Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<---------
DAG2
--------->
TOE2(3)
------->
TEIL
-------->
P
<-----------
GT1
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
ICU4
<---------
ARR11(3)
<---------
At4g35610
<---------
ARR14(2)
--------->
At4g35610
--------->
At4g35610
--------->
ARR14(2)
<---------
At4g35610
--------->
GLK1(2)
<-----------
ARR10
--------->
DAG2
------->
ANAC58
--------->
AGP1
---------->
DOF2
------->
ANAC58
--------->
ARR11(3)
--------->
ANAC58
--->
ANAC58
---------->
DOF2
<---------
AGP1
--------->
ANAC58
-
--->
ANAC58
<---------
YAB1
--------->
ZAT6
--------->
TOE1(3)
---------->
DOF2
<-
taagcatctgaacattactataaagaaaacagaacacaaattactaacaatacagatctaccttatacaataggcacttaatgccaaaaagctgattaga
1768300
------>
MYB83
--------
<-----------
GT1
<---------
YAB1
---------->
DOF2
<---------
ARR11(3)
--------->
AHL20(2)
---------->
RAV1(1)
<---------
GLK1(1)
<---------
WRKY18(1)
---------
ID1
--------->
AHL20(2)
--------->
ARR11(3)
<---------
WOX13(1)
------>
MYB46(1)
aacaacaaaggaagaattaaaccaaaaacatggaactctctaagttcttaagtgaaaaaactaagaaaaattgttagattgaccaatattataccaactt
1768400
------->
GAMYB
<---------
MYB52(2)
--------->
CCA1(2)
--------->
ANAC58
--------->
GLK1(1)
--------->
ANAC58
<---------
GLK1(1)
--------->
ANAC58
--------->
MYB52(1)
--------->
ARR11(3)
--------->
ANAC58
--------->
MYB46(3)
<---------
ARR11(3)
<------
ZmHOX2a(2)
------>
MYB83
<---------
GLK1(2)
<---------
ARR14(2)
--------->
ARR11(3)
--------->
AtLEC2
---------
--------->
ARR14(2)
<---------
At4g35610
------>
MYB46(1)
<--------
--------->
ARR11(1)
--------->
bZIP60(1)
--------->
ANAC58
--------->
ARR11(3)
<---------
TOE2(3)
<---------
bZIP60(1)
--------->
ANAC58
<---------
ARR11(3)
>
P
<---------
WOX13(1)
--------->
At4g35610
--------->
ANAC46
--------->
ICU4
ggagagattgatgtataagatatgcgaagacttcaaatgtgagatcacgaattcaataaccaagcaacgaaacaaaattctctagtcaagatttagctaa
1768500
<------
ZmHOX2a(2)
<---------------
AGL15
--------->
LBD16
--------->
LBD16
--------
--------------->
AGL15
--------->
ANAC46
<------
ZmHOX2a(2)
<---------
ANAC46
<---------
MYB59
<---------
ANAC58
--------->
ANAC58
--------->
AGP1
<---------
ANAC58
----------------->
AGL2
--------->
ANAC58
--------->
ARR11(3)
<---------
ANAC58
----------------->
AGL3
<---------
ANAC58
<---------
ARR14(2)
<---------
HSFB2a(2)
----------------->
AG
----------->
GT1
<---------
LBD16
--------->
At4g35610
--------->
HSFB2a(2)
----------------->
AGL1
<---------
HSFB2a(2)
--------->
AtLEC2
<---------
ARR14(2)
--------->
STY1(2)
--------->
DOF5.7(2)
<---------
ANAC58
-------->
P
<---------
At4g35610
----------->
GT1
>
At4g35610
<---------
ICU4
<---------
ANAC58
--------->
ARR14(2)
<------
ZmHOX2a(2)
-
At4g35610
--------->
MYB59
--------->
HSFB2a(2)
---------->
DOF2
--------->
ARR14(2)
<---------
STY1(2)
atcgttaccaaaattaggcataagtacttgtggaaaaaatgcttac
ccgcaatgcagatcagctatagatccagagagagatcgagaaaactagcttgtg
1768600
<---------
DAG2
<-----------
GT1
-
<-----------
GT1
-
----------->
RAV1(1)
------>
NtERF2
-
--------->
DREB2C(2)
--------->
LBD16
--------->
ZAT14
--------->
At1g77200
<---------
ANAC46
--------->
ANAC46
------->
GAMYB
<----------
DOF2
--------->
LBD16
--------->
GLK1(2)
--------->
ZAT6
<---
--------->
DEAR3(2)
--------->
MYB52(2)
<---------
GLK1(2)
<------
ZmHOX2a(1)
*
TSS
<-
--------->
MYB46(3)
<---------
ANAC58
<------
ZmHOX2a(1)
<------
ZmHOX2a(1)
<---------
ZAT14
--->
GT1
<---------
ICU4
<---------
ANAC58
<---------
TOE2(3)
---------->
DOF2
>>>>>>>>>
TBF1
---------
aattcaaccgacaaaaattaccctttttgcttcgttgccgagaaaataaggaagagattcttgggaaagagaggaggaagaagaaacactaaac
taaagc
1768700
----------->
GT1
<---------
ANAC58
<------
MYB46(1)
<------
MYB83
<---------
ANAC58
<---------
ANAC46
--------->
At4g35610
<---------
AtMYB61
<---------
At4g35610
--------->
MYB46(2)
--------->
ARR14(2)
--------->
ICU4
--------->
ANAC58
<---------
ARR14(2)
<---------
YAB1
<---------
MYB52(1)
<---------
ANAC46
--------->
At5g28300
<-----------
HVH21
--------->
ANAC55(2)
------->
GAMYB
--------->
MYB52(2)
<-------
GAMYB
<---------
ANAC55(2)
<---------
WRKY38(1)
--------->
MYB55(2)
<---------
MYB46(3)
--------->
MYB52(1)
<---------
ATHB12
<---------
MYB55(1)
<---------
ANAC46
=====
---------->
TGA1
--------->
ANAC58
<---------
MYB52(1)
<---------
At1g77200
---------->
HVH21
--------->
WOX13(1)
<---------
ANAC58
------------>
AtMYB77
-------->
ALFIN1
<---------
KAN4(2)
<---------
ANAC46
<-----------
RAV1(1)
-----
------
MYB46(3)
<---------
MYB52(1)
--------->
MYB52(1)
<---------
MYB46(3)
<---------
DEAR3(2)
----------
HVH21
--------->
MYB46(3)
------------>
CBF
<------------
CBF
------->
TEIL
--------->
ANAC58
->
DOF2
<------
ZmHOX2a(2)
--------->
MYB46(3)
--------->
ANAC58
<---------
ANAC58
========================
gggtgacggatcagcagtctctatcaaccgttggattagagaacaatcaacggtgaagattgcgtttggtgtaatgtatgtgtcggttagacaagacagc
1768800
--------->
At4g35610
<---------
ALFIN1
--------->
At4g35610
--------->
RAP2.3(2)
--------->
DEAR3(1)
--------->
RAP2.6(2)
<---------
At4g35610
--------->
TCP15(1)
--------->
At4g35610
--------->
TCP16(1)
<-----------
HVH21
--------->
PCF5
--------->
MYB46(3)
<---------
PCF2
----------->
HVH21
--------->
ZAT18
--------->
DREB2C(2)
<---------
TCP23
--------->
DEAR3(1)
----------->
TCP11(1)
--------->
DEAR4(1)
<---------
ANAC58
<---------
HSFC1(2)
<---------
At4g35610
<---------
ANAC58
--------->
ATERF1(1)
--------->
ZAT2
<---------
ANAC46
--------->
ALFIN1
--------->
MYB46(3)
<---------
ATHB12
<-----------
RAV1(1)
--------->
ZAT14
--------->
At1g77200
--------->
MYB52(1)
<---------
ANAC46
<---------
ZAT14
------->
GAMYB
----------->
RAV1(1)
------>
MYB83
<---------
ANAC58
--------->
ZAT14
--------->
DEAR3(2)
--------->
GLK1(2)
<---------
ANAC58
<----------
DOF2
<---------
HSFB2a(1)
--------->
ANAC58
------>
MYB46(1)
<-------
TEIL
--------->
PCF2
<---------
ANAC46
----------->
RAV1(1)
<---------
ARR14(2)
================
RAV
<---------
DAG2
--------->
HSFB2a(1)
--------->
ANAC58
<-----------
GT1
------>
RAV1(2)
<---------
ALFIN1
--------->
HSFC1(2)
--------->
ANAC46
<---------
AHL20(2)
=======
RAV
<---------
ZAT18
<---------
ZAT14
--------->
MYB46(3)
--------->
ARR14(2)
ctggttcgtgttgtgggccctactttactgaagtggagccttccaccgacagccgcacaccagcagaacctgatttaaaccaatcggtctacttcgattt
1768900
------>
ZmHOX2a(1)
------------>
CBF
<---------
ANAC58
----------->
TBP
<---------
ANAC58
<---------
HSFB2a(2)
<-----------
HVH21
<----------
DOF2
--------------->
AGL15
------>
ZmHOX2a(1)
>>>>>>>>>>>>>>>>>
LFY
--------->
HSFB2a(2)
<---------
ANAC58
<<<<<<<<<<<<<<<<<
LFY
<---------------
AGL15
<---------
ANAC58
<-------
TEIL
<------------
CBF
<----------
DOF2
<---------
ARR14(2)
<---
ttttcatgggttttcggttcatgttatggcccattgggcttttaagtaaggcctttctataaatgtcaattttgccagagtttcctgtctcgtccttgtc
1769000
--------->
YAB1
--------->
AtLEC2
--------->
ANAC58
--------->
ANAC58
--------->
At4g35610
<---------
ZAT2
<------
NtERF2
--------->
ATERF1(1)
<-----------
HVH21
<-----------
TGA1
<---------
ANAC46
<---------
ANAC58
--------->
bZIP60(1)
<---------
bZIP60(1)
<---------
ANAC58
<----------
DOF2
--------->
At5g28300
--------->
ANAC46
--------->
ANAC46
----------->
GT1
--------->
ZAT2
<---------
ALFIN1
--------->
ZAT6
--------->
TGA2(2)
------>
ZmHOX2a(1)
<---------
ALFIN1
----------->
RAV1(1)
<---------
At4g35610
-
-------
DOF2
*
TSS
<---------
ALFIN1
<---------
MYB52(1)
--------->
TGA2(1)
<<<<<<<<<
TBF1
=
tttcctctagcc
actcttcgccactctctttctctctcccttgttttccaacagtaaca
atggcgtcagcttccaagcaaaacccttcttcttccaaacc
1769100
--------
--------->
TGA2(2)
--------->
ANAC46
--------->
bZIP60(2)
<---------
bZIP60(1)
<---------
O2
------->
GAMYB
--------->
bZIP60(1)
--------->
MYB46(3)
--------->
O2
-------->
P
<-----------
STF1
<---------
ANAC58
<---------
ETT(2)
<---------
ANAC58
--------->
ETT(2)
--------->
ATHB12
--------->
DEAR3(1)
<---------
ICU4
--------->
LBD16
<---------
DEAR3(1)
<------
ZmHOX2a(2)
<---------
LBD16
<-----------
HVH21
<---------
YAB1
<---------
ARR14(2)
--------->
TOE1(3)
<----------
----->
ZmHOX2a(1)
<---------
ATHB12
--------->
ARR14(2)
--------->
GLK1(1)
<-----------
GT1
---
=======================
HOX2a_HOX2a
<---------
GLK1(1)
<------
ZmHOX2a(1)
--------->
TOE2(3)
<----------
tcctaggcatccatctccgatcattgcttcaaccccctcgaaatccggtgtattggaggaatcccaatttcgaaaccctaataacccgtcgacgtcatcg
1769200
Previous
Next
AGI:
At1g05850.1
Description:
POM1 (POM-POM1); chitinase. similar to chitinase [Arabidopsis thaliana] (TAIR:AT3G16920.1); similar to chitinase [Brassica rapa] (GB:ABV89660.1); contains InterPro domain Endochitinase (InterPro:IPR016283); contains InterPro domain Glycoside hydrolase, family 19, catalytic; (InterPro:IPR000726)
Range:
from: 1766502
to: 1768694
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At1g05860.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G31600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64768.1)
Range:
from: 1769013
to: 1771114
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.