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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ALFIN1
--------->
ALFIN1
<---------
ANAC55(2)
<---------
ANAC58
<---------
ANAC46
--------->
O2
<---------
O2
--------->
TGA1a
--------->
ANAC55(2)
<---------
ANAC58
<---------
ARR14(2)
-------
ARR14(2)
<---------
TGA1a
--------->
YAB1
-----
------>
ARR14(2)
<---------
ANAC55(1)
--------->
WOX13(1)
<--------
------
CCA1(2)
<---------
MYB52(1)
--------->
YAB1
<---------
ALFIN1
------
ARR14(1)
<-----------
HVH21
<---------
YAB1
--------->
TOE2(3)
<---------
At5g28300
-
GT1
<---------
MYB52(1)
--------->
GLK1(1)
<-----------
GT1
--------->
ARR14(2)
<-----------
GT1
tatccaaattgtttatctgttaactgttacgtgtgggaactctatgatttagtttatccacattaatcagaccctcaaacatttacatttaccacctcct
3945300
<------
ZmHOX2a(2)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
CCA1(2)
<---------
ARR14(2)
--------->
ARR14(2)
<---------
AHL20(2)
<---------
ARR11(3)
--------->
AHL20(2)
--------->
LBD16
<---------
TOE2(3)
<---------
AHL20(2)
--------->
GLK1(1)
--------->
ATHB12
<---------
AHL20(1)
<---------
GLK1(2)
<---------
ANAC58
<---------
AHL20(2)
<---------
ARR14(2)
--------->
ANAC55(2)
--------->
AHL20(2)
--------->
ARR14(2)
<---------
ANAC58
--------->
CCA1(2)
->
ZmHOX2a(1)
<---------
At4g35610
--------->
GLK1(2)
---------->
DOF2
-
ALFIN1
--------->
ZAT14
<---------
LBD16
<---------
GLK1(2)
---------->
DOF2
tattttatttatttctaaatagaccccttcactattcagattcccagatatgagatcacagagattcttacttgatttgacgaaagacaaaagagatggt
3945400
<---------
ANAC46
<---------
ANAC55(1)
<---------
ANAC58
--------->
ANAC55(2)
<---------
ANAC58
<---------
ANAC46
<---------
ANAC55(2)
--------------->
AtSPL3
<----------
DOF2
--------------->
AtSPL8
<---------
DAG2
<-----------
GT1
--------->
AtLEC2
<--
<----------
DOF2
--------->
ANAC55(2)
<---------
ANAC58
--------
<-------
TEIL
--------->
ANAC58
<---------
ANAC58
---------
--------->
AHL20(2)
--------->
ANAC58
<----------
DOF2
--------->
AtLEC2
<---------
AHL20(2)
--------->
ANAC46
<---------
DAG2
<-----------
GT1
<--
ctaaattaaaaattcgtttgcgcttattagatggcagaatattaaacacattcacgaaattacgtactacctttcgtgcaaactttttccatccaaaagt
3945500
<-
-----
<----
<----
-----
-----
--------->
AHL20(1)
--------->
ANAC58
<---------
TOE1(3)
<----
<---------
AHL20(1)
--------->
ANAC58
<---------
GLK1(1)
<---------
TOE2(3)
--------
----
MYB83
------->
GAMYB
--------->
ZAT6
<---------
YAB1
--------->
YAB1
->
DAG2
<---------
AHL20(2)
--------->
ANAC58
<---------
AHL20(2)
----------->
GT1
->
DOF2
--------->
AHL20(2)
<---------
GLK1(2)
<------
ZmHOX2a(1)
--------->
AHL20(2)
--------->
ARR11(3)
----
MYB46(1)
--------->
MYB52(1)
--------->
ANAC58
--------->
AHL20(2)
<---------
ARR11(3)
tggttttatatattaaatccaacggtggaaagaaactctatcaaacaaggaccactagatttcagaaattaaaattagggtttattagatattgataata
3945600
<---------
ANAC58
<---------
ANAC58
<---------
ANAC46
--------
AHL20(2)
---->
ARR11(3)
--------->
ATHB12
-----
AHL20(1)
<---------
YAB1
----
-----
AHL20(2)
--------->
ICU4
<---------
AHL20(2)
<---
---->
AHL20(1)
<---------
ICU4
--------->
AHL20(2)
--------->
At4g35610
---->
AHL20(2)
--------->
ICU4
<---------
ARR11(3)
<---------
At4g35610
-----
ARR11(3)
--------->
YAB1
--------->
ARR11(3)
<----------
DOF2
<----
->
AHL20(2)
<-------
TEIL
<---------
TOE2(3)
<-----------
GT1
<---------
At4g35610
--
tattatggggtgtttttgtaagaaattcataatgagtggtatagttgagattttatttgtcatttcacattcttttggactcttctgcttacaaaaatgc
3945700
--------->
YAB1
<---------
ICU4
--------->
ANAC55(2)
--------->
YAB1
<---------
ANAC55(2)
--------->
ARR11(3)
---
----------->
AGL15
--------->
AHL20(2)
<---------
ARR11(3)
---
------------
AGL15
<---------
AHL20(2)
--------->
YAB1
<--
-------------
AGL2
---------->
DOF2
<-----------
GT1
<---------
YAB1
<--
--------->
TBP
<---------
MYB52(1)
*
TSS
<---------
ARR11(3)
<---------
TOE2(3)
---------
tatatatagtcgtccatttcccttcgtttaaaactt
atagcgaaatctctaattacttaatctctgaatgcttaagataataactataatctaagagtaa
3945800
<----------
CDC5
--------->
MYB52(1)
----------->
GT1
----------->
HVH21
--------->
AHL20(2)
----------->
TGA1
<---------
AHL20(2)
--------->
ZAT2
------>
AHL20(2)
----------->
GT1
--------->
At4g35610
------>
AHL20(1)
<---------
TOE2(3)
<---------
At4g35610
<
-------
AHL20(1)
<---------
TOE1(3)
<---------
ZAT2
--------
-------
AHL20(2)
xxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
<---
-->
GT1
<---------
MYB46(3)
---------->
DOF2
---------->
DOF2
--------
ttaattaaacgataagtggttaaatttgttgaggttaaaagtgaagcttca
atggcaagaggtcgaaagctgacgatgagccagagcgagaggtacctag
3945900
--------->
DEAR3(1)
----------->
HVH21
--------->
DREB2C(2)
--------->
At1g77200
------->
GAMYB
--------->
DEAR3(2)
--------->
MYB46(3)
<---------
ATERF1(1)
<---------
ALFIN1
--------->
MYB46(3)
------>
NtERF2
<---------
ATERF1(1)
<-----------
HVH21
---------
--------->
LBD16
<-----------
HVH21
--------->
ANAC58
<---------
ETT(2)
<---------
HSFB2a(1)
<------
NtERF2
--------->
HSFB2a(1)
------>
NtERF2
<
<---------
HSFC1(2)
--------->
DEAR3(1)
<
--------->
ARR14(2)
xxxxxxxxxxxxxxxxxxx
<---------
ARR14(2)
<------
ZmHOX2a(1)
<---------
ANAC46
-
<---------
GLK1(2)
==============================
HOX2a_HOX2a
------->
GAMYB
<------
NtERF2
<------
ZmHOX2a(1)
--------->
ANAC46
--
----------->
HVH21
--------->
ANAC46
--------->
ANAC46
--------->
ANAC58
----
--------->
At5g28300
--------->
ANAC58
<---------
LBD16
--------->
ANAC58
-----
--------->
At4g35610
>>>>>>>>>
MYB98
------>
NtERF2
----------->
HVH21
<---------
ALFIN1
<-----
xxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
--------->
DEAR3(1)
--------->
MYB52(1)
<xxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
---------
At4g35610
--------->
MYB52(1)
<---------
At4g35610
<-----------
HVH21
<xxxxxxxxx
->
TOE2(2)
<---------
ANAC46
--------->
HSFC1(2)
--------->
ZAT2
<---------
At4g35610
<------
ZmHOX2a(2)
---
ZmHOX2a(1)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
--------->
At4g35610
xxxxxxxxxxxxxxxxxxxx>
smallRNA(l2)
->
TOE1(2)
<---------
At5g28300
<---------
LBD16
--------->
YAB1
=================================
HOX2a_HOX2a
gaagcagctatagttacggtgacagtaacggaaactccgccaccgacgaatcagagctcacggaggaggacatctggtcacacgccgtcgatcacagccc
3946000
<---------
ANAC58
--------->
MYB55(2)
<---------
MYB46(3)
<---------
AtMYB61
<---------
MYB46(3)
<------
MYB83
<------
MYB46(1)
--------->
ALFIN1
<---------
AtMYB61
<---------
DEAR3(1)
<---------
MYB46(3)
<---------
DEAR3(1)
--------->
ALFIN1
------->
MYC2
<-------
MYC2
<-------
MYC3
------->
MYC3
<-------
PIF5
<-------
=================================
MYC_MYB
<---------
ANAC46
<-------
<---------
ANAC58
<-------
GAMYB
<---------
GLK1(2)
<---------
TGA1a
<---------
ANAC58
--------->
GLK1(2)
<------
NtERF2
<---------
ANAC58
>
DEAR3(1)
<---------
ANAC58
<---------
ANAC46
---------
GLK1(1)
--------->
ANAC58
--------->
TGA1a
<------
NtERF2
---------
---------
At4g35610
--------->
ANAC55(2)
------>
NtERF2
<---------
ANAC58
<------
ZmHOX2a(1)
x>
smallRNA(le3)
--------->
ANAC46
<---------
ANAC58
--------->
ATERF1(1)
----
-------->
GLK1(1)
--------->
ANAC58
xxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
=============
------->
ARR14(2)
--------->
ALFIN1
<------
ZmHOX2a(1)
<xxxxxxxxxxxxxxxxxxxxx
smallRNA(le3)
----->
LBD16
<---------
ANAC58
<---------
AtMYB61
------->
PIF5
<-----------
RAV1(1)
---------
---->
LBD16
<---------
ANAC58
--------->
ALFIN1
--------->
ALFIN1
<---------
At4g35610
<---
----
LBD16
xxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
<---------
ANAC46
--------->
MYB55(2)
------>
NtERF2
---------
xxxxxxx
smallRNA(s)
<---------
ANAC46
<---------
ANAC46
<---------
ANAC58
--------->
MYB52(2)
---------
ggagatgctggaatctcatggagcgtggaacacacgcgatgctgtggtgaggaatgggcgcgtgggtggtggtttgtcgctggcgtttgaggacgcgtca
3946100
<----
<----
----------->
HVH21
------
<---------
O2
--------
<---------
ANAC58
--------
--------->
TGA1a
<-------
<---------
ANAC55(2)
<--------
--------->
ANAC55(2)
<--------
<---------
ANAC55(1)
------>
NtERF2
<---------
TGA1a
<--------
--------->
O2
<---------
RAP2.3(3)
<---------
ANAC46
xxxxxxxxxx
<---------
ANAC58
<---------
DEAR3(1)
<-------
TEIL
<------
NtERF2
<---------
ZAT18
--------->
ATERF1(1)
<---------
ZAT14
<------
ZmHOX2a(1)
<---------
ATERF1(1)
--------->
ZAT18
<------
NtERF2
<-----------
HVH21
--------->
ZAT14
--------->
ATERF1(1)
<---------
SPL7
<---------
ANAC58
--------->
LBD16
<---------
O2
<---------
ANAC58
<---------
ANAC46
<---------
DEAR3(1)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
--------->
O2
==============================
HOX2a_HOX2a
<---------
ANAC46
--------->
ATERF1(1)
------>
NtERF2
<---------
GLK1(2)
--------->
ALFIN1
<------
NtERF2
--------->
LBD16
--------->
ARR14(2)
<---------
MYB46(3)
<-----------
HVH21
--------->
DEAR3(1)
--------->
CCA1(2)
--------->
ALFIN1
<---------
ANAC58
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
<---------
DEAR3(1)
<---------
ANAC46
----
HVH21
------>
ZmHOX2a(2)
<---------
ANAC58
<---------
AtMYB61
<---------
ANAC58
----
TGA1
--------->
ARR11(3)
<---------
DEAR3(1)
--------->
ALFIN1
<---------
At4g35610
>
ANAC58
--------->
ARR14(2)
<------
NtERF2
<---------
AtMYB61
--------->
ZAT2
<------
----->
At4g35610
<---------
ARR14(2)
--------->
ALFIN1
--------->
At4g35610
=================
HOX2a_HOX2a
<---------
ANAC58
<------
ZmHOX2a(1)
<---------
ZAT2
-------
>
ANAC58
<---------
ARR14(2)
<---------
LBD16
--------->
ALFIN1
<------
ZmHOX2a(1)
<------
NtERF2
-
------
At4g35610
----------->
RAV1(1)
<------
ZmHOX2a(1)
--------->
ALFIN1
<-------
GAMYB
<------
NtERF2
>
ANAC46
<------
ZmHOX2a(1)
--------->
ALFIN1
<------
ZmHOX2a(1)
<------
ZmHOX2a(1)
<---------
MYB46(3)
---
>
bZIP60(2)
====================================
HOX2a_HOX2a
<------
ZmHOX2a(1)
------------>
AtMYB77
<----
tcttcgccgaggatcgtgcaccagatacgtggcggaggagaaggaggaggaggtggtggaggaggaggaagagttgagaggcagttggcgtcgtcggctc
3946200
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AGI:
At1g11700.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61930.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17934.1); contains InterPro domain Protein of unknown function DUF584 (InterPro:IPR007608)
Range:
from: 3945737
to: 3946613
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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