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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<------
MYB83
--------->
YAB1
<------
MYB46(1)
<---------
ATHB12
<---------
WOX13(1)
<---
------>
ZmHOX2a(1)
------->
TEIL
--------->
ATHB12
----
--------->
TOE2(3)
---------->
DOF2
<---------
WOX13(1)
----
---------
YAB1
--------->
WOX13(1)
--------->
REM1(1)
<---------
YAB1
<---------
DOF5.7(2)
ttctaattcctaaaaatcaatcacatcaaaactgctacaatttctaaagatgaatcgatttcaagtctcattgattggtttgagtaaacgattcgaaaac
11641500
----------->
RAV1(1)
------->
GAMYB
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
<<<<<<<<<
SARD1
--------->
MYB52(1)
<---------
HSFC1(1)
--------->
TOE1(2)
--------->
HSFB2a(2)
--------->
MYB46(3)
<---------
HSFB2a(2)
<---------
ARR14(2)
--------->
ANAC58
<<<<<<<<<
CBP60g
--------->
ARR14(2)
<XXXXXXXXXXXXXXXXXXXX
MIR869.2
--------->
GLK1(2)
<---------
CCA1(2)
--------->
ARR14(2)
--------->
ANAC58
------>
MYB83
<---------
ANAC58
<---------
ARR14(2)
--------->
ANAC46
--------->
LBD16
--------->
ANAC55(2)
------
MYB59
------->
GAMYB
<-----------------
AGL1
<---------
ANAC58
----->
TOE1(3)
----------->
RAV1(1)
<---------------
AGL15
<---------
ANAC46
<
----->
TOE2(3)
--------->
MYB46(3)
<-----------
GT1
------>
MYB46(1)
<---------
ANAC55(2)
----
ctaaaccgaatcagcaatttcaacaacagagcgacgcaatttcacattctggaaaaaccaaatttctcaaatgcgatttcgtatccaacgacatatttat
11641600
------>
ZmHOX2a(2)
<---------
ARR14(2)
<---------
AGP1
--------->
ARR11(3)
<---------
ARR11(3)
--------->
ARR14(2)
--------->
DEAR3(1)
----------->
HVH21
<---------
HSFC1(2)
<------
NtERF2
------>
ZmHOX2a(2)
<---------
ARR14(2)
--------->
DEAR3(2)
<---------
ARR11(3)
<---------
LBD16
<---------
ANAC46
<---------
CCA1(2)
--------->
ARR11(3)
--------->
MYB52(1)
<---------
LBD16
------>
NtERF2
--------->
GLK1(2)
--------->
ARR11(3)
--------->
HSFC1(2)
<---------
ATERF1(1)
---------
GLK1(2)
--------->
MYB52(1)
<---------
GLK1(2)
--------->
ANAC58
----->
YAB1
<------
ZmHOX2a(2)
--------->
MYB46(3)
--------->
ARR14(2)
--------->
ANAC58
cagaatcgaaacgatctcgattagaaatctaac
cgatgaagaaattgacggattttgggatgtttcggagtaacaagccgacgctggatcttcagagcga
11641700
<<<<<<<<<
TBF1
<<<<<<<<<
TBF1
<<<<<<<<<
TBF1
<<<<<<<<<
TBF1
<<<<<<<<<
TBF1
<---------
ZAT6
<------------------------
ANAC81
------>
ZmHOX2a(1)
<------------------------
ANAC81
<
--------->
At4g35610
<----------
DOF2
<<<<<<<<<
TBF1
------
<---------
At4g35610
<------------------------
ANAC81
<------
gcctataagtccgtctcagtcccaagaagtaagctgttcctagagttatctcccaaaacaccat
cttctttcttcttcttcttcttcttcttcggctaca
11641800
<---------
DOF5.7(2)
<---------
WRKY38(1)
<------
MYB83
<----------
DOF2
--------->
ALFIN1
<---------
DAG2
*
TSS
<---------
ALFIN1
<---------
MYB52(1)
<---------
ANAC46
<------
ZmHOX2a(2)
--------->
ATHB12
<-----------
HVH21
<------
MYB46(1)
--------->
ARR14(2)
<---------
TOE1(2)
--------->
WOX13(1)
<---------
MYB46(3)
------>
ZmHOX2a(1)
---------
YAB1
<-----------
TGA1
<---------
ANAC58
<---------
ARR14(2)
<---------
ANAC58
-
--->
REM1(1)
<-----------
HVH21
<---------
ANAC58
----------->
ARR10
<---------
ANAC58
<----
---
REM1(2)
------>
ZmHOX2a(2)
----------->
HVH21
--------->
MYB52(1)
--------->
DEAR3(1)
<------
cgattatcgcatgatcgccattttcgtcagtcactgaccttttggctggtt
aacggtgatgcgatcctcaccgtctatttccttgttcgaagaagtcatt
11641900
--------->
DOF5.7(2)
<---------
DAG2
<---------
ZAT18
<---------
MYB52(1)
<-------
GAMYB
<---------
DOF5.7(2)
<---------
DEAR3(2)
--------->
MYB55(2)
<-----------
RAV1(1)
--------->
MYB52(2)
<---------
MYB46(3)
<---------
MYB52(1)
<---------
MYB52(1)
--------->
CCA1(2)
<----------
DOF2
<---------
RAP2.6(3)
------->
GAMYB
<---------
MYB52(1)
<---------
YAB1
<---------
PCF2
<----------
DOF2
--------->
CCA1(2)
<---------
AHL20(1)
---------->
TCP11(1)
--------->
MYB52(1)
<---------
RAP2.6(3)
---------->
DOF2
--------->
ARR11(3)
-------
RAV1(1)
<---------
ALFIN1
--------->
ARR11(3)
<---------
ICU4
<---------
ARR11(3)
------
CBF
--------->
PCF2
<---------
ARR11(3)
--------->
YAB1
<---------
ATHB12
<------
gtgggccgtctgttggcccactttaacggagtagatatatgggccgtctgttttttcataattttgtaaagtttcccaaacaatatctttgttttgatga
11642000
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(1)
--------->
AHL20(1)
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
ATHB51
--------->
YAB1
<--------
HAHB4
<--------
ATHB1
--------->
ARR11(3)
<---------
ICU4
<---------
ARR11(3)
-------->
HAHB4
<---------
ICU4
--------->
AHL20(2)
<---------
GLK1(2)
<---------
YAB1
--------->
YAB1
--------->
AHL20(2)
--------->
ICU4
--------->
YAB1
--------->
AHL20(2)
<---------
DAG2
<---------
ATHB51
--------->
ICU4
<---------
HSFB2a(2)
<----------
DOF2
----------->
GT1
--------->
YAB1
<---------
AHL20(1)
--------->
HSFB2a(2)
---
YAB1
----------->
GT1
--------->
YAB1
--------->
YAB1
<---------
YAB1
<---------
RVE1(1)
tacaactttattttgtgaagaaaaatgtagaaaatcataaactaataacataataattaaatttattaataatcacagattttttctataaattaactca
11642100
<---------
AHL20(1)
--------->
AHL20(2)
--------->
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
ATHB51
--------->
YAB1
<--------
HAHB4
<---------
ICU4
<--------
ATHB1
--------->
ICU4
<---------
ATHB51
<---------
YAB1
--------->
AHL20(2)
--------->
YAB1
<---------
TOE2(3)
<---------
AHL20(2)
--------->
AHL20(1)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(1)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(1)
<--
--------->
ANAC55(2)
-------->
HAHB4
---------->
DOF2
<-------
<-----------
GT1
--------->
YAB1
--------->
AHL20(1)
--------->
YAB1
--------->
AHL20(2)
--------->
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
--------->
YAB1
---------->
DOF2
--------
<---------
AHL20(2)
<-----------
GT1
<---------
AHL20(2)
<---------
YAB1
<---------
YAB1
---------->
DOF2
aatttaaatttacataataaattaacataataattaaatttatttaaatgtttctaatattctaataacaaagcttatgaaagtctcattaaaaagatag
11642200
<------
ZmHOX2a(2)
=====================
<---------
ARR11(3)
--------->
ANAC58
---------->
DOF2
----------->
GT1
--------->
ANAC46
--------->
TOE2(3)
<---------
ZAT6
--------->
ANAC58
<---------
MYB59
-------
-------
ZAT14
<---------
ANAC55(2)
--------->
TOE1(3)
--------->
YAB1
--
ARR11(3)
<---------
MYB46(3)
<---------
LBD16
--------->
YAB1
--------->
ARR11(3)
<--
->
ARR11(3)
<---------
AtLEC2
<------
ZmHOX2a(1)
<---------
TOE2(3)
--------->
AHL20(2)
-------
tccagagttaaaatttacatggattgttggaactaataaggagataactacggaaactaatgaaacataacctaaataaaagatcaacacttataatcta
11642300
<
<-----------
GT1
--
<---------
AHL20(2)
<-----
<-----------
GT1
--------->
AHL20(2)
--------->
MYB52(1)
====
HOX2a_HOX2a
--------->
AHL20(2)
<---------
AHL20(2)
<---------
WRKY12
<-
-->
TOE2(2)
<---------
AHL20(2)
<---------
MYB46(3)
--------->
At4g35610
<-
----
ZmHOX2a(1)
--------->
TOE2(2)
--------->
MYB52(2)
--------->
DAG2
<---------
ZAT6
-->
TOE1(2)
--------->
TOE1(2)
<---------
MYB52(1)
---------->
DOF2
-----------
ggagaataatttttcaaaacataagattaattaactaaatcaaaccgttcgtttgattttttttttcacttgaaaaaagcagaggccaacgagtgttata
11642400
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AGI:
At1g32260.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G35480.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63339.1)
Range:
from: 11640561
to: 11641851
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.