Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ------>YAB1            <---------AHL20(2)          <----------ID1 ------ATHB12         <---------YAB1                ----------->GT1                    <------ZmHOX2a(1) ------YAB1        --------->AHL20(1)           ---------->DOF2    ----------->GT1    ----------->GT1 ->MYB46(1)        <---------AHL20(1)         <---------AHL20(2)  --------->DAG2     ----------->GT1 ->MYB83           <---------AHL20(2)        --------->AHL20(2)  ---------->DOF2--------->YAB1 >HVH21            --------->AHL20(2)  --------->YAB1       ----------->GT1<---------MYB52(2)      --   tcattttcaaaatgaattcaatttattattttgttagtaaatgacaatttaaaagagaaaaactgaaaaaagtgacaactaatcagagaggaaaattgat  10638500                                                            <---------ICU4                                                            -------->HAHB4                                                            <--------ATHB1                                                            --------->YAB1        <-----------GT1                                                           --------->ICU4    <---------ANAC58                                                           <---------ATHB51  <---------ANAC58                                                   <---------DAG2          <-----------GT1                                      <---------ICU4     --------->YAB1<---------RVE1(1)       <-----               <-------TEIL          <---------ATHB12  <---------YAB1 <---------ARR11(3)      <------          --------->CCA1(2)    --------->TOE2(3)   <---------MYB59    <---------GLK1(2) <----------DOF2 ----->TEIL<-------TEIL   <---------ICU4           --------->TOE2(3)  --------->ARR11(3)<---------DAG2   gaattttgtaagatacatacacatctaatctttccataaatcattctaaactaccttattaataattctatagattttttcttgttaccactttttttaa  10638600                                     ------->GAMYB                                     ----------->HVH21                                    <------------AtMYB77                                   >>>>>>>>>MYB1                                   >>>>>>>>>MYB2                                 ------>ZmHOX2a(1)            --------->ARR14(2)                          --------->AHL20(2)                  <---------ARR14(2)                          <---------AHL20(2)       >>>>>>>>>CBP60g                               <---      <---------GLK1(1)   --------->AHL20(1) --------->HSFB2a(2)                              <------   <---------YAB1         <---------AHL20(1) <---------HSFB2a(2)                       --------->YAB1 ------GT1          --------->YAB1--------->MYB52(1)      <-------TEIL                 <---------ICU4 -----GT1      <---------ZAT14  <---------MYB59    >>>>>>>>>SARD1             <---------ZAT18 -------   cagttttgatttctgagtacaatgctaatttattcctaactgacactctggaaatttgggtccatatacacttctcatggttcacttaaacatgactatc  10638700                                                         <-----------GT1                                                      ------>ZmHOX2a(2)                                                     <------ZmHOX2a(2)                                                    --------->ARR11(3)                                                    <---------ARR14(2)                                                    <---------AGP1                                                    --------->ARR14(2)                                                    <---------ARR11(3)                                                   <---------CCA1(2)                                <---------ANAC58  ----------->ARR10    --------->YAB1   <---------YAB1          <---------ANAC58            <---------AHL20(2) -------DOF2       <---------ICU4            <---------ANAC58  <----------DOF2                  ----- ---ARR11(3)       --------->YAB1            <---------ANAC46----------->GT1           --------->ZAT18 -->ARR11(3)      --------->ICU4<---------ANAC58--------->REM1(2)--------->ATHB12 ---------->DOF2 ---   tttcattcatagacagaagaattatgaattgttttcttgatgctctatcgtgtagatcttaaccggtttattgatttttttttgtaaagcccaccaagat  10638800                       --------->ATHB12                      <---------YAB1                      --------->ICU4                     <---------ARR11(3)                                                     ------>NtERF2            >>>>>>>>>MYB2                      ---------->DOF2               --------->TOE1(2)-------            >>>>>>>>>MYB1        <-----------TBP                             --------->TOE2(2)<------           --------->MYB52(1)  ----------->RAV1(1)                     <---------ICU4      --------->ANAC46         <---------MYB59<------------CBF  --------->ZAT18       --------->TOE1(3)    <---------GLK1(1) ---->CCA1(2)      ----------->GT1      --------->PCF2         ----------->GT1   --------->YAB1*TSS-- ------->DOF2     <------ZmHOX2a(1) --------->ARR14(2)   --------->TOE1(2) ------->TEIL ---------->CDC5   aaaagagaaggcctaactgaggagataattgggccacatataggcccactaaagaaaaacctagaagcttaaataagtacctatgagaactctgcgccat  10638900                                                                                  <----------DOF2                                                                                 ====================                                                                                 ------>ZmHOX2a(2)                                                                                =====================                                                                                <------ZmHOX2a(2)                                                                                <---------RVE1(1)                                                                               <---------ARR11(3)                                                                               <---------ARR14(2)                                                                               --------->ARR14(2)                                                                               --------->ARR11(3)                                                                               --------->ARR14(3)                                                   <---------TOE1(3)           --------->AGP1                                                  <-----------RAV1(2)          <---------ARR14(3)           ------>ZmHOX2a(1)                   <---------At4g35610           ----------->ARR10      -        ------>NtERF2                     <----------DOF2                   --------->SPL7          =  --------->At4g35610                    <---------DAG2                  <---------ANAC55(2)     ----  <---------At4g35610                    <----------DOF2                 --------->ANAC46    -------- -->DEAR3(1)  ------>ZmHOX2a(1)        ------>NtERF2                     --------->ANAC55(2) -------- ---ALFIN1<---------ALFIN1          <---------ATERF1(1) <---------MYB46(3)--------->LBD16    -------- ---->ZmHOX2a(1)              ---------->DOF2  --------->At4g35610<---------GLK1(1)        <---------   cctcttctgcctcctccttcactcttcatcttcaaagactgcgccttttagctcaggtttgttcttcgatttctcccgtaagatcttttgttcttacgcc  10639000     <------MYB46(1)     <------MYB83                                                                            --------    <---------TOE2(3)                                                                        <-------    --------->MYB59                                                                        <------ZmHOX2a(1) ======HOX2a_HOX2a                                                                   --------->ATHB12 ======HOX2a_HOX2a                                                                   <---------ICU4 ----->ZmHOX2a(1)                               --------->ATHB12                    <---------YAB1 ========================HOX2a_HOX2a           <---------AHL20(2)                   <---------ATHB12 -->NtERF2                               --------->YAB1                             --------->ICU4 ->ANAC58                             --------->YAB1                              --------------->AGL15 ->ANAC58            ---------->DOF2 <---------YAB1                            ------>ZmHOX2a(2)    - ->ANAC46         ------>ZmHOX2a(2)  --------->ICU4    <---------GLK1(1)       ===================HOX2a_HOX2a --GT1   --------->MYB52(2)        --------->YAB1 <---------WOX13(1)   <---------ARR14(2)--------->MYB59   tcctattaggtttgtttcgatctcaaagtagccatggtcataatagtatttgattggaaattcgaagtttgagtattttgatccccatgattaggaactc  10639100                                                      ------>ZmHOX2a(2)                                                     <---------At4g35610             <---------At4g35610                                                --------->YAB1                       --------->At4g35610                                            <---------YAB1                    <---------ANAC58 ->GLK1(1)                              <---------ANAC58               ---------->DOF2      --------- --GLK1(1)                              <---------ANAC58   <----------DOF2    <---------ANAC46 -------->ANAC55(2)                 <----------DOF2  --------->At4g35610      <---------ANAC58<------   ttaagtgatgtcttagtgaatcaattttcgatgttgttctttgcttctaattgtgatctgtcttttagcaaaataaagtttcgtttttgctgaatcgttg  10639200                   ------>ZmHOX2a(2)                     <---------LBD16                 --------->ARR11(3)                   <---------ZAT2                 <---------ARR11(3)                   --------->ZAT2                --------->TOE1(3)              ------>ZmHOX2a(2)                   <-------TEIL          --------->At4g35610       <---------MYB46(3)   <----------DOF2    <---------HSFB2a(1)      <---------At4g35610  <------- >ATHB12     <---------At4g35610              --------->DAG2            <------NtERF2    --------->ZAT6 ---MYB52(1)<---------AGP1  <---------DAG2  ---------->DOF2--------->HSFB2a(2)      --------->TOE2(3)   gggttttagtagttgatctgatcttgtctgctttttatatcagtgaaaaaggttcgagcttcggaaactatggcagcattccctaaccttaactctgatg  10639300                                                  <--------P                                         <---------------AGL15             <----------DOF2                                        ----------------->AGL1           ---------->ID1                                   <---------TOE1(2)              <---------AHL20(2)                                ------------>AtMYB77           --------->TOE2(3) --At4g35610         <-----------ARR10 <-------TEIL          <---------ARR11(3)        --------->ALFIN1   ctggattgaagaagctcgacgagcatcttctcactcgcagttacattactgggtaagtttcaatttcttaaatttgtcttttttttcaagtgttgtctca  10639400  Previous    Next  AGI:  At1g30230.1    Description:  elongation factor 1-beta / EF-1-beta. Identical to Elongation factor 1-delta 1 [Arabidopsis Thaliana] (GB:P48006;GB:Q0WWW7); similar to elongation factor 1-beta, putative / EF-1-beta, putative [Arabidopsis thaliana] (TAIR:AT2G18110.1); similar to putative elongation factor 1-beta [Brassica rapa] (GB:ABK78691.1); contains InterPro domain Translation elongation factor EF1B, beta/delta chains, conserved site; (InterPro:IPR001326); contains InterPro domain Translation elongation factor EF1B, beta and delta chains, guanine nucleotide exchange; (InterPro:IPR014038); contains InterPro domain Translation elongation factor EF1B/ribosomal protein S6 Range:  from: 10638895    to: 10640766    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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