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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
---------
<--------
----------->
RAV1(1)
--------->
ANAC46
--------->
ANAC46
--------->
ANAC58
----------->
RAV1(1)
--------->
AHL20(2)
<---------
ALFIN1
<------
----------->
GT1
--------->
YAB1
<---------
YAB1
<---------
ALFIN1
--
<---------
AHL20(2)
--------->
MYB46(3)
--------->
AHL20(1)
--------->
ANAC46
<---------
YAB1
--------->
GT1
----------->
GT1
--------->
AHL20(2)
<-----------
GT1
----------
-
AHL20(2)
<---------
REM1(1)
----------->
GT1
----------->
GT1
--------->
ANAC58
------
ttagtaaattgttaatctattctaatggtgtaactgtaacaaatgagaatgaaaaaaatatactattgtgaataaaaccccacacaacacattactataa
9259200
<---------
<-------
TEIL
------->
MYC4
------->
MYC3
<-------
MYC2
------->
MYC2
<-------
MYC3
---------->
DOF2
------->
MYC3
----------->
GT1
<---------
ANAC46
<---------
HSFB2a(2)
<---------
ANAC58
================================
RAV
<---------
ANAC58
--------->
ATERF1(1)
<---------
ALFIN1
<-------
MYC3
<------
NtERF2
----------->
HVH21
<---------
TGA1a
----------->
RAV1(2)
----------->
RAV1(1)
<-----------
HVH21
===============
------>
AGL15
------>
NtERF2
--------->
ANAC58
--------->
ANAC58
===============
-------
AGL15
<---------
RAP2.3(1)
<----------
ID1
--------->
ANAC58
--------->
TGA1a
---
YAB1
--------->
ATERF1(1)
--------->
ANAC58
<------
ZmHOX2a(1)
<---------
ZAT18
--------->
GT1
--------->
RAP2.3(1)
--------->
DAG2
=========================================
bZIP_DOF
------->
AGL3
<---------
ATERF1(1)
---------->
DOF2
<----------
DOF2
--------->
ARR14(2)
--->
YAB1
<----------
DOF2
--------->
HSFB2a(2)
<---------
DEAR3(1)
<---------
ARR14(2)
---
taagttaaacttctttttttgtaggcgcctggaaaaaaaagaaaagcaacaagagggctgtgaggacgcatcaccggtttcgtagcacacatgtgcattt
9259300
--------->
AHL20(2)
--------->
TOE2(3)
<---------
DAG2
<---------
AHL20(2)
<-----------
GT1
<----------
DOF2
--------->
AHL20(1)
--------->
YAB1
<---------
ANAC58
--------->
AHL20(2)
<---------
AHL20(1)
<---------
ANAC58
<---------
ATHB12
--------->
GLK1(2)
--------->
AHL20(1)
<----------
DOF2
<-----------
GT1
<---------
AHL20(1)
<---------
ARR11(3)
<---------
AHL20(2)
---------------
ANAC81
--------->
WOX13(1)
--------->
ARR11(3)
<---------
YAB1
============
bZIP_DOF
<---------
ANAC58
----------->
GT1
<---------
AHL20(1)
<------
============
bZIP_DOF
<---------
ANAC58
------>
ZmHOX2a(1)
--------->
AHL20(1)
-------
------->
ID1
<---------
MYB52(1)
<---------
AHL20(2)
---------->
DOF2
--------->
AHL20(2)
--------
gtctctttgctttttcggtttttttcttgccaatcaatttattttgttcctcagaaaaaagaaaatctaaaaccaaaatatatattataacctcatttaa
9259400
<--
<--
---
--------->
TOE2(3)
---------->
DOF2
----
----------->
RAV1(1)
--------->
ARR11(3)
<---------
YAB1
----
<----------
ID1
---------->
DOF2
<---------
MYB59
<------
MYB46(1)
----
---
AHL20(2)
<-------
GAMYB
--------->
DAG2
<---------
WRKY18(1)
----------->
GT1
----
-->
AHL20(2)
--------->
MYB52(2)
<-----------
GT1
---------->
DOF2
<---------
TOE2(3)
->
AHL20(2)
<---------
MYB46(3)
<---------
AHL20(2)
<----------
DOF2
<------
MYB83
-------
taaacaacaaaaatgtttgttgaaaaaaaaaaagtttttatttatcttgaccttatttctttgaagaaaataaagcttggttattaaagaagtccaagtt
9259500
--------->
ATHB12
<-----------
HVH21
--------->
AtMYB61
--------->
MYB46(3)
<---------
ALFIN1
------>
NtERF2
<---------
At4g35610
-------
At4g35610
<---------
ALFIN1
-----
GAMYB
--------->
AtMYB61
------>
At4g35610
---------->
DOF2
--------->
AHL20(2)
------>
MYB46(1)
------>
MYB83
----->
MYB111(2)
--------->
AHL20(2)
--------->
HSFB2a(2)
------>
MYB83
------>
MYB46(1)
----->
MYB111(1)
--------->
At5g28300
<---------
HSFB2a(2)
--------->
DEAR3(1)
----->
MYB46(2)
----------->
GT1
<---------
TOE2(3)
--------->
MYB46(3)
*
TSS
----
----->
MYB52(2)
------->
GAMYB
---------->
DOF2
<-----------
GT1
--------->
ANAC46
----->
MYB.PH3(2)
--------->
MYB52(1)
------>
ZmHOX2a(1)
----------->
TBP
--------->
At4g35610
-----
agttgccaccatcagtggcataacggtaaattaaagccaacttcctctaactaaagttttctataaattcaaccactcacctcccactcta
aaacccaac
9259600
--------->
GLK1(1)
<------
ZmHOX2a(2)
<---------
GLK1(1)
--------->
ARR11(3)
--------->
ARR14(3)
<---------
ARR14(2)
--------->
ANAC55(1)
<---------
ARR14(3)
--------->
ANAC55(2)
<---------
AGP1
<---------
ANAC55(2)
<---------------
AGL15
--------->
ANAC46
<---------
ARR11(3)
<---------
ARR11(3)
--------->
ANAC58
--------->
ARR11(3)
--------->
ARR14(2)
--------->
ANAC58
<---------
CCA1(2)
----------->
ARR10
----------->
GT1
<-----------
GT1
--------------->
AGL15
<-------
TEIL
<---------
ICU4
<-----------------
AGL1
------>
ZmHOX2a(2)
<---------
MYB59
------->
RAV1(1)
<----------
DOF2
<---------------------
WRI1
---->
MYB46(3)
<----------
DOF2
---------->
DOF2
--------->
ANAC46
<----------
DOF2
aacataatttcacatatctctctttctttctcttgaaggaaagacgaagatctccaagtcccaa
gtacgtaactactttctccatctacattcaattgtt
9259700
<-------
GAMYB
<---------
MYB46(3)
<-----------
RAV1(2)
--------->
ANAC55(2)
--------->
ALFIN1
--------->
ANAC46
<-------
MYC3
----------->
GT1
<----------
DOF2
------->
MYC2
--------->
ANAC58
<---------
ANAC58
<---------
AHL20(2)
--------->
MYB111(2)
<---------
ANAC58
--------->
AHL20(2)
<--------
P
--------->
ANAC58
------>
ZmHOX2a(1)
<---------
AHL20(2)
<---------
WOX13(1)
------->
MYC3
<---------
ANAC55(2)
<
--------->
TOE2(3)
<-----------
GT1
<---------
AHL20(2)
<-------
MYC2
--------->
ZAT6
--------->
TOE2(2)
tctccttaatttctctagtacatatttacttgtgctataagtaattgattttatatcacccatgtgcag
gttgttaacacaagacgtaaac
atgggtcat
9259800
<------
MYB83
<------
MYB46(1)
----------------------->
TaNAC69(2)
=========================
MYC_MYB
<--------
P
--------->
bZIP60(1)
==========================
MYC_MYB
<-------
GAMYB
--------->
TGA1a
--------->
MYB55(2)
<---------
MYB46(3)
<---------
DEAR3(2)
<----------
DOF2
<---------
DEAR3(1)
<---------
O2
<---------
ANAC46
--------->
ANAC55(1)
<---------
ANAC58
<---------
bZIP60(1)
<---------
RAP2.6(2)
<---------
DAG2
<---------
DREB2C(2)
<---------
ALFIN1
<------
NtERF2
--------->
O2
<----
<------
ZmHOX2a(1)
------>
NtERF2
--------->
ANAC46
<-----
<------
MYB46(1)
------------>
AtMYB77
--------->
ANAC58
<-------
<------
MYB83
==============================
MYC_MYB
<-----
<--------
P
<---------
DEAR3(1)
<---------
TGA1a
---------
<---------
YAB1
--------->
ALFIN1
--------->
ANAC58
--------
--------->
ICU4
<---------
RAP2.6(2)
------->
GAMYB
<--------
<---------
YAB1
<---------
At4g35610
===============
MYC_MYB
------
--------->
YAB1
<---------
ANAC58
<---------
ARR14(2)
<---------
WRKY12
<--------
<---------
YAB1
<---------
ANAC58
--------->
ARR14(2)
<---------
WRKY38(1)
<---------
At5g28300
--------->
ICU4
<-----------
HVH21
--------->
At4g35610
<------
ZmHOX2a(2)
<-----------
GT1
---------
TOE1(2)
<---------
TOE2(3)
<-----------
HVH21
<---------
ANAC58
=================
bZIP_DOF
cttgggttcttagttatgattatggtaggagtcatggcttcttctgtgagcggctacggtggcggttggatcaacgctcacgccactttttacggtggtg
9259900
------>
NtERF2
--------->
HSFB2a(2)
<---------
HSFB2a(2)
--------->
ATERF1(2)
<---------
ATERF1(2)
--------->
ANAC46
<---------
LBD16
<---------
ANAC58
<---------
ANAC58
<
<---------
YAB1
<
-----
MYB46(3)
<
----
AtMYB61
<---------
MYB59
------
--
MYB46(3)
--------->
ANAC55(2)
<---------
ICU4
<-----
----
ANAC46
<-----------
GT1
--------->
YAB1
<------
MYB83
>
ALFIN1
--------->
LBD16
--------->
MYB52(2)
<---------
YAB1
<------
MYB46(1)
->
MYB55(2)
<---------
MYB52(1)
------>
ZmHOX2a(1)
<--------
-
DEAR3(1)
----------->
GT1
<---------
ANAC58
---------
--->
ALFIN1
------------>
MYB.PH3(1)
<---------
ANAC58
<-----------
GT1
<----------
DOF2
-
AtMYB61
----------->
GT1
<---------
AHL20(2)
--------->
YAB1
<-----------
GT1
<-
gtgatgcttccggcacaatgg
gtaaaaaccgttatttacataactcattccttacaaattatcatatttactaatcttcaatgttacttctttgtag
gtg
9260000
<-----------
ARR10
--------->
At4g35610
<------
NtERF2
<---------
ERF1
<---------
ATERF1(1)
------>
NtERF2
<---------
RRTF1(1)
<---------
DEAR3(2)
<---------
RAP2.3(1)
<---------
RAP2.3(2)
<---------
RAP2.6(2)
<---------
DEAR3(1)
--------->
CCA1(2)
<---------
RAP2.3(3)
<---
--------->
ARR14(2)
--------->
RAP2.6(3)
<---
<---------
ARR14(2)
<---------
ATERF1(1)
<-------
<---------
ANAC46
--------->
ANAC58
<-------
---------
ANAC58
--------->
ANAC58
<---------
MYB46(3)
---------
ANAC46
<---------
DEAR3(1)
--------->
ALFIN1
---------
ANAC58
--------->
ANAC46
<---------
AtMYB61
--->
ALFIN1
--------->
ZAT2
--------->
At4g35610
<---------
At4g35610
----
DEAR3(1)
----------->
HVH21
<---------
At4g35610
<---------
ZAT2
-
AtMYB61
--------->
ANAC55(2)
--------->
ZAT2
--------->
At4g35610
>
MYB111(1)
----------->
GT1
<---------
ANAC55(2)
<---------
ZAT2
--------->
ZAT2
<--
--------
MYB46(3)
<---------
LBD16
<---------
RRTF1(3)
------->
TEIL
<---------
ARR14(2)
gtgcttgtggatatggtaatctatatagccaaggctacgggacgagcacggcggctctaagcacagctctcttcaacaatggacttagctgtggttcttg
9260100
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AGI:
At1g26770.1
Description:
ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A10). Identical to Expansin-A10 precursor (EXPA10) [Arabidopsis Thaliana] (GB:Q9LDR9); similar to ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1) [Arabidopsis thaliana] (TAIR:AT1G69530.2); similar to ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1) [Arabidopsis thaliana] (TAIR:AT1G69530.1); similar to expansin [Pyrus pyrifolia] (GB:ABR04073.1); contains InterPro domain Expansin 45, endoglucanase-like (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A (InterPro:IPR005132); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Expansin; (InterPro:IPR002963); contain
Range:
from: 9259592
to: 9261300
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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