Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->ALFIN1                            --------->ALFIN1                          <---------ANAC55(2)                          <---------ANAC58                          <---------ANAC46                          --------->O2                          <---------O2                          --------->TGA1a                          --------->ANAC55(2)                          <---------ANAC58                         <---------ARR14(2) -------ARR14(2)          <---------TGA1a                       --------->YAB1                  ----- ------>ARR14(2)          <---------ANAC55(1)                --------->WOX13(1)             <-------- ------CCA1(2)         <---------MYB52(1)                    --------->YAB1              <---------ALFIN1 ------ARR14(1)       <-----------HVH21  <---------YAB1   --------->TOE2(3)            <---------At5g28300 -GT1           <---------MYB52(1) --------->GLK1(1)<-----------GT1--------->ARR14(2) <-----------GT1   tatccaaattgtttatctgttaactgttacgtgtgggaactctatgatttagtttatccacattaatcagaccctcaaacatttacatttaccacctcct  3945300                                                    <------ZmHOX2a(2)                                                   <---------ARR11(3)                                                   --------->ARR11(3)                                             --------->CCA1(2)                                            <---------ARR14(2)                                            --------->ARR14(2)      <---------AHL20(2)                    <---------ARR11(3)      --------->AHL20(2)                  --------->LBD16                   <---------TOE2(3)     <---------AHL20(2)              --------->GLK1(1)                --------->ATHB12 <---------AHL20(1)                 <---------GLK1(2)              <---------ANAC58 <---------AHL20(2)                 <---------ARR14(2)             --------->ANAC55(2) --------->AHL20(2)                 --------->ARR14(2)             <---------ANAC58        --------->CCA1(2) ->ZmHOX2a(1)                      <---------At4g35610       --------->GLK1(2)        ---------->DOF2 -ALFIN1                 --------->ZAT14<---------LBD16     <---------GLK1(2)  ---------->DOF2   tattttatttatttctaaatagaccccttcactattcagattcccagatatgagatcacagagattcttacttgatttgacgaaagacaaaagagatggt  3945400                                                                       <---------ANAC46                                                           <---------ANAC55(1)                                                           <---------ANAC58                                                           --------->ANAC55(2)                                                           <---------ANAC58                                                           <---------ANAC46                                                           <---------ANAC55(2)                                                          --------------->AtSPL3<----------DOF2                                                          --------------->AtSPL8<---------DAG2                                                         <-----------GT1 --------->AtLEC2         <--                    <----------DOF2                --------->ANAC55(2) <---------ANAC58      --------          <-------TEIL                             --------->ANAC58    <---------ANAC58     ---------   --------->AHL20(2)                              --------->ANAC58 <----------DOF2     --------->AtLEC2   <---------AHL20(2)                              --------->ANAC46<---------DAG2  <-----------GT1<--   ctaaattaaaaattcgtttgcgcttattagatggcagaatattaaacacattcacgaaattacgtactacctttcgtgcaaactttttccatccaaaagt  3945500                                                                                                   <-                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                -----      --------->AHL20(1)   --------->ANAC58                               <---------TOE1(3)     <----      <---------AHL20(1)   --------->ANAC58             <---------GLK1(1) <---------TOE2(3)  -------- ----MYB83          ------->GAMYB                --------->ZAT6     <---------YAB1        --------->YAB1 ->DAG2    <---------AHL20(2)               --------->ANAC58       <---------AHL20(2)    ----------->GT1 ->DOF2   --------->AHL20(2) <---------GLK1(2)<------ZmHOX2a(1)    --------->AHL20(2)--------->ARR11(3) ----MYB46(1)    --------->MYB52(1)         --------->ANAC58      --------->AHL20(2) <---------ARR11(3)   tggttttatatattaaatccaacggtggaaagaaactctatcaaacaaggaccactagatttcagaaattaaaattagggtttattagatattgataata  3945600     <---------ANAC58     <---------ANAC58     <---------ANAC46 --------AHL20(2) ---->ARR11(3)                --------->ATHB12 -----AHL20(1)               <---------YAB1                                                      ---- -----AHL20(2)               --------->ICU4      <---------AHL20(2)                              <--- ---->AHL20(1)             <---------ICU4        --------->AHL20(2)                --------->At4g35610 ---->AHL20(2)            --------->ICU4      <---------ARR11(3)                   <---------At4g35610 -----ARR11(3)          --------->YAB1        --------->ARR11(3)     <----------DOF2            <---- ->AHL20(2)            <-------TEIL         <---------TOE2(3) <-----------GT1   <---------At4g35610--   tattatggggtgtttttgtaagaaattcataatgagtggtatagttgagattttatttgtcatttcacattcttttggactcttctgcttacaaaaatgc  3945700                                                                                 --------->YAB1                                                                              <---------ICU4                                                    --------->ANAC55(2)    --------->YAB1                                                    <---------ANAC55(2)  --------->ARR11(3)       --- ----------->AGL15                                --------->AHL20(2)     <---------ARR11(3)       --- ------------AGL15                                <---------AHL20(2)    --------->YAB1            <-- -------------AGL2               ---------->DOF2  <-----------GT1      <---------YAB1             <-- --------->TBP     <---------MYB52(1)*TSS<---------ARR11(3)            <---------TOE2(3)    ---------   tatatatagtcgtccatttcccttcgtttaaaacttatagcgaaatctctaattacttaatctctgaatgcttaagataataactataatctaagagtaa  3945800                                                                        <----------CDC5                                                                    --------->MYB52(1)              ----------->GT1                                      ----------->HVH21  --------->AHL20(2)                                               ----------->TGA1  <---------AHL20(2)                                             --------->ZAT2 ------>AHL20(2)             ----------->GT1                     --------->At4g35610 ------>AHL20(1)            <---------TOE2(3)                    <---------At4g35610                < -------AHL20(1)            <---------TOE1(3)                    <---------ZAT2              -------- -------AHL20(2)           xxxxxxxxxxxxxxxx>smallRNA(se3)      xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<--- -->GT1       <---------MYB46(3)  ---------->DOF2             ---------->DOF2                --------   ttaattaaacgataagtggttaaatttgttgaggttaaaagtgaagcttcaatggcaagaggtcgaaagctgacgatgagccagagcgagaggtacctag  3945900                                        --------->DEAR3(1)                                        ----------->HVH21                                        --------->DREB2C(2)                                        --------->At1g77200                                        ------->GAMYB                                       --------->DEAR3(2)                                       --------->MYB46(3)                                      <---------ATERF1(1)                                     <---------ALFIN1                                    --------->MYB46(3)                                   ------>NtERF2                                   <---------ATERF1(1)                                   <-----------HVH21                                        ---------                                   --------->LBD16                                     <-----------HVH21                                  --------->ANAC58                                   <---------ETT(2)                              <---------HSFB2a(1)                                   <------NtERF2                              --------->HSFB2a(1)                                  ------>NtERF2    <                              <---------HSFC1(2)                                  --------->DEAR3(1)<                            --------->ARR14(2)                                    xxxxxxxxxxxxxxxxxxx                            <---------ARR14(2)                   <------ZmHOX2a(1)<---------ANAC46  -                            <---------GLK1(2)                    ==============================HOX2a_HOX2a                          ------->GAMYB<------NtERF2          <------ZmHOX2a(1)--------->ANAC46    --                ----------->HVH21 --------->ANAC46       --------->ANAC46      --------->ANAC58  ----               --------->At5g28300--------->ANAC58      <---------LBD16        --------->ANAC58 -----   --------->At4g35610  >>>>>>>>>MYB98------>NtERF2   ----------->HVH21      <---------ALFIN1  <-----   xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)--------->DEAR3(1)--------->MYB52(1)    <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ---------At4g35610    --------->MYB52(1)           <---------At4g35610  <-----------HVH21 <xxxxxxxxx ->TOE2(2)   <---------ANAC46 --------->HSFC1(2)    --------->ZAT2   <---------At4g35610<------ZmHOX2a(2) ---ZmHOX2a(1)xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    --------->At4g35610 xxxxxxxxxxxxxxxxxxxx>smallRNA(l2) ->TOE1(2)  <---------At5g28300  <---------LBD16--------->YAB1=================================HOX2a_HOX2a   gaagcagctatagttacggtgacagtaacggaaactccgccaccgacgaatcagagctcacggaggaggacatctggtcacacgccgtcgatcacagccc  3946000                                                                     <---------ANAC58                                                                   --------->MYB55(2)                                                                   <---------MYB46(3)                                                                  <---------AtMYB61                                                                <---------MYB46(3)                                                                <------MYB83                                                                <------MYB46(1)                                                               --------->ALFIN1                                                               <---------AtMYB61                                                               <---------DEAR3(1)                                                            <---------MYB46(3)                                                            <---------DEAR3(1)                                                           --------->ALFIN1                                                          ------->MYC2                                                          <-------MYC2                                                          <-------MYC3                                                          ------->MYC3                                                          <-------PIF5                       <-------                                                         =================================MYC_MYB                                                         <---------ANAC46                    <-------                                                         <---------ANAC58         <-------GAMYB        <---------GLK1(2)                                <---------TGA1a        <---------ANAC58  --------->GLK1(2)                                      <------NtERF2          <---------ANAC58 >DEAR3(1)                                               <---------ANAC58       <---------ANAC46 ---------GLK1(1)              --------->ANAC58          --------->TGA1a       <------NtERF2--------- ---------At4g35610            --------->ANAC55(2)      ------>NtERF2<---------ANAC58   <------ZmHOX2a(1) x>smallRNA(le3)               --------->ANAC46        <---------ANAC58     --------->ATERF1(1)  ---- -------->GLK1(1)              --------->ANAC58   xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    ============= ------->ARR14(2)     --------->ALFIN1          <------ZmHOX2a(1)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ----->LBD16        <---------ANAC58     <---------AtMYB61------->PIF5 <-----------RAV1(1)  --------- ---->LBD16         <---------ANAC58     --------->ALFIN1--------->ALFIN1  <---------At4g35610   <--- ----LBD16xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------ANAC46--------->MYB55(2)------>NtERF2 --------- xxxxxxxsmallRNA(s) <---------ANAC46   <---------ANAC46<---------ANAC58--------->MYB52(2)   ---------   ggagatgctggaatctcatggagcgtggaacacacgcgatgctgtggtgaggaatgggcgcgtgggtggtggtttgtcgctggcgtttgaggacgcgtca  3946100                                                                                                <----                                                                                                <----                          ----------->HVH21                                                    ------                        <---------O2                                                         --------                        <---------ANAC58                                                     --------                        --------->TGA1a                                                      <-------                        <---------ANAC55(2)                                                 <--------                        --------->ANAC55(2)                                                 <--------                        <---------ANAC55(1)                                                 ------>NtERF2                        <---------TGA1a                                                     <--------                        --------->O2                                                       <---------RAP2.3(3)                        <---------ANAC46                                                   xxxxxxxxxx                        <---------ANAC58                                                   <---------DEAR3(1)                       <-------TEIL                                                       <------NtERF2              <---------ZAT18                                                             --------->ATERF1(1)              <---------ZAT14     <------ZmHOX2a(1)                                      <---------ATERF1(1)              --------->ZAT18  <------NtERF2                                             <-----------HVH21              --------->ZAT14  --------->ATERF1(1)                                       <---------SPL7           <---------ANAC58   --------->LBD16                                           <---------O2           <---------ANAC58  <---------ANAC46                                           <---------DEAR3(1)           xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                           --------->O2           ==============================HOX2a_HOX2a <---------ANAC46                  --------->ATERF1(1)     ------>NtERF2   <---------GLK1(2)               --------->ALFIN1                  <------NtERF2     --------->LBD16 --------->ARR14(2)            <---------MYB46(3)                 <-----------HVH21    --------->DEAR3(1)--------->CCA1(2)           --------->ALFIN1                   <---------ANAC58 xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)              <---------DEAR3(1)                 <---------ANAC46 ----HVH21 ------>ZmHOX2a(2) <---------ANAC58     <---------AtMYB61                  <---------ANAC58 ----TGA1--------->ARR11(3)  <---------DEAR3(1)--------->ALFIN1                 <---------At4g35610 >ANAC58 --------->ARR14(2) <------NtERF2      <---------AtMYB61                --------->ZAT2<------ ----->At4g35610     <---------ARR14(2)  --------->ALFIN1                       --------->At4g35610 =================HOX2a_HOX2a<---------ANAC58 <------ZmHOX2a(1)                 <---------ZAT2------- >ANAC58 <---------ARR14(2) <---------LBD16 --------->ALFIN1    <------ZmHOX2a(1)   <------NtERF2   - ------At4g35610----------->RAV1(1)     <------ZmHOX2a(1)  --------->ALFIN1     <-------GAMYB<------NtERF2 >ANAC46<------ZmHOX2a(1) --------->ALFIN1 <------ZmHOX2a(1) <------ZmHOX2a(1) <---------MYB46(3) --- >bZIP60(2)====================================HOX2a_HOX2a<------ZmHOX2a(1) ------------>AtMYB77<----   tcttcgccgaggatcgtgcaccagatacgtggcggaggagaaggaggaggaggtggtggaggaggaggaagagttgagaggcagttggcgtcgtcggctc  3946200  Previous    Next  AGI:  At1g11700.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61930.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17934.1); contains InterPro domain Protein of unknown function DUF584 (InterPro:IPR007608) Range:  from: 3945737    to: 3946613    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.