Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <---------DAG2                                                          --------->TOE2(3)                                                        ------->TEIL                                                        -------->P                                                       <-----------GT1                                                      ------>ZmHOX2a(2)                                                     <------ZmHOX2a(2)         <---------ICU4                             <---------ARR11(3)   <---------At4g35610                              <---------ARR14(2)                 --------->At4g35610   --------->At4g35610                              --------->ARR14(2)                 <---------At4g35610  --------->GLK1(2)                                 <-----------ARR10                --------->DAG2 ------->ANAC58                                     --------->AGP1                  ---------->DOF2 ------->ANAC58                                     --------->ARR11(3)   --------->ANAC58 --->ANAC58       ---------->DOF2                   <---------AGP1       --------->ANAC58           - --->ANAC58   <---------YAB1                --------->ZAT6--------->TOE1(3) ---------->DOF2        <-   taagcatctgaacattactataaagaaaacagaacacaaattactaacaatacagatctaccttatacaataggcacttaatgccaaaaagctgattaga  1768300                                                                                             ------>MYB83                                                                                             --------                                                                                        <-----------GT1                                                                                     <---------YAB1   ---------->DOF2                       <---------ARR11(3)                         --------->AHL20(2) ---------->RAV1(1)            <---------GLK1(1)                             <---------WRKY18(1) ---------ID1 --------->AHL20(2)         --------->ARR11(3)                <---------WOX13(1)------>MYB46(1)   aacaacaaaggaagaattaaaccaaaaacatggaactctctaagttcttaagtgaaaaaactaagaaaaattgttagattgaccaatattataccaactt  1768400                                                                 ------->GAMYB                                                                <---------MYB52(2)                 --------->CCA1(2)                              --------->ANAC58                 --------->GLK1(1)                              --------->ANAC58                 <---------GLK1(1)          --------->ANAC58  --------->MYB52(1)                --------->ARR11(3)          --------->ANAC58--------->MYB46(3)                <---------ARR11(3)       <------ZmHOX2a(2) ------>MYB83  <---------GLK1(2)                <---------ARR14(2)      --------->ARR11(3) --------->AtLEC2                 ---------                --------->ARR14(2)     <---------At4g35610 ------>MYB46(1)                  <--------                --------->ARR11(1)     --------->bZIP60(1) --------->ANAC58            --------->ARR11(3)       <---------TOE2(3)               <---------bZIP60(1) --------->ANAC58            <---------ARR11(3) >P <---------WOX13(1)                 --------->At4g35610 --------->ANAC46          --------->ICU4   ggagagattgatgtataagatatgcgaagacttcaaatgtgagatcacgaattcaataaccaagcaacgaaacaaaattctctagtcaagatttagctaa  1768500                                                       <------ZmHOX2a(2)     <---------------AGL15                   --------->LBD16         --------->LBD16         --------     --------------->AGL15                  --------->ANAC46      <------ZmHOX2a(2)        <---------ANAC46     <---------MYB59   <---------ANAC58     --------->ANAC58     --------->AGP1            <---------ANAC58    ----------------->AGL2                  --------->ANAC58     --------->ARR11(3)        <---------ANAC58    ----------------->AGL3            <---------ANAC58<---------ARR14(2)        <---------HSFB2a(2)    ----------------->AG    ----------->GT1<---------LBD16--------->At4g35610   --------->HSFB2a(2)    ----------------->AGL1 <---------HSFB2a(2)   --------->AtLEC2<---------ARR14(2)       --------->STY1(2) --------->DOF5.7(2)   <---------ANAC58  -------->P  <---------At4g35610       ----------->GT1 >At4g35610       <---------ICU4      <---------ANAC58--------->ARR14(2)      <------ZmHOX2a(2) -At4g35610 --------->MYB59--------->HSFB2a(2) ---------->DOF2   --------->ARR14(2)       <---------STY1(2)   atcgttaccaaaattaggcataagtacttgtggaaaaaatgcttacccgcaatgcagatcagctatagatccagagagagatcgagaaaactagcttgtg  1768600                    <---------DAG2                <-----------GT1                                                                     -               <-----------GT1                                                                      -      ----------->RAV1(1)           ------>NtERF2                                                   -     --------->DREB2C(2)            --------->LBD16                                    --------->ZAT14     --------->At1g77200          <---------ANAC46                                   --------->ANAC46     ------->GAMYB  <----------DOF2--------->LBD16    --------->GLK1(2)            --------->ZAT6<---    --------->DEAR3(2)       --------->MYB52(2)      <---------GLK1(2)   <------ZmHOX2a(1)    *TSS <-    --------->MYB46(3)    <---------ANAC58     <------ZmHOX2a(1)      <------ZmHOX2a(1)<---------ZAT14 --->GT1    <---------ICU4<---------ANAC58   <---------TOE2(3)---------->DOF2>>>>>>>>>TBF1  ---------   aattcaaccgacaaaaattaccctttttgcttcgttgccgagaaaataaggaagagattcttgggaaagagaggaggaagaagaaacactaaactaaagc  1768700                                                                ----------->GT1                                                                <---------ANAC58                                                                <------MYB46(1)                                                                <------MYB83                                                                <---------ANAC58                                                                <---------ANAC46          --------->At4g35610                                  <---------AtMYB61          <---------At4g35610                                  --------->MYB46(2)      --------->ARR14(2)                             --------->ICU4                       --------->ANAC58      <---------ARR14(2)                             <---------YAB1                <---------MYB52(1)   <---------ANAC46                              --------->At5g28300          <-----------HVH21   --------->ANAC55(2)                          ------->GAMYB  --------->MYB52(2) <-------GAMYB   <---------ANAC55(2)                      <---------WRKY38(1)--------->MYB55(2)<---------MYB46(3) --------->MYB52(1)                        <---------ATHB12   <---------MYB55(1)<---------ANAC46===== ---------->TGA1                          --------->ANAC58   <---------MYB52(1) <---------At1g77200 ---------->HVH21                        --------->WOX13(1)<---------ANAC58   ------------>AtMYB77 -------->ALFIN1                       <---------KAN4(2)   <---------ANAC46  <-----------RAV1(1)----- ------MYB46(3)            <---------MYB52(1)--------->MYB52(1)<---------MYB46(3)<---------DEAR3(2) ----------HVH21     --------->MYB46(3)------------>CBF<------------CBF   ------->TEIL    --------->ANAC58 ->DOF2<------ZmHOX2a(2)--------->MYB46(3)--------->ANAC58 <---------ANAC58  ========================   gggtgacggatcagcagtctctatcaaccgttggattagagaacaatcaacggtgaagattgcgtttggtgtaatgtatgtgtcggttagacaagacagc  1768800                                                           --------->At4g35610                                                    <---------ALFIN1                                                   --------->At4g35610                                                  --------->RAP2.3(2)                                                  --------->DEAR3(1)                                                  --------->RAP2.6(2)                                                <---------At4g35610             --------->TCP15(1)                 --------->At4g35610             --------->TCP16(1)             <-----------HVH21             --------->PCF5                --------->MYB46(3)             <---------PCF2                ----------->HVH21             --------->ZAT18               --------->DREB2C(2)            <---------TCP23                --------->DEAR3(1)            ----------->TCP11(1)           --------->DEAR4(1)          <---------ANAC58         <---------HSFC1(2)      <---------At4g35610          <---------ANAC58         --------->ATERF1(1)     --------->ZAT2        <---------ANAC46      --------->ALFIN1--------->MYB46(3)                <---------ATHB12     <-----------RAV1(1)  --------->ZAT14  --------->At1g77200                 --------->MYB52(1)   <---------ANAC46  <---------ZAT14       ------->GAMYB  ----------->RAV1(1)  ------>MYB83   <---------ANAC58  --------->ZAT14      --------->DEAR3(2)    --------->GLK1(2)   <---------ANAC58 <----------DOF2<---------HSFB2a(1)--------->ANAC58         ------>MYB46(1)  <-------TEIL--------->PCF2<---------ANAC46----------->RAV1(1)<---------ARR14(2) ================RAV<---------DAG2 --------->HSFB2a(1)--------->ANAC58    <-----------GT1 ------>RAV1(2)  <---------ALFIN1  --------->HSFC1(2) --------->ANAC46  <---------AHL20(2) =======RAV<---------ZAT18<---------ZAT14 --------->MYB46(3)   --------->ARR14(2)   ctggttcgtgttgtgggccctactttactgaagtggagccttccaccgacagccgcacaccagcagaacctgatttaaaccaatcggtctacttcgattt  1768900                                                                                            ------>ZmHOX2a(1)                                                              ------------>CBF             <---------ANAC58                                                        ----------->TBP                    <---------ANAC58                                                      <---------HSFB2a(2)          <-----------HVH21                                    <----------DOF2   --------------->AGL15       ------>ZmHOX2a(1)                          >>>>>>>>>>>>>>>>>LFY        --------->HSFB2a(2)       <---------ANAC58                          <<<<<<<<<<<<<<<<<LFY        <---------------AGL15     <---------ANAC58               <-------TEIL  <------------CBF     <----------DOF2             <---------ARR14(2) <---   ttttcatgggttttcggttcatgttatggcccattgggcttttaagtaaggcctttctataaatgtcaattttgccagagtttcctgtctcgtccttgtc  1769000                                                                          --------->YAB1                                                                        --------->AtLEC2                                                                        --------->ANAC58                                                                        --------->ANAC58                                                                 --------->At4g35610                                                                 <---------ZAT2                                                              <------NtERF2                                                              --------->ATERF1(1)                                                             <-----------HVH21                                                             <-----------TGA1                                                            <---------ANAC46                                                            <---------ANAC58                                                            --------->bZIP60(1)                                                            <---------bZIP60(1)                                                            <---------ANAC58                         <----------DOF2          --------->At5g28300   --------->ANAC46               --------->ANAC46                  ----------->GT1 --------->ZAT2          <---------ALFIN1                      --------->ZAT6--------->TGA2(2)  ------>ZmHOX2a(1) <---------ALFIN1          ----------->RAV1(1)<---------At4g35610                - -------DOF2 *TSS <---------ALFIN1   <---------MYB52(1)     --------->TGA2(1)         <<<<<<<<<TBF1 =   tttcctctagccactcttcgccactctctttctctctcccttgttttccaacagtaacaatggcgtcagcttccaagcaaaacccttcttcttccaaacc  1769100                                                                                             --------                                                                                           --------->TGA2(2)                                                                                         --------->ANAC46                                                                                         --------->bZIP60(2)                                                                                         <---------bZIP60(1)                                                                                         <---------O2                              ------->GAMYB                                              --------->bZIP60(1)                             --------->MYB46(3)                                          --------->O2                            -------->P                                                  <-----------STF1                       <---------ANAC58                                               <---------ETT(2)                       <---------ANAC58                                               --------->ETT(2)                  --------->ATHB12                                                    --------->DEAR3(1)                  <---------ICU4           --------->LBD16                            <---------DEAR3(1)                 <------ZmHOX2a(2)       <---------LBD16                            <-----------HVH21                 <---------YAB1        <---------ARR14(2)                --------->TOE1(3)<---------- ----->ZmHOX2a(1)<---------ATHB12      --------->ARR14(2)--------->GLK1(1)     <-----------GT1    --- =======================HOX2a_HOX2a   <---------GLK1(1)<------ZmHOX2a(1) --------->TOE2(3)<----------   tcctaggcatccatctccgatcattgcttcaaccccctcgaaatccggtgtattggaggaatcccaatttcgaaaccctaataacccgtcgacgtcatcg  1769200  Previous    Next  AGI:  At1g05850.1    Description:  POM1 (POM-POM1); chitinase. similar to chitinase [Arabidopsis thaliana] (TAIR:AT3G16920.1); similar to chitinase [Brassica rapa] (GB:ABV89660.1); contains InterPro domain Endochitinase (InterPro:IPR016283); contains InterPro domain Glycoside hydrolase, family 19, catalytic; (InterPro:IPR000726) Range:  from: 1766502    to: 1768694    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g05860.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G31600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64768.1) Range:  from: 1769013    to: 1771114    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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