2(3)                   ---------->DOF2          <---------WOX13(1)            ---- ---------YAB1 --------->WOX13(1) --------->REM1(1)             <---------YAB1     <---------DOF5.7(2)   ttctaattcctaaaaatcaatcacatcaaaactgctacaatttctaaagatgaatcgatttcaagtctcattgattggtttgagtaaacgattcgaaaac  11641500                                                                                      ----------->RAV1(1)                                                                                      ------->GAMYB                                                                                     --------->ANAC58                                                                                     --------->ANAC46                                                                                     --------->ANAC58                                                          <<<<<<<<<SARD1           --------->MYB52(1)                                              <---------HSFC1(1)                  --------->TOE1(2)                                              --------->HSFB2a(2)                --------->MYB46(3)                                              <---------HSFB2a(2)              <---------ARR14(2)                               --------->ANAC58           <<<<<<<<<CBP60g      --------->ARR14(2)           <XXXXXXXXXXXXXXXXXXXXMIR869.2   --------->GLK1(2)                  <---------CCA1(2)      --------->ARR14(2)       --------->ANAC58          ------>MYB83       <---------ANAC58      <---------ARR14(2)       --------->ANAC46--------->LBD16              --------->ANAC55(2) ------MYB59            ------->GAMYB  <-----------------AGL1               <---------ANAC58 ----->TOE1(3)       ----------->RAV1(1)<---------------AGL15               <---------ANAC46        < ----->TOE2(3)      --------->MYB46(3) <-----------GT1   ------>MYB46(1)    <---------ANAC55(2)  ----   ctaaaccgaatcagcaatttcaacaacagagcgacgcaatttcacattctggaaaaaccaaatttctcaaatgcgatttcgtatccaacgacatatttat  11641600                                                                                      ------>ZmHOX2a(2)                                                                                    <---------ARR14(2)                                                                                    <---------AGP1                                                                                    --------->ARR11(3)                                                                                    <---------ARR11(3)                                                                                    --------->ARR14(2)                                                                           --------->DEAR3(1)                                                                           ----------->HVH21                                                          <---------HSFC1(2) <------NtERF2            ------>ZmHOX2a(2)                   <---------ARR14(2)        --------->DEAR3(2)          <---------ARR11(3)                <---------LBD16   <---------ANAC46     <---------CCA1(2)          --------->ARR11(3)               --------->MYB52(1)<---------LBD16------>NtERF2 --------->GLK1(2)                    --------->ARR11(3)  --------->HSFC1(2)<---------ATERF1(1) ---------GLK1(2)          --------->MYB52(1)   <---------GLK1(2)       --------->ANAC58 ----->YAB1<------ZmHOX2a(2) --------->MYB46(3) --------->ARR14(2)      --------->ANAC58   cagaatcgaaacgatctcgattagaaatctaaccgatgaagaaattgacggattttgggatgtttcggagtaacaagccgacgctggatcttcagagcga  11641700                                                                               <<<<<<<<<TBF1                                                                            <<<<<<<<<TBF1                                                                         <<<<<<<<<TBF1                                                                      <<<<<<<<<TBF1  <<<<<<<<<TBF1                                        <---------ZAT6              <------------------------ANAC81                                     ------>ZmHOX2a(1)           <------------------------ANAC81    <                             --------->At4g35610                 <----------DOF2  <<<<<<<<<TBF1------                             <---------At4g35610               <------------------------ANAC81<------   gcctataagtccgtctcagtcccaagaagtaagctgttcctagagttatctcccaaaacaccatcttctttcttcttcttcttcttcttcttcggctaca  11641800                                                <---------DOF5.7(2)                                               <---------WRKY38(1)                                            <------MYB83                                    <----------DOF2  --------->ALFIN1                                   <---------DAG2  *TSS          <---------ALFIN1                       <---------MYB52(1) <---------ANAC46   <------ZmHOX2a(2)         --------->ATHB12 <-----------HVH21 <------MYB46(1) --------->ARR14(2)       <---------TOE1(2) --------->WOX13(1) <---------MYB46(3)  ------>ZmHOX2a(1) ---------YAB1        <-----------TGA1    <---------ANAC58  <---------ARR14(2)<---------ANAC58      - --->REM1(1)          <-----------HVH21   <---------ANAC58----------->ARR10   <---------ANAC58  <---- ---REM1(2) ------>ZmHOX2a(2)  ----------->HVH21--------->MYB52(1)  --------->DEAR3(1)        <------   cgattatcgcatgatcgccattttcgtcagtcactgaccttttggctggttaacggtgatgcgatcctcaccgtctatttccttgttcgaagaagtcatt  11641900                   --------->DOF5.7(2)                  <---------DAG2              <---------ZAT18         <---------MYB52(1)        <-------GAMYB<---------DOF5.7(2)       <---------DEAR3(2)       --------->MYB55(2)       <-----------RAV1(1)       --------->MYB52(2)       <---------MYB46(3)                      <---------MYB52(1)     <---------MYB52(1)         --------->CCA1(2)                                   <----------DOF2    <---------RAP2.6(3) ------->GAMYB      <---------MYB52(1)                     <---------YAB1 <---------PCF2   <----------DOF2 --------->CCA1(2)                              <---------AHL20(1) ---------->TCP11(1) --------->MYB52(1)   <---------RAP2.6(3)   ---------->DOF2  --------->ARR11(3) -------RAV1(1)<---------ALFIN1--------->ARR11(3)       <---------ICU4           <---------ARR11(3) ------CBF  --------->PCF2     <---------ARR11(3)    --------->YAB1         <---------ATHB12  <------   gtgggccgtctgttggcccactttaacggagtagatatatgggccgtctgttttttcataattttgtaaagtttcccaaacaatatctttgttttgatga  11642000                                                           <---------AHL20(2)                                                           --------->AHL20(2)                                                           --------->AHL20(1)                                                       --------->AHL20(1)                                                       <---------AHL20(2)                                                       <---------AHL20(1)                                                       --------->AHL20(2)                                                      <---------AHL20(2)                                                      --------->AHL20(2)                                                   --------->ATHB51                                                   --------->YAB1                                                   <--------HAHB4                                                   <--------ATHB1          --------->ARR11(3)                                                   <---------ICU4          <---------ARR11(3)                                                   -------->HAHB4  <---------ICU4                                                  --------->AHL20(2)       <---------GLK1(2)                                                  <---------YAB1   --------->YAB1         --------->AHL20(2)                                                  --------->ICU4--------->YAB1        --------->AHL20(2)   <---------DAG2                                 <---------ATHB51--------->ICU4   <---------HSFB2a(2)   <----------DOF2       ----------->GT1     --------->YAB1<---------AHL20(1)      --------->HSFB2a(2) ---YAB1       ----------->GT1  --------->YAB1  --------->YAB1<---------YAB1<---------RVE1(1)   tacaactttattttgtgaagaaaaatgtagaaaatcataaactaataacataataattaaatttattaataatcacagattttttctataaattaactca  11642100                                <---------AHL20(1)                                --------->AHL20(2)                                --------->AHL20(1)                                <---------AHL20(2)                               --------->AHL20(2)                               <---------AHL20(2)                            --------->ATHB51                            --------->YAB1                            <--------HAHB4                            <---------ICU4                            <--------ATHB1                           --------->ICU4                           <---------ATHB51                           <---------YAB1                           --------->AHL20(2)                         --------->YAB1                     <---------TOE2(3)   <---------AHL20(2)               --------->AHL20(1)        --------->AHL20(2)               --------->AHL20(2)    --------->AHL20(2)               <---------AHL20(1)    <---------AHL20(2)               <---------AHL20(2)   <---------AHL20(1)                                            <--         --------->ANAC55(2)-------->HAHB4                        ---------->DOF2            <-------       <-----------GT1--------->YAB1--------->AHL20(1)         --------->YAB1         --------->AHL20(2) --------->AHL20(2)  <---------YAB1 --------->AHL20(2)      --------->YAB1  ---------->DOF2  -------- <---------AHL20(2) <-----------GT1 <---------AHL20(2)     <---------YAB1 <---------YAB1 ---------->DOF2   aatttaaatttacataataaattaacataataattaaatttatttaaatgtttctaatattctaataacaaagcttatgaaagtctcattaaaaagatag  11642200                                                                                <------ZmHOX2a(2)                                                                                =====================                                                                               <---------ARR11(3)                                               --------->ANAC58            ---------->DOF2  ----------->GT1                              --------->ANAC46     --------->TOE2(3)  <---------ZAT6                               --------->ANAC58     <---------MYB59           ------- -------ZAT14                                  <---------ANAC55(2)  --------->TOE1(3)   --------->YAB1 --ARR11(3)          <---------MYB46(3)       <---------LBD16 --------->YAB1   --------->ARR11(3) <-- ->ARR11(3)   <---------AtLEC2       <------ZmHOX2a(1)  <---------TOE2(3) --------->AHL20(2)  -------   tccagagttaaaatttacatggattgttggaactaataaggagataactacggaaactaatgaaacataacctaaataaaagatcaacacttataatcta  11642300                                                                                                    <                             <-----------GT1                                                       --                            <---------AHL20(2)                                                 <-----         <-----------GT1    --------->AHL20(2)                                      --------->MYB52(1) ====HOX2a_HOX2a        --------->AHL20(2)             <---------AHL20(2)          <---------WRKY12<- -->TOE2(2)             <---------AHL20(2)    <---------MYB46(3)              --------->At4g35610  <- ----ZmHOX2a(1)  --------->TOE2(2)            --------->MYB52(2)         --------->DAG2   <---------ZAT6 -->TOE1(2)      --------->TOE1(2)          <---------MYB52(1)          ---------->DOF2   -----------   ggagaataatttttcaaaacataagattaattaactaaatcaaaccgttcgtttgattttttttttcacttgaaaaaagcagaggccaacgagtgttata  11642400  Previous    Next  AGI:  At1g32260.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G35480.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63339.1) Range:  from: 11640561    to: 11641851    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version