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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
------->
GAMYB
<------------
MYB.PH3(2)
<---------
MYB52(2)
--------->
MYB46(3)
----------->
RAV1(1)
<----------
ID1
--------->
ANAC58
--------->
ANAC58
------>
MYB83
--------->
ANAC46
-------->
P
--------->
ANAC58
<----------
ID1
--------->
AtLEC2
--------->
DAG2
--------->
ZAT14
------>
MYB46(1)
---------->
DOF2
<---------
ZAT14
----------->
RAV1(1)
--------------->
AGL15
<----------
DOF2
----------->
GT1
--------->
AtMYB61
----------------->
AGL2
<-
->
DOF2
<-------
TEIL
--------->
MYB52(1)
--------->
ANAC58
<---------------
AGL15
-------->
P
cttgactttagccaagtacagagttacaaaacgacaatagaccaacatgcaaaactctaaaacccaaaaaagcaacaaactttcaaaagactaac
cagaa
11056500
--------->
REM1(2)
--------->
ZAT14
<---------
ZAT14
<-----------
GT1
--------->
HSFC1(2)
<-------
TEIL
<---------
HSFC1(2)
--------->
HSFC1(2)
--------->
HSFB2a(1)
<---------
HSFC1(2)
<---------
HSFB2a(1)
--------->
YAB1
<---------
HSFB2a(1)
<---------
GLK1(2)
<-----
------->
TEIL
--------->
At4g35610
<---------
ANAC58
--------->
ALFIN1
----------
GT1
--------->
YAB1
<---------
ANAC58
<---------
ANAC46
------
gttactagatgaatcagactcagacttggaatcagaagaaggttcatgagaaatgactgtgcctgcccagaattttccatcgagtgtagagtcgaactga
11056600
--------------->
AtSPL3
--------->
ANAC58
--------------->
AtSPL8
<---------------
AtSPL3
--------->
ANAC58
--------->
ANAC58
--------->
SPL7
------->
TEIL
<---------
SPL7
<---------
DOF5.7(2)
<------
MYB83
<---------
WRKY38(1)
<------
MYB46(1)
<---------
MYB46(3)
<---------
DEAR3(2)
<------
MYB46(1)
--------->
MYB59
<------
MYB83
--------->
WOX13(1)
<---------------
AtSPL3
--------->
MYB111(2)
--------->
MYB46(2)
<---------
AtMYB61
--------->
AHL20(2)
<---------
MYB46(3)
<---------
DEAR3(1)
<---------
AtMYB61
--------->
DEAR3(1)
--------->
MYB46(2)
--------->
MYB111(2)
----------->
HVH21
--------->
MYB55(2)
<---------------
AtSPL8
------>
ZmHOX2a(1)
--------->
MYB111(1)
--------->
MYB111(1)
<---------
ALFIN1
<---------
MYB46(3)
<---------
AHL20(2)
<--------
P
<---------
ATERF1(1)
<----
<---------
MYB55(1)
<---------
AHL20(2)
<---------
MYB55(1)
------>
NtERF2
-----
<--------
P
--------->
MYB46(3)
<----------
DOF2
--------->
SPL7
--------->
ANAC46
<----
----
ZAT14
--------->
ANAC46
----------------------->
TaNAC69(2)
<---------
ALFIN1
-----
--->
ZAT14
--------->
ANAC58
<---------
ZAT6
<-------
GAMYB
<-----------
HVH21
------>
NtERF2
actggttggtgaacgtaaccaattaaatctatagagttcgcgattttgggttggtacggtacctccatcggtctcggccactcctccgacgatttctcag
11056700
<---------
RAP2.6(2)
<---------------
AtSPL3
--------->
LBD16
------>
NtERF2
<---------
LBD16
------>
ZmHOX2a(1)
------
<---------
ALFIN1
--------->
RAP2.6(3)
<---------
HSFB2a(2)
------>
ZmHOX2a(1)
--------->
SPL7
--------->
LBD16
<---------
ARR11(3)
-----
At4g35610
------>
ZmHOX2a(1)
<---------
ANAC58
--------->
ICU4
---->
ZAT2
<---------
ALFIN1
<---------
ANAC46
---------->
DOF2
--------->
HSFB2a(2)
-----
ZAT2
------>
ZmHOX2a(1)
<---------
ANAC58
<---------
ANAC46
<---------
ATHB12
---->
At4g35610
<---------
ALFIN1
<----------
DOF2
--------->
ARR11(3)
<---------
YAB1
ctctgtttcctcctcctcctccgcgagtacggctactactttccgtagaagaagttgaaagaaattgctgagaagaaagaacccatgattttctagcagt
11056800
<---------
ANAC55(2)
<----------
DOF2
<---------
TOE1(3)
--------->
ANAC46
<----------
DOF2
--------->
ANAC58
<-------
TEIL
<----------
DOF2
--------->
ARR11(3)
--------->
ANAC58
--------->
CCA1(2)
<---------
TOE2(3)
<---------
ARR11(3)
------>
ZmHOX2a(2)
<---------
ANAC58
--------------->
AGL15
<---------
TOE2(3)
<---------
ARR11(3)
<---------
ANAC58
<---------------
AGL15
<--
--->
At4g35610
--------->
ARR11(3)
<---------
ANAC46
<-----------
GT1
------
tgaatttaacgaaggtcttatcgatttcgaaattgatcttccaagaaactgcat
ttcgtgaagattcaaacttttagccttttagggtttatggggtttg
11056900
<---------
ARR14(2)
--------->
ARR14(2)
--------->
At5g28300
--------->
GLK1(2)
<---------
ANAC58
<------
NtERF2
<----------
DOF2
<---------
ANAC46
--------->
LBD16
------>
NtERF2
<---------
LBD16
<---------
ANAC58
--------->
ANAC46
--------->
ANAC58
------------>
CBF
<---------
MYB52(1)
<---------
LBD16
---------->
DOF2
<---------
GLK1(2)
--------->
MYB52(1)
<---------
ANAC58
*
TSS
---------->
DOF2
<---------
DAG2
<-------
TEIL
<------
NtERF2
<---------
ANAC58
--------
ID1
--------->
ANAC46
<---------
TOE1(2)
------>
NtERF2
---------->
DOF2
<
----->
HVH21
--------->
ANAC58
<---------
LBD16
--------->
ABI4(2)
<---------
ANAC46
<
ac
gacaaaaaaagaaagactacgcctttttagattctcgggttcgtcaataaacggtgccgtttcttcacaaagtcgtttcgcggcaaaaaactaaacga
11057000
--------->
SPL7
------------>
CBF
<---------
ANAC58
<-----
<---------
ANAC46
--------->
ANAC55(2)
<-------
<---------
ANAC58
--------->
ANAC58
<--------
<---------
ANAC58
--------->
ANAC58
<---------
At4g35610
<-------
GAMYB
---------
<---------
ANAC46
<---------
ANAC55(2)
<---------
bZIP60(2)
<----------
DOF2
---------
<---------
ANAC58
--------->
ANAC46
<---------
O2
<---------
ANAC58
----------->
GT1
---------
ANAC58
--------->
ZAT18
<---------
LBD16
<---------
ANAC58
*
TSS
<--------
---------
ANAC58
<---------
ZAT18
----------->
HVH21
------->
TEIL
----------->
GT1
--------
tgtcgtttcgcgtacaatagtgcccttacgaaacgatgctgtttttgacggggctgatttagaaaacgtagcttttgtgagggtt
attttgtaatttatt
11057100
<------
NtERF2
--------->
LBD16
------>
NtERF2
<---------
MYB46(3)
<---------
ANAC46
<---------
LBD16
<------
NtERF2
<---------
LBD16
<---------
ANAC58
<---------
ANAC58
--------->
SPL7
--------->
ALFIN1
---------->
DOF2
<---------
SPL7
<------
NtERF2
----
YAB1
<-----------
HVH21
------>
NtERF2
----------->
GT1
--
AHL20(2)
<---------
ANAC46
<---------
ANAC46
-
AHL20(1)
<---------
ANAC58
<---------
LBD16
---------->
DOF2
>
AHL20(2)
--------->
DEAR3(1)
------>
NtERF2
<---------
GLK1(1)
---------->
DOF2
<
>
AHL20(1)
<---------
ANAC58
<---------
DEAR3(1)
--------->
TOE1(3)
<---
-
AHL20(2)
<---------
O2
<---------
ATERF1(1)
--------->
LBD16
--------->
TOE2(3)
----
->
AHL20(2)
--------->
O2
<---------
DEAR3(1)
<------
NtERF2
--------->
GLK1(1)
--------->
DAG2
tttgtttagtttgtcacttcgccgtgcgcggcgggagagaacgctggcggaaaaaagaaatcggaaaactggagaaaccctaaatcgacgaaaaggagag
11057200
--
<---------
ANAC46
-------
<---------
ANAC58
-------
--------->
HSFC1(2)
<---------
ALFIN1
<---------
HSFC1(2)
--------->
LBD16
--------->
ZAT2
--------->
ANAC58
<---------
ZAT2
<---------
ARR11(3)
--
----------
DOF2
<---------
ANAC58
<----------
DOF2
--------->
ANAC58
------
ARR11(3)
<------
MYB83
<---------
WRKY12
<-----------
RAV1(2)
--------->
ARR11(3)
--
----->
ARR11(3)
<------
MYB46(1)
<---------
WRKY38(1)
<-----------
GT1
------>
ZmHOX2a(2)
<-
acctttgaatcgaagcttggtgtgtttatact
atgaagagtcaatggtctaattttcatcag
gtttttcatctttctctgatcttagacccccaattccg
11057300
--------->
ANAC55(2)
<---------
ANAC58
------->
HSFC1(2)
<---------
ANAC58
-------->
AtSPL3
----------------------->
TaNAC69(2)
-------->
AtSPL8
<---------
ZAT2
<---------
TOE2(3)
------->
HSFB2a(1)
<---------
ARR14(2)
--------->
At4g35610
------->
MYB46(3)
--------->
ARR14(2)
<---------
At4g35610
--------
HSFC1(2)
<---------
MYB52(1)
<----------
DOF2
<-----------
GT1
aaccatctctgattctattcccaaactcgttgtttttgcag
attgggagaaactctttcttagctgcttctactgtttacgtttcaaacgaattcaactt
11057400
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AGI:
At1g31010.1
Description:
OSB4 (ORGANELLAR SINGLE-STRANDED DNA BINDING PROTEIN 4); single-stranded DNA binding. similar to OSB2/PTAC9 (PLASTID TRANSCRIPTIONALLY ACTIVE9), single-stranded DNA binding [Arabidopsis thaliana] (TAIR:AT4G20010.1); similar to mitochondrial SBP40 [Solanum tuberosum] (GB:AAX34397.1); contains InterPro domain Primosome PriB/single-strand DNA-binding; (InterPro:IPR000424); contains InterPro domain Nucleic acid-binding, OB-fold (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold-like (InterPro:IPR016027)
Range:
from: 11054712
to: 11056902
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At1g31020.1
Description:
ATO2 (Arabidopsis thioredoxin o2); thiol-disulfide exchange intermediate. similar to ATO1 (ARABIDOPSIS THIOREDOXIN O1) [Arabidopsis thaliana] (TAIR:AT2G35010.2); similar to ATO1 (ARABIDOPSIS THIOREDOXIN O1), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT2G35010.1); similar to putative thioredoxin [Pisum sativum] (GB:CAJ84246.1); contains InterPro domain Thioredoxin family (InterPro:IPR015467); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thio
Range:
from: 11057086
to: 11058848
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.