Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           ------->GAMYB                                                                        <------------MYB.PH3(2)                                                                        <---------MYB52(2)                                                                        --------->MYB46(3)                                                                      ----------->RAV1(1)                                                                     <----------ID1                                            --------->ANAC58       --------->ANAC58                                         ------>MYB83              --------->ANAC46                                         -------->P                --------->ANAC58                            <----------ID1  --------->AtLEC2      --------->DAG2              --------->ZAT14            ------>MYB46(1)         ---------->DOF2              <---------ZAT14           ----------->RAV1(1) --------------->AGL15   <----------DOF2----------->GT1      --------->AtMYB61   ----------------->AGL2                  <- ->DOF2       <-------TEIL--------->MYB52(1)--------->ANAC58<---------------AGL15         -------->P   cttgactttagccaagtacagagttacaaaacgacaatagaccaacatgcaaaactctaaaacccaaaaaagcaacaaactttcaaaagactaaccagaa  11056500                                                                                  --------->REM1(2)                                                                                  --------->ZAT14                                                                                  <---------ZAT14                                                                       <-----------GT1                                                                     --------->HSFC1(2)                                        <-------TEIL                 <---------HSFC1(2)                                     --------->HSFC1(2)              --------->HSFB2a(1)                                     <---------HSFC1(2)              <---------HSFB2a(1)           --------->YAB1            <---------HSFB2a(1)           <---------GLK1(2)           <-----         ------->TEIL          --------->At4g35610        <---------ANAC58       --------->ALFIN1 ----------GT1               --------->YAB1               <---------ANAC58     <---------ANAC46------   gttactagatgaatcagactcagacttggaatcagaagaaggttcatgagaaatgactgtgcctgcccagaattttccatcgagtgtagagtcgaactga  11056600                                                     --------------->AtSPL8                                                     --------->ANAC58                                                     <---------------AtSPL3                                                     --------------->AtSPL3                                                     --------->ANAC58          --------->ANAC58                          --------->SPL7         ------->TEIL                             <---------SPL7        <---------DOF5.7(2)                      <------MYB83       <---------WRKY38(1)                       <------MYB46(1)    <---------MYB46(3)                           <---------DEAR3(2)    <------MYB46(1)                             <---------MYB46(3)    <------MYB83 --------->WOX13(1)             --------->MYB111(2)   --------->MYB111(2)                          <---------------AtSPL3   <---------AtMYB61--------->AHL20(2)          --------->MYB46(2)   <---------DEAR3(1)                           <---------------AtSPL8             --------->DEAR3(1)   --------->MYB46(2)                           --------->MYB59                    ----------->HVH21   --------->MYB55(2)                           <---------AtMYB61                ------>ZmHOX2a(1)   --------->MYB111(1)                          --------->MYB111(1)          <---------ALFIN1   <---------MYB46(3)<---------AHL20(2)        <--------P                  <---------ATERF1(1)  <----  <---------MYB55(1)<---------AHL20(2)         <---------MYB55(1)        ------>NtERF2          -----  <--------P   --------->MYB46(3)       <----------DOF2  --------->SPL7 --------->ANAC46        <---- ----ZAT14--------->ANAC46              ----------------------->TaNAC69(2) <---------ALFIN1     ----- --->ZAT14--------->ANAC58     <---------ZAT6 <-------GAMYB        <-----------HVH21------>NtERF2   actggttggtgaacgtaaccaattaaatctatagagttcgcgattttgggttggtacggtacctccatcggtctcggccactcctccgacgatttctcag  11056700                          <---------RAP2.6(2)                     <---------------AtSPL3                   --------->LBD16                   ------>NtERF2                 <---------LBD16             ------>ZmHOX2a(1)                                                                 ------         <---------ALFIN1--------->SPL7  --------->LBD16                                  <---------HSFB2a(2)       ------>ZmHOX2a(1) --------->RAP2.6(3)                                        <---------ARR11(3) -----ZAT2  <---------ALFIN1            <---------ANAC58                          --------->ICU4 ---->ZAT2------>ZmHOX2a(1)             <---------ANAC46                ---------->DOF2   --------->HSFB2a(2) -----At4g35610 ------>ZmHOX2a(1)       <---------ANAC58        <---------ANAC46  <---------ATHB12 ---->At4g35610<---------ALFIN1     <----------DOF2       --------->ARR11(3)      <---------YAB1   ctctgtttcctcctcctcctccgcgagtacggctactactttccgtagaagaagttgaaagaaattgctgagaagaaagaacccatgattttctagcagt  11056800                                                     <---------ANAC55(2)                                                 <----------DOF2                 <---------TOE1(3)                                        --------->ANAC58            <----------DOF2                                        --------->ANAC46      <-------TEIL  <----------DOF2           --------->ARR11(3)           --------->ANAC58     --------->CCA1(2)   <---------TOE2(3)           <---------ARR11(3)     ------>ZmHOX2a(2)  <---------ANAC58      --------------->AGL15     <---------TOE2(3)          <---------ARR11(3)   <---------ANAC46      <---------------AGL15  <-- --->At4g35610                  --------->ARR11(3)   <---------ANAC58   <-----------GT1        ------   tgaatttaacgaaggtcttatcgatttcgaaattgatcttccaagaaactgcatttcgtgaagattcaaacttttagccttttagggtttatggggtttg  11056900                                                           <---------ARR14(2)                                                           --------->ARR14(2)    --------->At5g28300                              --------->GLK1(2)         <---------ANAC46         <------NtERF2                      <----------DOF2                   <---------ANAC58        --------->LBD16                   ------>NtERF2 <---------LBD16        <---------ANAC58       --------->ANAC46                  --------->ANAC58        ------------>CBF<---------MYB52(1)  <---------LBD16          ---------->DOF2    <---------GLK1(2)  --------->MYB52(1)           <---------ANAC58  *TSS---------->DOF2<---------DAG2    <-------TEIL    <------NtERF2         <---------ANAC58 --------ID1      --------->ANAC58 <---------TOE1(2)  ------>NtERF2---------->DOF2                  < ----->HVH21      --------->ANAC46<---------LBD16     --------->ABI4(2)      <---------ANAC46       <   acgacaaaaaaagaaagactacgcctttttagattctcgggttcgtcaataaacggtgccgtttcttcacaaagtcgtttcgcggcaaaaaactaaacga  11057000          ------------>CBF          --------->SPL7       <---------ANAC58                                                                        <-----       <---------ANAC58  --------->ANAC55(2)                                                 --------       <---------ANAC46  --------->ANAC58                                                   <--------     <---------ANAC46    --------->ANAC58        <---------At4g35610           <-------GAMYB---------     <---------ANAC58    <---------ANAC55(2) <---------bZIP60(2)     <----------DOF2        <--------     <---------ANAC58    --------->ANAC46    <---------O2           <---------ANAC58  ----------->GT1 ---------ANAC58  --------->ZAT18           <---------LBD16         <---------ANAC58  *TSS  --------- ---------ANAC58  <---------ZAT18         ----------->HVH21       ------->TEIL----------->GT1<-------   tgtcgtttcgcgtacaatagtgcccttacgaaacgatgctgtttttgacggggctgatttagaaaacgtagcttttgtgagggttattttgtaatttatt  11057100                              <------NtERF2                             --------->LBD16                             ------>NtERF2                             <---------MYB46(3)                            <---------ANAC46                           <------NtERF2                           <---------LBD16                        <---------LBD16                       <---------ANAC58                       <---------ANAC58                      --------->SPL7                     --------->ALFIN1             ---------->DOF2                    <---------SPL7            <------NtERF2 ----YAB1<-----------HVH21 ------>NtERF2     ----------->GT1 ->AHL20(2)        <---------ANAC46         <---------ANAC46 -AHL20(1)         <---------ANAC58        <---------LBD16                              ---------->DOF2 >AHL20(1)         --------->DEAR3(1)     ------>NtERF2<---------GLK1(1)      ---------->DOF2       < -AHL20(2)         <---------ANAC58      <---------DEAR3(1)                --------->TOE1(3)     <--- >AHL20(2)   <---------O2 <---------ATERF1(1)--------->LBD16               --------->TOE2(3)     ---- --AHL20(2)  --------->O2<---------DEAR3(1)<------NtERF2                --------->GLK1(1)--------->DAG2   tttgtttagtttgtcacttcgccgtgcgcggcgggagagaacgctggcggaaaaaagaaatcggaaaactggagaaaccctaaatcgacgaaaaggagag  11057200                                                                                                   --                 <---------ANAC46                                                             -------                 <---------ANAC58                                                             -------           --------->HSFC1(2)                                                            <---------ALFIN1           <---------HSFC1(2)                                                           --------->LBD16           --------->ZAT2                                                              --------->ANAC58           <---------ZAT2                                                    <---------ARR11(3)    -- ----------DOF2  <---------ANAC58                                    <----------DOF2   --------->ANAC58 ------ARR11(3)<------MYB83           <---------WRKY12  <-----------RAV1(2)  --------->ARR11(3)    -- ----->ARR11(3)<------MYB46(1)        <---------WRKY38(1)      <-----------GT1 ------>ZmHOX2a(2)   <-   acctttgaatcgaagcttggtgtgtttatactatgaagagtcaatggtctaattttcatcaggtttttcatctttctctgatcttagacccccaattccg  11057300                                                                            --------->ANAC55(2)                                                                            <---------ANAC58 ------->HSFC1(2)                                                           <---------ANAC58 -------->AtSPL3                                               ----------------------->TaNAC69(2) -------->AtSPL8                                           <---------ZAT2  <---------TOE2(3) ------->HSFB2a(1)                    <---------ARR14(2)   --------->At4g35610 ------->MYB46(3)                     --------->ARR14(2)   <---------At4g35610 --------HSFC1(2)         <---------MYB52(1)        <----------DOF2       <-----------GT1   aaccatctctgattctattcccaaactcgttgtttttgcagattgggagaaactctttcttagctgcttctactgtttacgtttcaaacgaattcaactt  11057400  Previous    Next  AGI:  At1g31010.1    Description:  OSB4 (ORGANELLAR SINGLE-STRANDED DNA BINDING PROTEIN 4); single-stranded DNA binding. similar to OSB2/PTAC9 (PLASTID TRANSCRIPTIONALLY ACTIVE9), single-stranded DNA binding [Arabidopsis thaliana] (TAIR:AT4G20010.1); similar to mitochondrial SBP40 [Solanum tuberosum] (GB:AAX34397.1); contains InterPro domain Primosome PriB/single-strand DNA-binding; (InterPro:IPR000424); contains InterPro domain Nucleic acid-binding, OB-fold (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold-like (InterPro:IPR016027) Range:  from: 11054712    to: 11056902    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g31020.1    Description:  ATO2 (Arabidopsis thioredoxin o2); thiol-disulfide exchange intermediate. similar to ATO1 (ARABIDOPSIS THIOREDOXIN O1) [Arabidopsis thaliana] (TAIR:AT2G35010.2); similar to ATO1 (ARABIDOPSIS THIOREDOXIN O1), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT2G35010.1); similar to putative thioredoxin [Pisum sativum] (GB:CAJ84246.1); contains InterPro domain Thioredoxin family (InterPro:IPR015467); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thio Range:  from: 11057086    to: 11058848    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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