Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
----------->
RAV1(1)
----------->
RAV1(1)
--------->
ANAC58
--------->
HSFB2a(2)
--------->
ANAC58
<----------
DOF2
---------->
DOF2
---------->
DOF2
<---------
DAG2
------------------------>
ANAC81
---------->
DOF2
<------
ZmHOX2a(1)
--------
ZAT18
--------->
REM1(1)
--------->
ANAC58
<---------
TOE1(3)
<--
------->
ZAT18
--------->
MYB46(3)
--------->
ANAC58
<---------
TOE2(3)
--------->
ATHB12
gtctactactttctgcaacaacaaaacaaaaaaactaaaaccaagaaaagccccaaaagattaccacaaattaaggaaacttaaagcccattgatttcaa
63400
--------------->
AGL15
<---------------
AGL15
<----------
DOF2
<-----------------
AGL3
<-----------------
AGL2
--------->
AHL20(2)
--------->
ATHB51
<---------
HSFC1(2)
<---------
ICU4
--------->
HSFB2a(1)
<---------
AHL20(2)
<---------
WOX13(1)
<---------
HSFB2a(1)
-------->
ATHB1
----------->
HVH21
--------->
LBD16
--------->
At4g35610
<---------
ZAT14
<---------------------
WRI1
<--------
HAHB4
-----
--------->
ZAT14
<-----------
GT1
------->
TEIL
--------->
HSFC1(2)
<---------
ATHB51
------
<---------
GLK1(1)
---------->
ID1
<---------
At4g35610
--------->
ICU4
<-----
--------->
GLK1(1)
--------->
TOE2(3)
<-----------
HVH21
<---------
ARR11(3)
----------
------->
GAMYB
<---------
YAB1
<---------
ANAC58
<---------
LBD16
--------->
ARR11(3)
---------->
DOF2
-------
ARR11(3)
<----------
DOF2
<---------
ANAC58
--------->
At4g35610
<---------
ATHB12
<------
catctcaacagagctctgactttgattaac
cttgttgtcttgttgaaccttgtcaccggagtttccaaggagagcttcaattatttctttaaaaggaata
63500
<-
<-
--
--
<--
---
--------->
ANAC46
<----
----------->
HVH21
<--
--------->
TOE1(2)
------
--------->
YAB1
<-----
--------->
ANAC58
<------
------>
MYB83
<---------
LBD16
----
------>
MYB46(1)
---------
--------->
ANAC46
<-------
TEIL
<
--------->
ANAC58
=============
<----------
DOF2
--------->
AtMYB61
------>
ZmHOX2a(2)
---->
KAN4(2)
<---------
ANAC58
<----------
DOF2
--------->
ABI4(1)
==============
--->
KAN4(1)
<----------
DOF2
<---------
ANAC58
<---------
ALFIN1
<------
ZmHOX2a(2)
----
KAN4(1)
<----------
DOF2
<---------
ANAC58
--------->
DEAR3(1)
--------->
ARR14(2)
->
GT1
<------------------------
ANAC81
<----------
DOF2
--------->
MYB46(3)
<---------
ARR14(2)
---
KAN4(2)
<----------
DOF2
<---------
ANAC58
<---------
ANAC46
------>
NtERF2
--------->
SPL7
<-------
atctcttctttctctttctctttctctttcttgttcttgttctttcttccgtctactttccatttgccaccaccccattcatacgacggatccatccacg
63600
<---------
ALFIN1
------->
GAMYB
<---------
ALFIN1
----------->
RAV1(1)
--------
RAP2.3(1)
--------
ATERF1(1)
------->
RAP2.6(2)
---->
NtERF2
-------
ATERF1(2)
------>
ATERF1(2)
-----
ATERF1(1)
--------->
LBD16
<---------
MYB52(1)
-------
DEAR3(1)
<---------
LBD16
<----------
DOF2
--->
ANAC46
--------->
O2
============================
----
DEAR3(1)
<---------
ALFIN1
------>
ZmHOX2a(2)
---
LBD16
------>
NtERF2
<-------
TEIL
<-------
GAMYB
----->
RAP2.6(3)
--------->
DEAR3(1)
<---------
ANAC58
--------->
ARR14(1)
--
>
MYB46(3)
--------->
ANAC46
<------
NtERF2
--------->
ARR14(2)
<-------
------
NtERF2
--------->
ANAC46
------>
NtERF2
--------->
ARR11(1)
<-------
==================
HOX2a_HOX2a
--------->
DEAR3(1)
<---------
GLK1(2)
--------
==================
HOX2a_HOX2a
--------->
DEAR3(2)
----------->
ARR10
=======================
--
ALFIN1
------>
ZmHOX2a(1)
--------->
SPL7
<---------
ANAC58
<---------
ARR14(2)
------>
ZmHOX2a(2)
gcggcaacaccctcctcgcagccacttctccggatgccgacgctgtttccttgtctgaaaccctagattcgatctctttcggttgattcgatctcgcgta
63700
<---------
ANAC46
<---------
bZIP60(2)
<---------
REM1(2)
<-----------------------
TaNAC69(2)
--------->
ZAT14
--------->
GLK1(2)
<---------
ARR14(2)
<---------
ZAT14
<---------
GLK1(2)
----------->
GT1
--------->
ARR11(3)
<---------
ARR14(2)
<------
ZmHOX2a(1)
--------->
GLK1(2)
--------->
ARR14(2)
<---------
ANAC46
<---------
ARR11(3)
=====================
bZIP_DOF
--------->
HSFB2a(2)
--------->
ANAC58
<xxxxxx
------->
YAB1
--------->
ALFIN1
<---------
HSFB2a(2)
--------->
MYB46(3)
--------->
GLK1(2)
--
ANAC55(2)
<---------
O2
<---------
LBD16
<---------
ATHB12
--------->
ARR14(2)
--
ANAC46
<---------
ZAT14
--------->
GLK1(2)
--------->
At4g35610
<---------
GLK1(2)
------->
TEIL
->
ANAC55(2)
<---------
TGA1a
<---------
GLK1(2)
--------->
ALFIN1
--------->
ANAC58
<---------
ARR14(2)
=====================
MYC_MYB
<---------
YAB1
--------->
LBD16
--------->
WOX13(1)
<---------
ALFIN1
-----
atcagattctggtgaagtgggaacagaaaccattacgattctttcttccggaggaggtgaatcccaatcacccaaaatctctacactctctgaatctgaa
63800
<---------
ANAC58
<------
--------->
ANAC55(2)
--------
<---------
ANAC58
--------->
ANAC58
<-----------
GT1
<----------
DOF2
--------->
ANAC58
xxxxxxxxxx
smallRNA(si3)
<---------
DAG2
--------->
ATHB12
--------->
ANAC46
-->
TEIL
--------->
TOE2(3)
<----------
DOF2
<---------
MYB46(3)
------->
GAMYB
--
cgtttctccat
tcttaaaaactttggaatgcgaaatttgcgactttatgggctttacgggctgtttgatttgaaagattagacaactcacacaacttatt
63900
--------->
At4g35610
<------
MYB83
<------
MYB46(1)
<---------
TOE1(3)
<---------
TOE2(3)
--------->
MYB52(1)
------>
ZmHOX2a(1)
<---------
YAB1
<---------
DOF5.7(2)
<---------
ALFIN1
------------>
CBF
<-----------
GT1
-------->
P
<-----------
HVH21
<-----
<---------
MYB52(2)
--------->
MYB46(3)
<-----------
TGA1
<---------
ZAT14
<-----
--------->
WOX13(1)
--------->
AtMYB61
--------->
ANAC46
--------------->
AtSPL3
<-----
------
CBF
<---------
AtMYB61
------>
MYB83
--------->
AtMYB61
--------------->
AtSPL8
<------
->
ATHB12
<---------
MYB52(1)
------>
MYB46(1)
--------->
MYB46(3)
----------->
HVH21
<---------
DAG2
---------->
CBF
<---------
At4g35610
<-----------
GT1
--------->
ALFIN1
<----------
DOF2
gggcaattaacgttggtctgctcaacaccaactcctcactagaaaccactccgtcatcaatgtgtgactgtacatcaaaataaaactttttttttttggt
64000
-------->
ATHB1
------>
ZmHOX2a(2)
--------->
YAB1
<------
ZmHOX2a(2)
<---------
YAB1
<---------
ARR14(2)
<---------
ATHB12
<---------
AGP1
<--------
ATHB1
--------->
AGP1
--------->
YAB1
--------->
YAB1
<---------
ARR11(3)
<---------
ICU4
<---------
CCA1(2)
-------->
HAHB4
----
ANAC58
<---------
TOE2(3)
<---------
ATHB51
--
GAMYB
--------->
ARR11(3)
--------->
ICU4
<-----------
RAV1(1)
----
ANAC58
<---------
At4g35610
--------->
YAB1
<------------
CBF
<-----------
GT1
---
MYB46(3)
------->
TEIL
<----------
DOF2
<------------
CBF
----------->
GT1
<------------
CBF
-
tgcaaacgtagatctatgtagctaagataacctctctttaataattctatcattgtgttttccaaattgttatatatgttgtgtcattgtaacgcgttgc
64100
<---------
ZAT2
<---------
At4g35610
<----------
ID1
--------->
ANAC46
--------->
DAG2
--------->
ZAT14
--------->
At4g35610
<---------
WOX13(1)
<---------
WOX13(1)
--------->
DOF2
<-----------
GT1
--------->
ZAT2
<---------
MYB59
<----------
DOF2
cataaagcgacaacatcgttgcaactttcaactatactcaaatagccagcttgcagagtattttt
tgcctaattgaattgtttgaactttgatttatagg
64200
--------->
TOE2(3)
-------->
P
------->
TEIL
------>
ZmHOX2a(2)
<---------
ARR11(3)
--------->
ARR11(3)
>>>>>>>
ZML2
--
<-----------
RAV1(1)
--------->
YAB1
<---------
ALFIN1
<---------
<------
ZmHOX2a(1)
--------->
TOE2(2)
<---------
ZAT18
<----------
DOF2
<---------
TOE2(3)
-------->
P
----------------------->
TaNAC69(2)
---------->
ID1
tttcaaaccgagtttgaggatgatcacatatgtggctattgactaacctatggtgatctacctctatagaccacttctagttctagtttggctcttttgt
64300
Previous
Next
AGI:
At1g01130.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G47170.1); contains domain CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATED (PTHR22982); contains domain CBL-INTERACTING PROTEIN KINASE-RELATED (PTHR22982:SF45)
Range:
from: 61963
to: 63811
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At1g01140.1
Description:
CIPK9 (CBL-INTERACTING PROTEIN KINASE 9); kinase. similar to CIPK23 (CBL-INTERACTING PROTEIN KINASE 23), kinase [Arabidopsis thaliana] (TAIR:AT1G30270.2); similar to CIPK23 (CBL-INTERACTING PROTEIN KINASE 23), kinase [Arabidopsis thaliana] (TAIR:AT1G30270.1); similar to CBL-interacting protein kinase 12 [Populus trichocarpa] (GB:ABJ91219.1); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threon
Range:
from: 64166
to: 67625
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version