Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                ------>NtERF2                                                                                             <-------                                                                                            <--------                                                                                            <------NtERF2                                                                                            ------>NtERF2                                                                                           <---------RRTF1(1)                        ------>NtERF2                                                     <---------RRTF1(2)                        <---------ERF1                                                    <---------RAP2.3(3)                        <---------RAP2.3(1)                                               <---------RRTF1(3)                        <<<<<<<<<AtERF-4                                                  <---------RAP2.3(2)                        <<<<<<<<<AtERF-5                                             <-------GAMYB                        <---------MYB46(3)                                          <---------DEAR3(2)                        <<<<<<<<<AtERF-1                                            --------->MYB55(2)                        <<<<<<<<<AtERF-2                                          ------>NtERF2                        <<<<<<<<<AtERF-3                                          <------NtERF2<-----                       <---------RAP2.3(3)                                       <---------RAP2.3(1)                       --------->ATERF1(2)                                       <---------RRTF1(1)                       <---------ATERF1(2)                                      <---------RRTF1(2)                       <---------RAP2.3(2)                                      <---------ANAC58                   ------->MYC3              --------->ARR14(2)                 <---------ANAC46                   <-------MYC3            --------->LBD16                      <---------RRTF1(3)           <---------At4g35610            --------->ANAC46                      <---------ANAC58           --------->At4g35610        <---------GLK1(1)                         <---------RAP2.3(3)      <---------ZAT2   <---------RAP2.6(2)<---------HSFB2a(2)                   <---------RAP2.3(2)      --------->At4g35610--------->ATERF1(1) <---------ARR14(2)                 <---------RAP2.6(2)      <---------At4g35610<------NtERF2--------->GLK1(1)                         <---------DEAR3(1)      --------->ZAT2   <---------ANAC46------>ZmHOX2a(2)                --------->ANAC55(2)<---------RAP2.3(1)   --------->ZAT2 <---------O2       <---------ARR11(3)                ------->TEIL<---------ANAC46   <---------At4g35610 <---------DEAR3(1) --------->HSFB2a(2)          <---------LBD16<----------DOF2   <---------ZAT2 --------->O2       <---------ARR14(2)              <---------SPL7<---------DEAR3(1)   --------->At4g35610<------NtERF2  --------->ARR14(2)             <---------HSFB2a(1)   <---------DEAR3(1)  --------->ARR14(2)  --------->RAP2.6(3)<---------LBD16           <---------------AtSPL8 <---------RAP2.6(2)  <---------ARR14(2)--------->ALFIN1 --------->ARR11(3)            <---------------AtSPL3<---------LBD16 ----->MYB52(1)   --------->TGA1a    <---------AGP1                <---------KAN4(2)<---------MYB46(3) ------ARR14(2)   <---------TGA1a   <---------CCA1(2)        ---------->DOF2   <---------LBD16-------   atcggagctgctgagatgaaacgtggcggctagggtttggatctccggaaactgagtcgtctccaaaggaatgtacgggattgcggcggtttgcggcggg  3271600                                                                                <----------DOF2                                                                           ------->GAMYB                                                                          --------->ANAC58                                                                          --------->ANAC46                                                                          --------->ANAC58                                                                         <---------------------WRI1                                                     --------->ZAT2     --------->MYB52(1)                                                     <---------ZAT2    ----------->HVH21                                                     --------->GLK1(1)--------->DOF5.7(2)                                                     <---------At4g35610<---------DOF5.7(2)                                               --------->MYB52(1)    ------>NtERF2                                              ----------->HVH21      <---------At4g35610         ---- --ANAC46                                     --------->ANAC58       --------->At4g35610        ----- -LBD16                                       --------->ANAC46      --------->DEAR3(1)     <------MYB83 -NtERF2                                      --------->ANAC58   --------->ANAC46   ---------->DOF2 -->LBD16       <-----------GT1     --------->MYB52(1)   <-------GAMYB<---------MYB52(2)   <------MYB46(1)   aagtttttgagtttgattttacaaaaacaaggagaagacgacggatgcacgacggagctcgttgtcttcgccgctaacggaactttcaaagctaggttcc  3271700                                     --------->ANAC58                                     --------->ANAC58                           ------>ZmHOX2a(2)                           <-------TEIL                          <------ZmHOX2a(2)                         <---------ARR14(2)                         --------->ARR14(2)                      --------->ANAC58               <---------TOE1(3)            ---------->DOF2 ----->LBD16 --------->ATHB12        --------->YAB1  <---------TOE2(3)      <------ZmHOX2a(1) ---->HSFB2a(2)       --------->ANAC58          --------->WOX13(1)   --------->CCA1(2)       <-------   cgattgtaagacggatgaatggacaaggatccatttcaatcgcaacgagtcaattagggtttttcagagagagacggaggaagagaaagagaaggaaatg  3271800                                                                                         ----------->TGA1                                                   --------->CCA1(2)                     ----------->HVH21               <------ZmHOX2a(1)         <-----------------------TaNAC69(2)       --------->DAG2     --------->DAG2                    <---------ARR14(2)                        ---------->DOF2    ---------->DOF2                    --------->ARR14(2)                  ---------->DOF2         -- --GLK1(1)   <---------TOE2(3)        <------ZmHOX2a(1)                --------->MYB59 --------->At4g35610   tgaacaaaaagggtttaggaagagttcgacattaatggcaggaaccgttcaagagacgatgacttaggggaattaggcaaaggaaaaggaggtgacgacg  3271900                                    --------->MYB52(1)                                    ------>MYB83                                  <---------MYB111(1)                                  <---------MYB59                              --------->ANAC46                              --------->ANAC58                         --------->ARR14(2)                         <---------ARR14(2)                      <---------ANAC46                     --------->ATERF1(1)                     <------NtERF2--------->AtMYB61            --------->AHL20(2)--------->ANAC58    --------->At4g35610           <----------DOF2  <-----------GT1       <---------At4g35610       <------NtERF2 --------->RAP2.3(1)       <------ZmHOX2a(1)   --------->ANAC46 ------>NtERF2 <---------MYB46(2)   --------->ANAC58 <---------RAP2.3(1)--------->ATHB12                      ------->TEIL   --------->ANAC58<---------DEAR3(1) --------->MYB46(3)                <---------ANAC46          <-- -------->DOF2  <-----------RAV1(1) ------>MYB46(1)                 <----------DOF2      *TSS  ------   ataaaacgcagcgttttaatggcgccgtattcacgacctaaccattggaggaagcagtcgtcttcttggtctttctgtgtatgtctctggtttttaagtg  3272000              ------------>CBF           --------->ANAC58                                        ----------------->AGL1       --------->ANAC46       =======================================================MADS_MADS       --------->ANAC58       --------------->AGL15      --------->At4g35610                     ----       --------->ANAC58      <-----------------AGL1     --------->MYB52(2)   ------------>CBF <------   --------->ANAC58         ---------->ID1            <---------MYB52(1)<------------CBF    ---------   --------->ANAC58 <-----------GT1  <-----------GT1<---------ANAC58 ------>ZmHOX2a(1)     <---------YAB1 --------ID1 --------->YAB1 <-----------GT1         <---------ANAC58--------->TOE2(3)   --------->ICU4 --->ALFIN1--------->ANAC58<-----------GT1       <----------DOF2   ----------------->AG<----------DOF2   gagacaaacaagcaagcacaatttacatttttcccatttttgcattccctcctttcgtttgctgtattttcctaaattgtccaattcgcctttattatac  3272100                   ------>MYB46(1)                 <---------MYB111(1)                 <---------MYB59                 --------->MYB46(3)                 <---------MYB46(2)           --------------->AtSPL8                                              --------->MYB46(3)           <---------------AtSPL8                                      --------->ANAC58       <---------YAB1      --------->AHL20(2)             <---------YAB1    --------->REM1(1)   <----------DOF2 ------>MYB83                 <---------DAG2      <---------MYB52(1)   --------->TOE2(3)       <---------AHL20(2)   <----------DOF2    <-------GAMYB ----->AtMYB61   --------->AtMYB61    <----------DOF2    --------->AHL20(2)<-------TEIL -----GT1  --------------->AtSPL3  ---------->ID1     --------->TOE2(3)--------->ANAC58        ------ >YAB1--------->YAB1  --------->TOE2(3)        <---------DAG2     ----------->GT1  --------->DEAR3(1)   cacaactttaatattggtaccaaacctttttaattttgttctttaatcccctttttcattaatatagacggttaagctacatccaccgatgaaaaaatca  3272200                                                                    --------->KAN4(2)                                                                   <---------KAN4(1)                                                    <---------YAB1 --------->KAN4(1)          --------->AHL20(2)                      ----------->GT1  <----------TaMYB80             <--          <---------AHL20(2)              ---------->DOF2         ------->TEIL     --------->YAB1<---      --------->ICU4                   ----------->GT1 <---------YAB1      <---------ICU4 ---------->DOF2 --->ATHB12   <-----------GT1  --------->ANAC46------------>MYB.PH3(2)    <---------MYB52(1)     ----   tttgaataatttttaattacattctataactataagtcatgttgtaaagagtttgttattagagcatgaatattccattattctctcataaaaaaagaat  3272300                                                                                  <---------REM1(1)                                                                                  <---------ANAC46                                                                               <---------ATHB12                                                                            --------->ICU4                                                                       ----------->GT1     <---------ANAC58             ---------->ID1              <---------ZAT18               --------->YAB1      <---------ANAC58 -------AHL20(2)                         --------->ZAT18          <---------MYB52(1)       ---------- ------AHL20(2)            <---------AHL20(2)                    --------->LBD16--------->YAB1 ----->AHL20(2)        <----------DOF2  --------->ATERF1(1)    <---------LBD16 --------->ICU4   taaatgagaaaatttgtccctaattcttttttatttcaagtagccccctaaattgtggctaaacatccggtaatcgtaacaatgatgtagattgggtaac  3272400                                                                                                    -                                                                                              <------                                                                                              -------                                                                                              -------                                                                                             <-------                                                                                             --------                                                                                            <--------                                                                                           --------->ANAC55(2)                                                                                           <---------ANAC55(2)                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                                                                          -----------                                                                                          <-------TEIL              <---------ANAC46                                                            <----------  --------->ZAT2 --------------->AGL15                                                    <----------  --------->At4g35610                                                                --------->AHL20(2)  <---------ZAT2 <---------------AGL15 <----------DOF2                              --------->AHL20(2) ->GT1     ----------->HVH21    <---------TOE2(3)               <-----------GT1     <---------AHL20(2)   tctctgctcgaatgtgacgcttattttggcaaataatgtttctttggtaaacatttgaaagtttttaaacaatttgttttgagtatttaaaatacgtacg  3272500  Previous    Next  AGI:  At1g10020.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G29310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61535.1); contains InterPro domain Protein of unknown function DUF1005 (InterPro:IPR010410) Range:  from: 3269606    to: 3271989    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version