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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
------>
NtERF2
<-------
<--------
<------
NtERF2
------>
NtERF2
<---------
RRTF1(1)
------>
NtERF2
<---------
RRTF1(2)
<---------
ERF1
<---------
RAP2.3(3)
<---------
RAP2.3(1)
<---------
RRTF1(3)
<<<<<<<<<
AtERF-4
<---------
RAP2.3(2)
<<<<<<<<<
AtERF-5
<-------
GAMYB
<---------
MYB46(3)
<---------
DEAR3(2)
<<<<<<<<<
AtERF-1
--------->
MYB55(2)
<<<<<<<<<
AtERF-2
------>
NtERF2
<<<<<<<<<
AtERF-3
<------
NtERF2
<-----
<---------
RAP2.3(3)
<---------
RAP2.3(1)
--------->
ATERF1(2)
<---------
RRTF1(1)
<---------
ATERF1(2)
<---------
RRTF1(2)
<---------
RAP2.3(2)
<---------
ANAC58
------->
MYC3
--------->
ARR14(2)
<---------
ANAC46
<-------
MYC3
--------->
LBD16
<---------
RRTF1(3)
<---------
At4g35610
--------->
ANAC46
<---------
ANAC58
--------->
At4g35610
<---------
GLK1(1)
<---------
RAP2.3(3)
<---------
ZAT2
<---------
RAP2.6(2)
<---------
HSFB2a(2)
<---------
RAP2.3(2)
--------->
At4g35610
--------->
ATERF1(1)
<---------
ARR14(2)
<---------
RAP2.6(2)
<---------
At4g35610
<------
NtERF2
--------->
GLK1(1)
<---------
DEAR3(1)
--------->
ZAT2
<---------
ANAC46
------>
ZmHOX2a(2)
--------->
ANAC55(2)
<---------
RAP2.3(1)
--------->
ZAT2
<---------
O2
<---------
ARR11(3)
------->
TEIL
<---------
ANAC46
<---------
At4g35610
<---------
DEAR3(1)
--------->
HSFB2a(2)
<---------
LBD16
<----------
DOF2
<---------
ZAT2
--------->
O2
<---------
ARR14(2)
<---------
SPL7
<---------
DEAR3(1)
--------->
At4g35610
<------
NtERF2
--------->
ARR14(2)
<---------
HSFB2a(1)
<---------
DEAR3(1)
--------->
ARR14(2)
--------->
RAP2.6(3)
<---------
LBD16
<---------------
AtSPL8
<---------
RAP2.6(2)
<---------
ARR14(2)
--------->
ALFIN1
--------->
ARR11(3)
<---------------
AtSPL3
<---------
LBD16
----->
MYB52(1)
--------->
TGA1a
<---------
AGP1
<---------
KAN4(2)
<---------
MYB46(3)
------
ARR14(2)
<---------
TGA1a
<---------
CCA1(2)
---------->
DOF2
<---------
LBD16
-------
atcggagctgctgagatgaaacgtggcggctagggtttggatctccggaaactgagtcgtctccaaaggaatgtacgggattgcggcggtttgcggcggg
3271600
<----------
DOF2
------->
GAMYB
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
<---------------------
WRI1
--------->
ZAT2
--------->
MYB52(1)
<---------
ZAT2
----------->
HVH21
--------->
GLK1(1)
--------->
DOF5.7(2)
<---------
At4g35610
<---------
DOF5.7(2)
--------->
MYB52(1)
------>
NtERF2
----------->
HVH21
<---------
At4g35610
----
--
ANAC46
--------->
ANAC58
--------->
At4g35610
-----
-
LBD16
--------->
ANAC46
--------->
DEAR3(1)
<------
MYB83
-
NtERF2
--------->
ANAC58
--------->
ANAC46
---------->
DOF2
-->
LBD16
<-----------
GT1
--------->
MYB52(1)
<-------
GAMYB
<---------
MYB52(2)
<------
MYB46(1)
aagtttttgagtttgattttacaaaaacaaggagaagacgacggatgcacgacggagctcgttgtcttcgccgctaacggaactttcaaagctaggttcc
3271700
--------->
ANAC58
--------->
ANAC58
------>
ZmHOX2a(2)
<-------
TEIL
<------
ZmHOX2a(2)
<---------
ARR14(2)
--------->
ARR14(2)
--------->
ANAC58
<---------
TOE1(3)
---------->
DOF2
----->
LBD16
--------->
ATHB12
--------->
YAB1
<---------
TOE2(3)
<------
ZmHOX2a(1)
---->
HSFB2a(2)
--------->
ANAC58
--------->
WOX13(1)
--------->
CCA1(2)
<-------
cgattgtaagacggatgaatggacaaggatccat
ttcaatcgcaacgagtcaattagggtttttcagagagagacggaggaagagaaagagaaggaaatg
3271800
----------->
TGA1
--------->
CCA1(2)
----------->
HVH21
<------
ZmHOX2a(1)
<-----------------------
TaNAC69(2)
--------->
DAG2
--------->
DAG2
<---------
ARR14(2)
---------->
DOF2
---------->
DOF2
--------->
ARR14(2)
---------->
DOF2
--
--
GLK1(1)
<---------
TOE2(3)
<------
ZmHOX2a(1)
--------->
MYB59
--------->
At4g35610
tgaacaaaaagggtttaggaagagttcgacattaatggcaggaaccgttcaagagacgatgacttaggggaattaggcaaaggaaaaggaggtgacgacg
3271900
--------->
MYB52(1)
------>
MYB83
<---------
MYB111(1)
<---------
MYB59
--------->
ANAC46
--------->
ANAC58
--------->
ARR14(2)
<---------
ARR14(2)
<---------
ANAC46
--------->
ATERF1(1)
<------
NtERF2
--------->
AtMYB61
--------->
AHL20(2)
--------->
ANAC58
--------->
At4g35610
<----------
DOF2
<-----------
GT1
<---------
At4g35610
<------
NtERF2
--------->
RAP2.3(1)
<------
ZmHOX2a(1)
--------->
ANAC46
------>
NtERF2
<---------
MYB46(2)
--------->
ANAC58
<---------
RAP2.3(1)
--------->
ATHB12
------->
TEIL
--------->
ANAC58
<---------
DEAR3(1)
--------->
MYB46(3)
<---------
ANAC46
<--
-------->
DOF2
<-----------
RAV1(1)
------>
MYB46(1)
<----------
DOF2
*
TSS
------
ataaaacgcagcgttttaatggcgccgtattcacgacctaaccattggaggaagcagtcgtcttcttggtctttctgtgtatgtctctg
gtttttaagtg
3272000
------------>
CBF
--------->
ANAC58
----------------->
AGL1
--------->
ANAC46
=======================================================
MADS_MADS
--------->
ANAC58
--------------->
AGL15
--------->
At4g35610
----
--------->
ANAC58
<-----------------
AGL1
--------->
MYB52(2)
------------>
CBF
<------
--------->
ANAC58
---------->
ID1
<---------
MYB52(1)
<------------
CBF
---------
--------->
ANAC58
<-----------
GT1
<-----------
GT1
<---------
ANAC58
------>
ZmHOX2a(1)
<---------
YAB1
--------
ID1
--------->
YAB1
<-----------
GT1
<---------
ANAC58
--------->
TOE2(3)
--------->
ICU4
--->
ALFIN1
--------->
ANAC58
<-----------
GT1
<----------
DOF2
----------------->
AG
<----------
DOF2
gagacaaacaagcaagcacaatttacatttttcccatttttgcattccctcctttcgtttgctgtattttcctaaattgtccaattcgcctttattatac
3272100
------>
MYB46(1)
<---------
MYB111(1)
<---------
MYB59
--------->
MYB46(3)
<---------
MYB46(2)
--------------->
AtSPL8
--------->
MYB46(3)
<---------------
AtSPL8
--------->
ANAC58
<---------
YAB1
--------->
AHL20(2)
<---------
YAB1
--------->
REM1(1)
<----------
DOF2
------>
MYB83
<---------
DAG2
<---------
MYB52(1)
--------->
TOE2(3)
<---------
AHL20(2)
<----------
DOF2
<-------
GAMYB
----->
AtMYB61
--------->
AtMYB61
<----------
DOF2
--------->
AHL20(2)
<-------
TEIL
-----
GT1
--------------->
AtSPL3
---------->
ID1
--------->
TOE2(3)
--------->
ANAC58
------
>
YAB1
--------->
YAB1
--------->
TOE2(3)
<---------
DAG2
----------->
GT1
--------->
DEAR3(1)
cacaactttaatattggtaccaaacctttttaattttgttctttaatcccctttttcattaatatagacggttaagctacatccaccgatgaaaaaatca
3272200
--------->
KAN4(2)
<---------
KAN4(1)
<---------
YAB1
--------->
KAN4(1)
--------->
AHL20(2)
----------->
GT1
<----------
TaMYB80
<--
<---------
AHL20(2)
---------->
DOF2
------->
TEIL
--------->
YAB1
<---
--------->
ICU4
----------->
GT1
<---------
YAB1
<---------
ICU4
---------->
DOF2
--->
ATHB12
<-----------
GT1
--------->
ANAC46
------------>
MYB.PH3(2)
<---------
MYB52(1)
----
tttgaataatttttaattacattctataactataagtcatgttgtaaagagtttgttattagagcatgaatattccattattctctcataaaaaaagaat
3272300
<---------
REM1(1)
<---------
ANAC46
<---------
ATHB12
--------->
ICU4
----------->
GT1
<---------
ANAC58
---------->
ID1
<---------
ZAT18
--------->
YAB1
<---------
ANAC58
-------
AHL20(2)
--------->
ZAT18
<---------
MYB52(1)
----------
------
AHL20(2)
<---------
AHL20(2)
--------->
LBD16
--------->
YAB1
----->
AHL20(2)
<----------
DOF2
--------->
ATERF1(1)
<---------
LBD16
--------->
ICU4
taaatgagaaaatttgtccctaattcttttttatttcaagtagccccctaaattgtggctaaacatccggtaatcgtaacaatgatgtagattgggtaac
3272400
-
<------
-------
-------
<-------
--------
<--------
--------->
ANAC55(2)
<---------
ANAC55(2)
<---------
ANAC58
<---------
ANAC58
-----------
<-------
TEIL
<---------
ANAC46
<----------
--------->
ZAT2
--------------->
AGL15
<----------
--------->
At4g35610
--------->
AHL20(2)
<---------
ZAT2
<---------------
AGL15
<----------
DOF2
--------->
AHL20(2)
->
GT1
----------->
HVH21
<---------
TOE2(3)
<-----------
GT1
<---------
AHL20(2)
tctctgctcgaatgtgacgcttattttggcaaataatgtttctttggtaaacatttgaaagtttttaaacaatttgttttgagtatttaaaatacgtacg
3272500
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AGI:
At1g10020.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G29310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61535.1); contains InterPro domain Protein of unknown function DUF1005 (InterPro:IPR010410)
Range:
from: 3269606
to: 3271989
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.